SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene6068

Length: 1623 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene6068

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ADP-sugar diphosphatase [Solanum tuberosum]	-	-	0.0	59%
FL-Next	sp=Nudix hydrolase 14, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	61%
Sma3	ADP-sugar diphosphatase	-	-	9.277e-10	-

Source	ECs	Term	Type	e value	Identity
Sma3	ADP-sugar diphosphatase.	EC:3.6.1.21	-	9.277e-10	-

Source	KEGGs	Term	e value	Identity
Sma3	Fructose and mannose metabolism	00051	9.277e-10	%
Sma3	Purine metabolism	00230	9.277e-10	%
Sma3	Starch and sucrose metabolism	00500	9.277e-10	%

Source	Gene names
Sma3	At4g11980; F16J13.50; GSVIVT00001049001; NUDT14; Os06g0129700; OsI_21479; OsJ_19988; P0538C01.23; PHYPADRAFT_132915; POPTRDRAFT_554275; RCOM_1682170; VITISV_016365; aspP;

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	hydrolase activity	GO:0016787	Molecular Function	-
Sma3	ADP-sugar diphosphatase activity	GO:0019144	Molecular Function	-
Sma3	manganese ion binding	GO:0030145	Molecular Function	-

Source	InterPros	Term	Type	e value	Identity
Sma3	NUDIX hydrolase domain	IPR000086	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G11980.1	ATNUDT14, ATNUDX14, NUDX14 nudix hydrolase homolog 14 chr4:7183845-7185551 REVERSE LENGTH=309	61%
RefSeq	Arabidopsis thaliana	NP_567384.1	nudix hydrolase 14 [Arabidopsis thaliana]	61%
RefSeq	Populus trichocarpa	XP_002303547.1	predicted protein [Populus trichocarpa]	65%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9SZ63

Fln msg: your sequence is longer than subject: 374 - 309

Fln protein: MLSSIPQHSGRKCGALVSFSSSLFLVKELRKKKLFNAANACPSVSCAYQSLSTTFYHGYCFRKSENQIFGTSSAFSVSECQPSQSFRAMAWQEPHSGVLRTDGTSVPALSLTIHNNTVEVAAAPGVTYSELRKAFDSILFKQWINNMKSETGILALDDRCCLKKVLIQSLDMFGERVGFLKFKAEVVDKATGSKLPGIVFARGGAVAILMVLECDGESYVVLTEQARVPVGRTILELPAGMLDDDRGDFVGTAAREVKEETGIHISSGDLVNLTAFLDPSTGNKMFPSPGGSDEEISLLLYKGHVKKEVVEALRGRETGLRSHGELIKLHIVPYKTLWRVTADSKALAAITLYEMAKKEGILPLQNTPELFSS*

Protein Length: 375

Fln nts: ATGGGCTGCTTCTACTAGACTTTAGACTTTATGGGTAATGGAAAATTCGTCGAACTGTTTATTCTATGCTTATTCAGGGGAGAAATTTGTATGTCAGTTATGCTGTGGTCGACCGGTACATTGAAGGGTAGTCCAGGATACTCACTCATCTTGGATGAGTGACACGTTATAAATTGAAA_-_ATGTTGAGCTCCATACCGCAACACTCGGGTAGGAAATGTGGTGCTCTAGTCTCGTTCTCCTCTTCGCTCTTTCTTGTGAAGGAACTCAGAAAGAAAAAGCTTTTCAATGCAGCAAATGCTTGCCCTTCTGTGAGTTGTGCATATCAGAGCTTATCCACCACATTTTATCACGGATATTGTTTCAGGAAGTCAGAAAACCAAATATTTGGTACTTCCTCAGCATTTTCTGTAAGTGAATGCCAGCCATCCCAGTCATTTAGAGCAATGGCCTGGCAAGAACCTCATTCTGGAGTCTTGAGGACTGATGGAACAAGTGTTCCAGCGCTATCTCTTACTATCCATAACAATACAGTAGAGGTGGCAGCAGCTCCTGGAGTAACATATTCTGAATTAAGGAAAGCATTTGATTCTATTCTGTTCAAGCAATGGATAAATAATATGAAAAGTGAGACAGGCATCCTGGCCCTTGATGATAGATGTTGTTTAAAGAAAGTACTGATTCAGAGTTTAGACATGTTTGGAGAGCGTGTTGGATTTTTAAAGTTCAAGGCCGAGGTAGTGGATAAAGCAACAGGATCAAAGCTTCCAGGCATTGTGTTTGCTCGAGGTGGGGCAGTTGCTATCTTGATGGTCTTGGAGTGCGATGGAGAGTCCTATGTAGTGTTAACAGAACAGGCTAGAGTCCCTGTTGGAAGAACTATTCTCGAACTGCCAGCTGGTATGCTGGATGATGATAGAGGAGACTTTGTTGGTACTGCTGCTCGTGAGGTCAAAGAAGAAACTGGCATACACATAAGTTCAGGAGATCTGGTTAACCTGACTGCTTTTCTGGATCCTTCAACAGGGAACAAGATGTTTCCTTCTCCGGGTGGAAGCGATGAAGAGATATCTCTCTTGTTGTATAAGGGTCATGTGAAAAAAGAGGTTGTGGAAGCTTTACGTGGTCGAGAAACAGGCCTTCGTAGTCACGGTGAATTGATTAAGCTGCATATAGTACCATATAAAACACTTTGGCGTGTAACTGCGGACTCCAAGGCCCTTGCTGCAATTACATTATATGAAATGGCCAAGAAAGAGGGTATTTTGCCTCTGCAGAATACACCCGAATTATTCAGTTCATAA___TCATGGGTTGGTCTAAATAATCCATTTGTAAATCTACCGCTCTAGTGTAATTTGTGATATCGTTTTCGTTAGCAAATTGTTGATCGAGTATATGGATCGTTACAATGACATATTTGATGGAGGTTAACGGTAAGGTTTAATAATAATTGATCTCTAACCATGCAATGCTGAAAATGCATTTGAAAAAGAAACATCATGATACTTCAGAAACAATAGTAGTTTTACCATTCATAATTTCTCATTGTTACTGCAATTTGCAAATTAACACCAATTCATCAAGACCCTATAAGTGCAGTGAGAAAGCAGATGATGGACACCAAAG

Fln Alignment:

Contig6068___NNTVEVAAAPGVTYSELRKAFDSILFKQWINNMKSETGILALDDRCCLKKVLIQSLDMFGERVGFLKFKAEVVDKATGSKLPGIVFARGGAVAILMVLECDGESYVVLTEQARVPVGRTILELPAGMLDDDRGDFVGTAAREVKEETGIHISSGDLVNLTAFLDPSTGNKMFPSPGGSDEEISLLLYKGHVKKEVVEALRGRETGLRSHGELIKLHIVPYKTLWRVTADSKALAAITLYEMAKKEGILPLQ
Q9SZ63______________NEPVLVSATAGISSSDFRDAIDSSLFRNWLRNLESESGILA-DGSMTLKQVLIQGVDMFGKRIGFLKFKADIFDKETGQKVPGIVFARGPAVAVLILLESDGETYAVLTEQVRVPTGKIVLELPAGMLDDDKGDFVGTAVREVEEEIGIKLKKEDMVDLTAFLDPSTGYRIFPSPGGCDEEMSVFLYRGQVEKETIRQLQGKETGLREHGEFIKVRLIPYRELWRKTADAKVLMSIGLYEMAQREGLVSSQ

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
838		16		83	0.994512
1150	64	35			1.0
1168	23		76		1.0
1364		83		16	0.999991
1392		30		70	1.0
1412		66		33	1.0
1431	33	66			1.0
1499	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain