SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene6518

Length: 1746 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene6518

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxidase 1 n=1 Tax=Artemisia annua RepID=Q84UA9_ARTAN	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	Identity
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3	Plant peroxidase	IPR000823	-	-
Sma3	Peroxidase, active site	IPR019794	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G37530.1	Peroxidase superfamily protein chr4:17634786-17636082 FORWARD LENGTH=329	64%
RefSeq	Arabidopsis thaliana	NP_195469.1	peroxidase 51 [Arabidopsis thaliana]	64%
RefSeq	Populus trichocarpa	XP_002328876.1	predicted protein [Populus trichocarpa]	65%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NMN9

Fln msg:

Fln protein: MGSKKSARKPLELAGFVIWVLLGLCVSNGSAQLSENFYAKICPNVESIVRNVVSQKFTQTFVTVPGTLRLFFHDCFVEGCDASVIIQSTSNNTAEKDFSDNLSLAGDGFDTVIKAKQAVEKVCPNSVSCADILTMAARDVVALAGGPQFNVELGRRDGLISQASRVNGNLPKASFTLNQLNFLFARKGLSQTDMVALSGAHTLGFSHCNQFANRIYSFSASTPVDPSLNASYATQLQQMCPQNVDPTIAVNIDPTTPRKFDNVYYQNLQSGKGLFSSDEVLYTDLRTRNAVNKFAQSSDTFNTAFVSAMRNLGRVDVKTGFQGEIRQDCSRFN*

Protein Length: 335

Fln nts: ATGGGGACACTTGCTTGTTTTTAATTACAAAGCCGTCTTTGCAAGCGTGGATACGCGTAAACCACTGTTGCAGATGGTATCATATACATTTGCAAGAGTGGATCGAGATCGTTCATGTGACATAGGGAGAATGCTGGGGTGTTATCCACCTAAATTTGACTCATGTTTTGTTTGATCCAGCCATTAGATTCCAGCCACCAGCCCCAAACTTTTTCATTCATTGTTATATAGAGAGGTATGCAGGTTTGTGCGTAATACAGTAGGCCAGGGGCTCTTATCTTGTGAGTTCTCAGATAAGATATTGTC_-_ATGGGTTCAAAAAAATCTGCTAGGAAGCCATTGGAATTGGCTGGATTCGTCATTTGGGTATTGTTAGGGCTGTGTGTAAGCAATGGATCAGCTCAACTTAGTGAGAATTTTTATGCAAAAATCTGTCCCAATGTTGAATCCATTGTAAGGAATGTTGTTTCTCAAAAGTTTACCCAGACATTTGTGACAGTTCCTGGCACATTACGACTCTTCTTCCATGATTGCTTTGTTGAGGGATGTGATGCTTCAGTGATCATTCAGTCTACATCAAACAACACTGCTGAGAAAGATTTTTCGGACAACTTGTCATTAGCTGGTGATGGATTTGATACTGTCATCAAGGCCAAGCAAGCCGTAGAGAAAGTGTGCCCCAACAGCGTGTCTTGTGCTGATATCCTAACCATGGCTGCCAGAGATGTTGTAGCATTGGCTGGAGGCCCACAATTCAATGTGGAGTTAGGGCGACGAGATGGATTGATATCCCAAGCCTCTAGAGTCAATGGAAACCTGCCAAAGGCTTCATTCACTCTCAACCAACTAAACTTTCTATTTGCAAGGAAGGGTTTGAGTCAAACAGATATGGTAGCTCTATCTGGAGCCCACACTCTGGGATTCTCTCACTGCAACCAATTTGCAAACAGAATCTACAGTTTCAGTGCTAGTACACCCGTGGATCCAAGTCTGAATGCGTCCTATGCTACTCAACTTCAACAGATGTGCCCTCAGAACGTGGACCCGACCATTGCTGTTAACATAGATCCCACAACTCCCCGCAAATTCGATAACGTTTATTACCAGAATTTACAGTCTGGGAAGGGGCTTTTCTCATCTGACGAGGTTCTATACACAGACCTGCGCACACGAAATGCTGTAAACAAATTTGCTCAGAGTTCAGATACGTTTAACACGGCCTTCGTGAGTGCCATGAGGAACTTGGGGCGTGTGGACGTGAAGACGGGATTTCAGGGCGAGATCAGACAAGATTGCAGCCGATTTAACTAA___TCCTACCGGACCTGCATTGCGTTGCATTTATTCTTTTGTATTTTCTATGGGAGTTAGTGGAACGAGACAATGGCAGTTGCTTCTTTCCTTTTCATTTCTCAATAATCCCCGCCGTCTGCTGGGGTAGGTGGTTTCTGTGTAGCGTTCATTCATTGCGTTAGGCTGTGCTCAAAAGACGTGCAATTACCATTGGGTTGTGCTCAAAAGACGTGCAATTACCATTAACTAATAAAGTATGGAAACCATACTTTATCCATTGGATTTTGAATGTTTGGCAATCATATAAAACTGAAGAACATGTTTTTTTAAACTATACTGTATAATGACATCATAGAACGGCAATGAGTTGGTGGTGTGGTTGTTCAACTGTATATTTCTGCATTGCTTCCTATTCCAATTCGGAAACCAATTCGGAATCCAGACAGTTGTATTGCAATA

Fln Alignment:

Contig6518___MGSKKSARKPLELAGFVIWVLLGLCVSNGSAQLSENFYAKICPNVESIVRNVVSQKFTQTFVTVPGTLRLFFHDCFVEGCDASVIIQSTSNNTAEKDFSDNLSLAGDGFDTVIKAKQAVEKVCPNSVSCADILTMAARDVVALAGGPQFNVELGRRDGLISQASRVNGNLPKASFTLNQLNFLFARKGLSQTDMVALSGAHTLGFSHCNQFANRIYSFSASTPVDPSLNASYATQLQQMCPQNVDPTIAVNIDPTTPRKFDNVYYQNLQSGKGLFSSDEVLYTDLRTRNAVNKFAQSSDTFNTAFVSAMRNLGRVDVKTGFQGEIRQDCSRFN
A9NMN9______________MGSKKSARKPLELAGFVVWVLLGLCVSKGSAQLKENFYAKICPNVESIVRNAVSQKFSQTFVTVPGTLRLFFHDCFVEGCDASVIIQSTSNNTAEKDFSDNLSLAGDGFDTVVKAKQAVEKVCPNTVSCADILTMAARDVVALAGGPQFNVELGRRDGLISQASRVSGNLPKASFTLNQLNFLFASKGLSQTDMVALSGAHTLGFSHCNQISNRIYSFSASTPVDPSLNPSYATQLQQMCPKNVDPTIAINIDPTTPRQFDNVYYQNLQSGKGLFSSDEVLYTDLRTRNAVNTFAQSSGAFNTAFVNAMRNLGRVGVKTGFQGEIRQDCSRFN

SNPs (tot: 3)

Position	A %	G %	Probability
1183	81	18	0.999994
1516	75	25	0.996473
1518	75	25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain