SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene4714

Length: 766 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene4714

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana] gb\|AAR24666.1\| At1g12740 [Arabidopsis thaliana] dbj\|BAD44087.1\| hypothetical protein [Arabidopsis thaliana] gb\|AEE28919.1\| cytochrome P450, family 87, subfamily A, polypeptide 2	-	-	0.0	68%
FL-Next	tr=Cytochrome P450 90A20; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	42%
Sma3	Cytochrome P450	-	-	1.777e-24	-

Source	ECs	Term	Type	e value	Identity
Sma3		EC:1.14.-.-	-	6.702e-10	-
Sma3	Taxane 10-beta-hydroxylase.	EC:1.14.13.76	-	4.262e-24	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Diterpenoid biosynthesis	00904		4.262e-24	%

Source	Gene names
Sma3	AP22.10; AT5G05690; AT5G48000; At1g12740; At1g78490; At1g78490/T30F21.17; At3g13730; At3g50660; At4g36380; At5g05690; At5g48000; C7A10.980; CPD; CYP708A2; CYP720B1; CYP87A1; CYP87A3; CYP87A7; CYP87A8; CYP87D10; CYP87D11; CYP87D12; CYP87D2v1; CYP87D4; CYP8

Source	GOs	Term	Type	Identity
Sma3	endoplasmic reticulum	GO:0005783	Cellular Component	-
Sma3	endoplasmic reticulum membrane	GO:0005789	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	cytoplasmic vesicle membrane	GO:0030659	Cellular Component	-
Sma3	monooxygenase activity	GO:0004497	Molecular Function	-
Sma3	iron ion binding	GO:0005506	Molecular Function	-
Sma3	electron carrier activity	GO:0009055	Molecular Function	-
Sma3	steroid 22-alpha hydroxylase activity	GO:0010012	Molecular Function	-
Sma3	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	GO:0016709	Molecular Function	-
Sma3	heme binding	GO:0020037	Molecular Function	-
Sma3	response to brassinosteroid stimulus	GO:0009741	Biological Process	-
Sma3	unidimensional cell growth	GO:0009826	Biological Process	-
Sma3	positive regulation of flower development	GO:0009911	Biological Process	-
Sma3	leaf morphogenesis	GO:0009965	Biological Process	-
Sma3	response to UV-B	GO:0010224	Biological Process	-
Sma3	brassinosteroid homeostasis	GO:0010268	Biological Process	-
Sma3	leaf shaping	GO:0010358	Biological Process	-
Sma3	brassinosteroid biosynthetic process	GO:0016132	Biological Process	-
Sma3	monopolar cell growth	GO:0042814	Biological Process	-
Sma3	leaf development	GO:0048366	Biological Process	-
Sma3	petal development	GO:0048441	Biological Process	-
Sma3	stamen development	GO:0048443	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Nucleoside diphosphate kinase	IPR001564	-	-
Sma3	Thiolase	IPR002155	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Transposon, En/Spm-like	IPR004242	-	-
Sma3	F-box associated domain, type 3	IPR013187	-	-
Sma3	F-box associated interaction domain	IPR017451	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-
Sma3	Protein of unknown function DUF2052, coiled-coil	IPR018613	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G12740.2	-	68%
RefSeq	Arabidopsis thaliana	NP_172734.2	cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana]	68%
RefSeq	Populus trichocarpa	XP_002299557.1	cytochrome P450 [Populus trichocarpa]	68%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
197	33		66		0.997452
695	33	66			0.997452
696	66	33			0.997452
700	66	33			0.997452
745	66			33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain