SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene6098

Length: 1559 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene6098

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	uncharacterized protein [Arabidopsis thaliana] gb\|AAD55506.1\|AC008148_16 Unknown protein [Arabidopsis thaliana] gb\|AAK93674.1\| unknown protein [Arabidopsis thaliana] gb\|AAL85049.1\| unknown protein [Arabidopsis thaliana] gb\|AEE35137.1\| uncharacterized prot	-	-	0.0	51%
FL-Next	tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).	-	-	0.0	55%

Source	Gene names
Sma3	At1g23110; At1g70900; F15H11.13; GSVIVT00030508001; GSVIVT00034630001; OJ1294_G06.16; Os08g0433200; OsI_29336; OsI_31337; OsJ_27426; OsJ_29331; P0431A03.17; PHYPADRAFT_122872; POPTRDRAFT_803610; POPTRDRAFT_822079; RCOM_0843790; VITISV_036885;

Source	GOs	Term	Type	Identity
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G70900.1	" unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:	55%
RefSeq	Arabidopsis thaliana	NP_565005.1	uncharacterized protein [Arabidopsis thaliana]	55%
RefSeq	Populus trichocarpa	XP_002314801.1	predicted protein [Populus trichocarpa]	55%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: D7KYF9

Fln msg:

Fln protein: MGAQRRSRQPRPLRGLHGVQLVHHTSFQQKLPSEGGFQLSNNVNSEAPVDDRRLSMQFEDNDNLKISGTTWPHHHLRRIWQMRPGCFRSVVQCSHLGDQSLAETTANVLTSIPFIFLGIQAPRRRLSDMLYANSLVGVGVASSLYHTSRGEVRKVFRWADYAMIATTAVCLSTAIRDDNPKLLMAASAVLLPFQPLLVSAVHTGMMEVAFAKRVVSEPELRKAHDLHKASSVVGAAFFIADDLFPRTPYLHAAWHLAAAVGVATCNKLLK*

Protein Length: 272

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATCTATTTTCATAAGAGGGAGCGAGGGCGTGGGAGATTCTCCAGCGAACCAAGGAATATGCTCACTGGGCATAATATGAATCCTCCCTCGGTTCTCCTTGTCTCATTGGCATCGTGCTAGTGATATGTTCAGGGGACCTCATGGATGGCTGAGGCTACCCCTCCTCCTGCAGCAAACTAACAATTCTATCGAACGTCTATTCTGTGGACTAGAGTTTGAATGGCATCCCCAAGCATTGCGTACTTCGAAAAGAGAGCTACACTAGTGCAACTTCAAACCTTCTCCATAATATGTTCCTTTTGATGGCACTAAGTATTTACTTTAGACGGGAATACACACATGAAAAGGACAGCGCATACTTCATATTAGCTAGGGGTTCACTTGAATTTGTTGACACTACAACCCTGTAA_-_ATGGGGGCCCAGAGAAGATCAAGGCAACCGAGACCATTAAGGGGTCTCCATGGAGTACAGTTGGTGCATCATACATCTTTCCAGCAAAAGCTTCCTTCAGAGGGGGGCTTTCAACTTTCAAACAACGTGAATTCTGAGGCTCCTGTTGATGATAGAAGATTGTCAATGCAGTTTGAAGATAATGATAACTTGAAAATTTCTGGGACTACTTGGCCTCATCATCATTTGAGAAGGATCTGGCAAATGAGGCCGGGATGCTTTAGATCTGTTGTGCAATGCAGTCATCTAGGTGATCAGAGTTTGGCCGAGACTACAGCCAATGTGTTAACTTCTATTCCTTTCATCTTCCTTGGAATCCAGGCCCCAAGGAGAAGACTAAGTGACATGCTTTATGCAAATTCCTTGGTTGGTGTTGGTGTTGCTTCTAGTTTGTACCATACTTCAAGAGGAGAAGTCAGAAAAGTATTTAGATGGGCAGATTATGCTATGATTGCTACTACCGCAGTTTGTTTGTCGACAGCAATAAGGGATGACAACCCAAAATTGTTGATGGCAGCATCTGCTGTGCTACTACCATTTCAACCGTTGTTGGTGTCAGCTGTTCATACGGGAATGATGGAGGTGGCTTTTGCTAAAAGAGTCGTTTCAGAACCGGAACTGAGAAAGGCCCACGACTTGCATAAGGCTTCCTCTGTTGTAGGTGCTGCCTTTTTTATTGCAGATGACTTGTTCCCTAGAACACCATATCTTCATGCAGCATGGCACCTTGCTGCAGCTGTTGGAGTTGCAACTTGCAATAAGCTTCTTAAATAA___CAACCTTCAACTTATCATCTAAGCTTGCTTCAGAAGGCAATCAGAAACAAATATCTGTGTATTTCTCTTAATTTAGTTTTCTGTGAAAATAGGTGTATTCATTTTTTATCGCACGTTCCAAAAGTGGAAAGTGGTTTATTAGTACAATTATGTTTGGTCTCTGAAAAGTCAAAAATATTGACGAATTGTATCAATATTAGCCATGAAGTTTAGGTGCTGAAATTGAAGTACAGGCATTTTCATTTTTTAAAATTACTGAACTTTTTATGGAAGCAGTTGTCAAGGCAAGCCTGTTGACAGTTTTATTGGTGT

Fln Alignment:

Contig6098___MGAQRRSRQPRPLRGLHGVQLVHHTSFQQKLPSEGGFQLSNNVNSEAPVDDRRLSMQFEDNDNLKISGTTWPHHHLRRIWQMRPGCFRSVVQCSHLGDQSLAETTANVLTSIPFIFLGIQAPRRRLSDMLYANSLVGVGVASSLYHTSRGEVRKVFRWADYAMIATTAVCLSTAIRDDNPKLLMAASAVLLPFQPLLVSAVHTGMMEVAFAKRVVSEPELRKAHDLHKASSVVGAAFFIADDLFPRTPYXXXXXXXXXXXXXXTCNKLLK
D7KYF9______________MSPQSVSTTSKSLEGVHGVHVVSHSHF--------GFESIGQVSSYESADAGTKQRLF-----------------IERVWQQRPPCLRPI-HCSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIASSLYHSSRGKLRKYLRWADYTMIATATVCLTRALREENPKFLMAASALALPFQPLVVSAVHTGMMEVAFAKRALEDPDLKMAHDVHKMSSLLGGALFIADDLFPETPFIHAGWHLAAAIGVGTCNKLLQ

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
1204		90		10	0.90298
1259			14	85	0.993533
1286	85		14		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain