SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3596

Length: 1153 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene3596

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Phenylcoumaran benzylic ether reductase homolog TH6 n=4 Tax=Pinaceae RepID=Q9M523_TSUHE	-	-	0.0	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Sma3	Leucoanthocyanidin reductase	-	-	1.223e-25	-

Source	ECs	Term	Type	e value	Identity
Sma3	Leucoanthocyanidin reductase.	EC:1.17.1.3	-	1.067e-30	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Flavonoid biosynthesis	00941		1.067e-30	%
Sma3	Biosynthesis of phenylpropanoids	01061		1.067e-30	%
Sma3	Biosynthesis of secondary metabolites	01110		1.067e-30	%
Sma3	Oxidoreductases, Acting on the CH-CH group of donors, With NAD(+) or NADP(+) as acceptor.	EC:1.3.1.-	-	1.013e-13	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Fatty acid biosynthesis	00061		1.013e-13	%
Sma3	Phenylalanine metabolism	00360		1.013e-13	%
Sma3	Chlorocyclohexane and chlorobenzene degradation	00361		1.013e-13	%
Sma3	Fluorobenzoate degradation	00364		1.013e-13	%
Sma3	Tryptophan metabolism	00380		1.013e-13	%
Sma3	Xylene degradation	00622		1.013e-13	%
Sma3	Toluene degradation	00623		1.013e-13	%
Sma3	Polycyclic aromatic hydrocarbon degradation	00624		1.013e-13	%
Sma3	Propanoate metabolism	00640		1.013e-13	%
Sma3	Isoflavonoid biosynthesis	00943		1.013e-13	%
Sma3	Biosynthesis of unsaturated fatty acids	01040		1.013e-13	%
Sma3	Metabolic pathways	01100		1.013e-13	%
Sma3	2'-hydroxyisoflavone reductase.	EC:1.3.1.45	-	1.618e-32	-

Source	KEGGs	Term	e value	Identity
Sma3	Isoflavonoid biosynthesis	00943	1.618e-32	%
Sma3	Biosynthesis of phenylpropanoids	01061	1.618e-32	%
Sma3	Biosynthesis of secondary metabolites	01110	1.618e-32	%

Source	Gene names
Sma3	A622; A622L; AIS1; AT4g13660; AT4g34540; AT4g39230; At1g32100; At1g75280; At1g75290; At1g75300; At1g75300/F22H5_16; At4g13660; At4g34540; At4g39230; BETV6; BETV6.0102; DDCBER1; EGS1; F18A5.50; F22H5.16; F22H5.17; F22H5.18; F3C3.10; GSVIVT00011864001; GSVI

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	catalytic activity	GO:0003824	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	pinoresinol reductase activity	GO:0010283	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	transcription repressor activity	GO:0016564	Molecular Function	-
Sma3	leucoanthocyanidin reductase activity	GO:0033788	Molecular Function	-
Sma3	2'-hydroxyisoflavone reductase activity	GO:0047526	Molecular Function	-
Sma3	regulation of nitrogen utilization	GO:0006808	Biological Process	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	phenylpropanoid metabolic process	GO:0009698	Biological Process	-
Sma3	lignan biosynthetic process	GO:0009807	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-
Sma3	oxidation-reduction process	GO:0055114	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Cecropin	IPR000875	-	-
Sma3	NmrA-like	IPR008030	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-
Sma3	Cyclic nucleotide-binding, conserved site	IPR018488	-	-
Sma3	Peptidase S26A, signal peptidase I, conserved site	IPR019758	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G39230.1	NmrA-like negative transcriptional regulator family protein chr4:18266024-18267604 REVERSE LENGTH=308	61%
RefSeq	Arabidopsis thaliana	NP_195634.1	NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]	61%
RefSeq	Populus trichocarpa	XP_002313786.1	phenylcoumaran benzylic ether reductase 2, partial [Populus trichocarpa]	64%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKV7

Fln msg: Separated hits, possible frame ERROR between 215 and 229, W2: There is no M at the beginning,

Fln protein: HCLSSGINAEYAGGGTGYIGSYISRASLALGHPTFLLVRESTTSNPEKARLLESFKESGANILRGSLEDLxxxxxxVQGSLEDQASLVEAIKKVDVVISAAKGPQMMDQLNIIKAIKEVGTIKRFLPSEFGNDVDKVHAVEPVKTMYENKAKIRRAIEAEGIPYTYVSNNCFARYFLPGFGHLDITAPPRDKVVIFGDGNAKAVFVKEEDIGTFTIKAVDDPRTLNKTLYFRLPANIYSLNELVALWEKKIGKTVEKLYLPEEEILKKITETPFPDNIGMAIEHSIFVKGDQTNFEIGPDGVEASQLYPDVKYTAVEEFLNQYV*

Protein Length: 326

Fln nts: ACCACTGCTTAAGCAGTGGTATCAACGCAGAGTACGCGGGGGGGGGAACAGGCTACATTGGTAGTTATATATCCAGAGCCAGCCTTGCTCTCGGCCATCCCACATTCCTTCTTGTTAGAGAGTCTACTACTTCTAATCCTGAAAAGGCTCGGCTTCTGGAATCGTTTAAGGAATCGGGAGCTAATATACTACGTGGATCTCTAGAGGACCTGATxxxxxxxxxxxxxxxTGTGCAGGGATCTCTAGAGGACCAGGCAAGTCTTGTGGAAGCAATCAAGAAAGTCGATGTAGTTATTTCAGCAGCAAAGGGACCACAGATGATGGATCAGCTGAACATTATCAAGGCCATTAAGGAGGTTGGAACCATCAAGAGGTTTTTGCCATCTGAGTTTGGAAATGACGTTGATAAAGTCCATGCAGTGGAGCCCGTAAAGACCATGTATGAAAACAAAGCAAAAATTCGTAGGGCAATTGAGGCAGAAGGCATCCCTTACACATATGTCTCAAACAATTGCTTTGCTAGGTACTTTTTGCCAGGTTTTGGGCATCTGGACATTACTGCCCCCCCAAGAGATAAAGTTGTAATATTCGGAGATGGAAATGCCAAAGCTGTTTTTGTAAAGGAGGAAGATATTGGAACATTCACAATCAAGGCGGTGGATGACCCCAGAACTCTGAACAAGACCCTATATTTTAGGCTTCCTGCCAACATTTATTCTCTCAACGAACTTGTAGCTCTATGGGAGAAAAAGATTGGCAAGACTGTGGAGAAGTTGTATCTACCAGAGGAAGAGATCCTGAAAAAGATTACAGAAACACCATTCCCAGATAACATTGGCATGGCAATTGAGCACTCTATTTTTGTAAAAGGGGATCAAACAAATTTTGAAATTGGACCTGATGGTGTAGAGGCCAGTCAGCTCTACCCAGATGTGAAATACACTGCTGTTGAAGAATTCCTCAATCAGTATGTCTAAAGCAGATTGTAGGAGGTGCTTGGAAGAACATCAGAGGGGCTGGATGCCTTTATCCATTTTGGATGAAACTTTTGGGAGTTACCAAAATAATAATTCTCAGGTCACTGATTCCTTCTGTTTTGCAGTTTCGTGTTTTGTGGATAGCCACTATTCAATCAAGCTGGGATTTTGGATAAGT

Fln Alignment:

Contig3596___RASLALGHPTFLLVRESTTSNPEKARLLESFKESGANILRGSLEDLIxxxxxVQGSLEDQASLVEAIKKVDVVISAAKGPQMMDQLNIIKAIKEVGTIKRFLPSEFGNDVDKVHAVEPVKTMYENKAKIRRAIEAEGIPYTYVSNNCFARYFLPGFGHLDITAPPRDKVVIFGDGNAKAVFVKEEDIGTFTIKAVDDPRTLNKTLYFRLPANIYSLNELVALWEKKIGKTVEKLYLPEEEILKKITETPFPDNIGMAIEHSIFVKGDQTNFEIGPDGVEASQLYPDVKYTAVEEFLNQYV
B8LKV7______________KASLALGHPTFLLVRESTASNPEKARLLESFKASGANILRGSLEDQVxxxxxLRGSLEDQVSLVEAIKKVDVVISAAKGPQMMDQLNIIKAIKEVGTIKRFLPSEFGNDVDKVHAVEPAKTMYENKAKIRRAIEAEGIPYTYVSNDCFARYFLPGFGHLDITAPPRDKVVIFGDGNAKAVFVEEEDIGTFTVKAADDPRTLNKTLYFRLPANTYSINQLVALWEKKIGKILEKFYIPEEEFLKKIAETPFPDNVGMAIEHSIFVKGDQTNFEIGPDGVEASQLYPDVKYTTVEEFLSQYI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain