SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene4427

Length: 1253 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene4427

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cytokinin-O-glucosyltransferase 3 n=2 Tax=Andropogoneae RepID=B4FPY0_MAIZE	-	-	1.0e-35	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	54%
Sma3	Putative Hydroquinone glucosyltransferase	-	-	1.521e-11	-

Source	Gene names
Sma3	AT4g34130; A_IG002N01.15; At4g01070; At4g34120; At4g34120/F28A23.120; At4g34131; At4g34135; Eg7GT-A; F2N1.15; GSVIVT00014670001; GSVIVT00033569001; GT5; OSIGBa0137D06.2; OSJNBa0082C09.34; OSJNBb0012E24.12; Os02g0242100; Os02g0242900; Os02g0243300; Os04g05

Source	GOs	Term	Type	Identity
Sma3	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	-
Sma3	anthocyanidin 3-O-glucosyltransferase activity	GO:0047213	Molecular Function	-
Sma3	flavonol 3-O-glucosyltransferase activity	GO:0047893	Molecular Function	-
Sma3	hydroquinone glucosyltransferase activity	GO:0050505	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	response to toxin	GO:0009636	Biological Process	-
Sma3	response to salt stress	GO:0009651	Biological Process	-
Sma3	xenobiotic catabolic process	GO:0042178	Biological Process	-
Sma3	flavonol biosynthetic process	GO:0051555	Biological Process	-
Sma3	response to other organism	GO:0051707	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Source	Species	ID	Description	e value	Identity
RefSeq	Populus trichocarpa	XP_002333409.1	predicted protein, partial [Populus trichocarpa]	1.0e-35	60%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LQW6

Fln msg: Separated hits, possible frame ERROR between 227 and 254, your sequence is shorter than subject: 250 - 504

Fln protein: RWPVLPYDYITGSSATTPLDRGEASISEWLNQQAPGSVVYVSFGSRNFLSAAQIRELAFGLQGSGKPFIWVLRTxxxxxxxxxxSSQSLLPEGFERDTSGQGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNAKWFVEQLRVAVRAQREDGDVVPREEVERVVRVVLEDEGDLDVRGRVRNLAHVAQAAVIDGGSSAKNWDSFVKHISFLQSSSNESTRIHSSSQES*

Protein Length: 251

Fln nts: ACCGTTGGCCCGTTTTACCCTACGATTACATCACGGGATCCTCTGCTACAACCCCTCTGGATCGAGGGGAAGCATCGATCTCGGAATGGCTGAACCAGCAAGCGCCGGGTTCTGTCGTTTATGTTTCGTTCGGGAGCAGGAATTTTCTGTCCGCTGCCCAGATTCGAGAACTCGCATTTGGGCTCCAAGGTAGCGGGAAACCCTTCATATGGGTTCTGCGTACTCCxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCCTCGCAGTCTCTGCTCCCGGAAGGATTCGAACGCGATACCTCCGGGCAAGGCCTGGTGATCACAGGATGGGCACCGCAGCTTCTCATCCTGTCTCATCCTTCCACGGGCGCTTTCATCAGCCACTGCGGCTGGAATTCCATGTTGGAAAGCGTGAGCAGAGGGATTCCCATCATCTGTTGGCCCATGGCGGGTGAGCAGTTCCTTAATGCCAAGTGGTTCGTCGAACAGCTCCGAGTTGCCGTGCGAGCACAGCGGGAAGACGGTGATGTCGTGCCAAGAGAAGAGGTGGAGAGGGTTGTGAGGGTCGTCCTGGAGGACGAAGGGGATCTGGATGTGAGAGGCAGAGTCCGAAATCTGGCTCATGTCGCCCAGGCAGCGGTGATTGATGGCGGTTCGTCTGCTAAAAACTGGGATTCCTTTGTGAAGCACATCTCTTTCCTCCAGAGTTCATCAAATGAATCCACTCGCATACATTCATCTTCACAAGAATCATGATGGATGGTAAACATTATTGACCAGGTAGAAACGTCATCTAAGGCCTGCAGGGACCGCACATACTCATCTTCATCATGCTCTCCTGGAAGTTAGAATGGATGCAGACCTTATTGACCAGGCAAACGTCATCATTGGCGGGCAGGAACTGTTTAGTGCAGAACATTAATGAAAAGGTGGAGCCATACAATTGCATGAACTCCAGAGCAGGGGTGGAATTGCAGAGAACCATAATGGAGAGACTGAATTATAGAAAATTGCCTACTTGGAGGTTATAGAAGGGTCCTACTTGGCCACCCAACCACAAATTCGAATTTCAAATTCCAACTCATGAAGATTTGTGGAATAATTGTAGAAGATGTGGATCATTAACTATGCACATTCAAAGGAGAAGAATCATGGATGAGAGGATTTGTATCTTACATTTTTAGGAGATTGGTTGTAACCACAAAAGGCCAATGTGGATTTAGGAGAGATCTAAAGATACATATTTATTGTATAATTA

Fln Alignment:

Contig4427___LDRGEASISEWLNQQAPGSVVYVSFGSRNFLSAAQIRELAFGLQGSGKPFIWVLRTPxxxxxxxxxSSQSLLPEGFERDT--SGQGLVITGWAPQLLILSHPSTGAFISHCGWNSMLESVSRGIPIICWPMAGEQFLNAKWFVEQLRVAVRA--QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVRNLAHVAQAAVIDGGSSAKNWDSFVKHISFL
B8LQW6______________LNTEEDKCLDWLDAQAEASVLYISFGSENSIASAQIEELAIGLEASGAKFVWVLRTPxxxxxxxxxSALDFLPEGFHSRTVEKKQGIIILGWAPQLSILAHPATGGFMSHCGWNAVLETTTMGVPMIAWPLYAEQHFNSKFVVDEIQIALEAPQRIDQNFLVTRDGVERIVKVLMVEEKGRELRERVRELKALARAAVAEGGSSTKNLDLFVSEIMSL

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
840	11		88		0.923564
856	88		11		0.923564
858		88		11	0.923564
894	22		77		0.999999
903	88		11		0.923564
912		88		11	0.923564
925			88	11	0.923564
927	11		88		0.923564
928			88	11	0.923564
936	11	88			0.923564
940		11		88	0.923564
971	85	14			0.993533
972		14	85		0.993533
990	75			25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain