SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3625

Length: 1479 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene3625

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipase, putative [Oryza sativa Japonica Group] gb\|ABA91873.1\| Lipase family protein, expressed [Oryza sativa Japonica Group]	-	-	1.0e-38	33%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	77%
Sma3	Putative uncharacterized protein	-	-	3.151e-07	-

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NW04

Fln msg: Separated hits, possible frame ERROR between 745 and 750, your sequence is shorter than subject: 398 - 616

Fln protein: TLLKNVLQYTATVAYHGVDSKGSDGVIKRSPYKPFGTYMFCSNHGAACIENCETILMMLYLTMKSHEKSYDNIVQDCFSAHIGYGSVLKQVIDNSISGKRFANSDSGSSYKIGILVQSEAIGFESQNDHAQLALQKAGETETKYNTNVDRLAIELSLKQRTMAELEWYKERCEKEGGVGYYDTFKNQDMKDIHADGHRMKLAVFWDEIIEKWEGHELPSDFESQNKWINAGNAYRRLVEPLDIAHYYxxxPLDIAHYYGMSEGKGSYLSDGRPNRYKVLQEWMEAKEKTRSSRGQRRRTKRASLTPDSCFWAHVEEGWKDLENLKQGQHQSLQNLEKFEEYVTKMENDLNISRDVFWEGSSFKMW*EEWKEYKKNQSPDWSSALYQIMEKLEKLQVI*

Protein Length: 399

Fln nts: GACTCTTCTTAAAAATGTCCTGCAGTATACTGCTACAGTGGCATACCATGGAGTTGACTCAAAGGGATCAGATGGGGTTATAAAGAGAAGCCCATACAAACCTTTTGGTACTTACATGTTTTGCTCAAACCATGGCGCAGCTTGCATTGAGAATTGTGAGACCATTTTGATGATGCTTTATTTGACAATGAAGAGCCATGAAAAGTCATATGATAATATTGTACAGGATTGTTTTTCAGCGCATATAGGATATGGTTCTGTTTTGAAACAGGTCATAGACAACTCCATAAGTGGTAAAAGATTTGCCAATTCTGATTCCGGATCCTCTTACAAGATAGGAATCTTGGTGCAATCAGAAGCTATCGGTTTTGAATCTCAGAATGATCATGCACAGCTTGCCCTACAGAAAGCTGGAGAAACTGAAACCAAGTATAACACAAATGTTGATAGGCTAGCTATTGAGTTAAGCCTAAAACAAAGAACTATGGCAGAGCTTGAATGGTATAAAGAGAGATGTGAGAAGGAGGGTGGCGTCGGATATTATGATACCTTTAAGAACCAAGACATGAAGGATATTCATGCTGATGGGCATAGGATGAAGCTTGCTGTGTTTTGGGATGAGATTATTGAAAAATGGGAAGGTCATGAGTTGCCAAGTGATTTCGAGTCCCAAAATAAGTGGATAAATGCTGGCAATGCGTATAGGAGACTTGTAGAGCCTCTGGATATTGCACATTATTATCGxxxxxxTCCTCTGGATATTGCACATTATTATGGCATGTCTGAGGGTAAAGGCAGCTATCTTTCAGATGGAAGACCCAATCGCTATAAGGTTCTTCAGGAATGGATGGAAGCGAAAGAAAAAACTCGCAGTTCAAGAGGTCAACGGCGCCGCACAAAGCGTGCATCCCTTACTCCGGACTCGTGCTTCTGGGCACATGTAGAAGAGGGCTGGAAAGACCTGGAAAATCTGAAACAAGGCCAACACCAAAGCTTACAAAATCTTGAAAAGTTCGAAGAGTATGTAACAAAGATGGAAAACGATCTCAACATTTCTCGAGATGTTTTCTGGGAAGGAAGCAGCTTCAAGATGTGGTAGGAAGAATGGAAAGAGTATAAGAAAAATCAATCCCCTGATTGGAGCTCTGCTTTATATCAGATAATGGAAAAGTTGGAAAAGTTGCAGGTTATTTGAATGAAAAAGCTGTTTAGAAGATGATCTTCCCCTGGATGAAGCTCTGCTTTATGTCAGATAATGGGATGCTTTCTTGAAAGTTTCAGGTTTCTTGCTGTTTCCATCTCTACCTTCCAGTTTAGTTGCTTGTATTGTTTTCGAGATTCAAGAAAGAGGCTATTCTTCTAATTAGATTGTCTGTTTGGCTTCAGATATGCAAGGTCAGTTTCTACCTTCAAGCGAAAATACCTTTTCCAATTAGGTTGAGAAGAGGAGCTTCTTATTATTATTATTTTTAAATGACAGG

Fln Alignment:

Contig3625___TLLKNVLQYTATVAYHGVDSKGSDGVIKRSPYKPFGTYMFCSNHGAACIENCETILMMLYLTMKSHEKSYDNIVQDCFSAHIGYGSVLKQVIDNSISGKRFANSDSGSSYKIGILVQSEAIGFESQNDHAQLALQKAGETETKYNTNVDRLAIELSLKQRTMAELEWYKERCEKEGGVGYYDTFKNQ-DMKDIHADGHRMKLAVFWDEIIEKWEGHELPSDFESQNKWINAGNAYRRLVEPLDIAHYYRxxPLDIAHYYGMSEGKGSYLSDGRPNRYKVLQEWMEAKEXXXXXXXXXXXXXXASLTPDSCFWAHVEEGWKDLENLKQGQHQSLQNLEKFEEYVTKMENDLNISRDVFWEGSSFKMXXXXXXXXXXNQSPDWSSALYQIMEKLE
A9NW04______________TLLENVLQYTYTVAYYGVDSRGSDGVIKRSPYKPLGTYMFCSSHGAACIDNSETILKLLHFTMQSHEKLSDNIVQDWFSEHIGYGAVLKHVIENSISGKRFANPDSKSSYEMGISLQLEAIGVGAQNDHAQFALRRAGETEDNYNTNVDKLAIELSLKQSSMAELEWYKERCEKEDGITYYDSFKKQNNRKDFRANVDRKKLCQFWDEIIEKWEGHELPSDFESQNKWINAGNTYRRLVEPLDIASYYRxxPLDIASYY-RTNGNGNYLSDGRPNRHKILQRWMEAKEKTRSSRGQRPRTKRASLTADSCFWAHVEEAWKDLENLKQGQHQSLQKLEKFEEDVTNMENALTISPDVFLEGSSFIMWWEEWKEYKKNQSPEWSSPLYKIMEKLQ

SSRs (tot: 1)

Start position	End position	Sequence	Length
1453	1466	TTA TTA TTA TTA TT	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain