SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene5059

Length: 829 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene5059

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cellulose synthase-like protein CslG [Nicotiana tabacum]	-	-	0.0	39%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	79%
Sma3	Chromosome chr2 scaffold_176, whole genome shotgun sequence	-	-	2.791e-13	-

Source	ECs	Term	Type	e value	Identity
Sma3	Cellulose synthase (UDP-forming).	EC:2.4.1.12	-	3.797e-14	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Starch and sucrose metabolism	00500		3.797e-14	%

Source	Gene names
Sma3	At4g23990; CSLE6; CSLG3; GSVIVT00006701001; GSVIVT00006710001; GSVIVT00006717001; GSVIVT00006719001; GSVIVT00006720001; GSVIVT00010942001; GSVIVT00010946001; GSVIVT00010947001; GSVIVT00010950001; GSVIVT00033394001; LOC_Os09g30130; Os09g0478200; P0556A05.3

Source	GOs	Term	Type	Identity
Sma3	Golgi membrane	GO:0000139	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	cellulose synthase (UDP-forming) activity	GO:0016760	Molecular Function	-
Sma3	transport	GO:0006810	Biological Process	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	cellulose biosynthetic process	GO:0030244	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3		IPR000348	-	-
Sma3	Cellulose synthase	IPR005150	-	-
Sma3	GOLD	IPR009038	-	-
Sma3	Extracellular solute-binding protein, family 3, conserved site	IPR018313	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LK55

Fln msg: your sequence is shorter than subject: 270 - 744

Fln protein: NAFLGSAPNNLIDTLIQHKRWAVGLLELVLSMFCPYVYGIGRTPIAQRMCYSFYSLWSLSSMYLLSYGLVPGLCMLRGLSLFPKASSSCFFIFSSLAISGYGYSLIEFIWIRGLFKSWWNDQRMWLIKGVSAYLFALIEVAGKMFGVSEVGFEVTSKVVDSEAAKRYEAEIFEFGVTSALFIPPATLALINLISLVSGLARILREGYSTFDSMVLQLLLCSYIVVSGYPILEAMFMRKDKGRIPTSVTIVSTLLAVSSCSVASTAIPSR*

Protein Length: 271

Fln nts: AACGCATTTTTAGGGTCTGCTCCAAATAACTTGATTGATACACTAATTCAACATAAGAGGTGGGCTGTCGGCTTACTTGAATTGGTCTTGAGTATGTTTTGCCCCTATGTGTATGGGATTGGGCGAACACCAATCGCCCAGCGAATGTGTTATAGTTTCTACTCCCTATGGTCTCTGTCTTCCATGTATCTACTAAGCTACGGTTTAGTTCCTGGTCTTTGCATGCTCCGTGGTCTATCATTATTTCCAAAGGCATCAAGTTCATGTTTCTTTATCTTTTCGTCCTTAGCAATATCCGGATATGGGTACAGTCTGATTGAGTTTATATGGATCCGGGGCTTGTTTAAAAGTTGGTGGAACGATCAGAGAATGTGGTTGATTAAAGGCGTGTCAGCCTATCTCTTTGCTTTAATCGAAGTCGCTGGCAAGATGTTTGGTGTATCAGAAGTAGGCTTCGAGGTGACGAGCAAAGTAGTGGATAGCGAAGCAGCCAAAAGATACGAGGCCGAAATATTCGAGTTTGGCGTGACATCTGCTTTGTTTATTCCACCAGCAACTTTGGCCCTTATAAACTTGATATCTTTGGTCAGTGGACTAGCACGAATCCTGCGAGAAGGGTATTCGACTTTTGATAGTATGGTTTTGCAGCTACTTTTGTGCAGCTATATAGTCGTCAGTGGTTATCCTATATTGGAGGCCATGTTTATGAGGAAAGACAAAGGGCGAATACCTACTTCTGTTACCATCGTCTCTACTTTACTTGCAGTTAGCTCTTGCTCTGTCGCTTCTACAGCTATTCCATCCCGTTAG___AACTCTTGCTCTGTCGCTT

Fln Alignment:

Contig5059___AFLGSAPNNLIDTLIQHKRWAVGLLELVLSMFCPYVYGIGRTPIAQRMCXXXXXXXXXXXXXXXXXGLVPGLCMLRGLSLFPKASSSCFFIFSSLAISGYGYSLIEFIWIRGLFKSWWNDQRMWLIKGVSAYLFALIEVAGKMFGVSEVGFEVTSKVVDSEAAKRYEAEIFEFGVTSALFIPPATLALINLISLVSGLARILREGYSTFDSMVLQLLLCSYIVVSGYPILEAMFMRKDKGRIPTSVTIVSTLLAVSSCSVASTAIPSR
B8LK55______________AFLGCAPNNLNDTLIQHKRWAAGHLELFLSKFCPYLHGIQRIRVAQRMCYSFCGLWSLSSMHILCYGLIPGLCMLRGLSLFPKVSSSYFFLFASLAVSGYGYSLIEFIWNGGWFKSWWNEQRMWMIKGVSAYLFASIEVVGKMLGVSEVGFEVTSKVVDSEAAKRYEGEIFEFGVASALFIPLTTLAIINLISLVGGLARILLEGYSAFECMILQLLLCSFIVINGCPIFEAMFIRKDKGRIPTSITIFSILVAVSVCSVAYMAIPSR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain