SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3512

Length: 1788 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene3512

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	mitogen-activated protein kinase [Gossypium hirsutum] gb\|ADI52624.1\| mitogen-activated protein kinase [Gossypium hirsutum]	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Sma3	Putative uncharacterized protein	-	-	-

Source	GOs	Term	Type	Identity
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	MAP kinase activity	GO:0004707	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	MAP kinase, conserved site	IPR003527	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G10210.1	ATMPK1, MPK1 mitogen-activated protein kinase 1 chr1:3349579-3350776 FORWARD LENGTH=370	68%
RefSeq	Arabidopsis thaliana	NP_001031017.1	mitogen-activated protein kinase 1 [Arabidopsis thaliana]	68%
RefSeq	Populus trichocarpa	XP_002302017.1	predicted protein [Populus trichocarpa]	70%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P1S7

Fln msg:

Fln protein: MATRVNPPNGVFVEGKHYYSMWRNTFELDAKYIPIKPIGKGAYGIVCSARNAETNEKIAIKKIINAFENQTDARRTLREIKLLRLFAHDNIIALKDIMTPVTRTNFNDVYLVYELMDTDLHQIIKSSQVLTDDHCKYFIYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTNCEKGQFMTEYVVTRWYRAPELLLSCEEYSTSIDIWSVGCIFAELLGRKPIFPGKDYINQLKLIVNVLGSPDEDDLEFIESQKARSYIKSLPVTSHASLQRLYPRANPSAISLLDKMLAFDPRKRITVTEALEHPYFSGLHDPSLELSATAPFDLDMPEEELKEEDLKEMFWNEMLHYHPEAANTS*

Protein Length: 370

Fln nts: TGCATTCTGCCTAACCATCTTCCCCGAAACCGTTGCATCCCTGCCTCTTCATTTCATGTCTCCTTCCATGCACATCTTAACTAACACAGACACATTGGATATACTGATCTTTTCCGTAGTACCCACTTCTCTGCCCTGCTGCTGCTGCTACTGCAGCATCCTCCCGTGCACAGCCCTTATACTCGACACACACACATCGAGTAACCAGAAACCTCGGCTCCCGTTTTAGGCATATGCACGTCGAGTATCGATCCATCTGCTCGGTCTGCAATTTGAAATTTTTGATTATTTGTTTCTGATTCGGAAGG_-_ATGGCCACCAGGGTGAATCCGCCTAACGGAGTTTTTGTGGAGGGGAAACACTACTATTCGATGTGGCGCAACACATTCGAGTTAGACGCCAAGTATATTCCCATCAAACCTATTGGGAAGGGCGCCTATGGAATTGTTTGCTCGGCCAGAAACGCAGAGACCAACGAGAAAATTGCCATTAAGAAGATCATCAATGCATTCGAGAACCAGACCGATGCGAGGAGGACGCTCAGGGAAATCAAGCTTCTCAGGCTGTTCGCCCATGATAATATAATTGCCTTGAAGGATATCATGACCCCTGTTACCAGGACTAATTTCAATGATGTTTATCTGGTCTATGAACTTATGGACACTGACCTACACCAGATCATCAAGTCTTCTCAGGTCCTCACTGATGATCATTGCAAGTACTTCATCTATCAGTTGCTGCGAGGACTAAAGTATCTGCATTCTGCCAATGTGTTGCATAGAGATTTGAAGCCAAGTAATCTATTATTGAATGCCAATTGTGACCTTAAGATATGTGATTTTGGCTTAGCTCGAACAAACTGTGAGAAAGGACAGTTCATGACTGAATATGTTGTCACACGATGGTACAGGGCTCCTGAATTGCTTCTGTCCTGTGAGGAATATAGTACATCTATCGATATTTGGTCTGTAGGCTGTATATTTGCAGAGTTATTGGGACGAAAGCCCATATTCCCTGGTAAGGATTATATCAACCAACTTAAACTGATTGTCAATGTACTTGGCAGCCCAGATGAAGATGATCTAGAATTTATCGAGAGCCAGAAGGCCCGCTCCTACATAAAATCACTTCCTGTTACTTCCCATGCTTCTCTACAACGTTTATATCCTCGAGCAAATCCTTCTGCCATCAGCCTACTAGACAAGATGCTAGCTTTTGATCCTCGCAAAAGAATCACTGTTACAGAGGCTCTTGAGCACCCTTACTTTTCTGGACTTCATGATCCAAGCCTAGAGCTTTCTGCAACAGCACCCTTTGATTTGGACATGCCTGAGGAAGAACTGAAAGAAGAAGATTTGAAGGAGATGTTCTGGAACGAAATGCTACATTATCATCCAGAAGCTGCAAATACATCATAG___ATAGGTGTAAAAATGTCCATTGTCTTGTGTTGGATGACTTCATGGAGGCGAAGATGAGACAGAAAGATGGCCTGGCTGATGGGACAGAAAGATGGCCTGGCTTTGAATTATATCTTGAAGTGGGGCGAGAAGTTTTGTTCAATATTGTACATGTATACAATTTCAATTTGTGTTCTCTCTGGAAATTTTCTGAGAACTGCGGACTTTTATTTTCAATGCTCTGAAAGTATGAAGAGAGAGTGAGTCTTTTATAACAGGTTATTTCATTGTAAGAAAGCACACTTGTTTATGTGTAATTTATTCATCATATTCCCATTGTAAATAAGATGTACTGCTAGTTGTCTAAATCAATAATATACTCTTTGATACGACT

Fln Alignment:

Contig3512___MATRVNPPNGVFVEGKHYYSMWRNTFELDAKYIPIKPIGKGAYGIVCSARNXXXXXXXXXXXXXXXXXXQTDARRTLREIKLLRLFAHDNIIALKDIMTPVTRTNFNDVYLVYELMDTDLHQIIKSSQVLTDDHCKYFIYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTNCEKGQFMTEYVVTRWYRAPELLLSCEEYSTSIDIWSVGCIFAELLGRKPIFPGKDYINQLKLIVNVLGSPDEDDLEFIESQKARSYIKSLPVTSHASLQRLYPRANPSAISLLDKMLAFDPRKRITVTEALEHPYFSGLHDPSLELSATAPFXXXXXXXXXXXXXXXXXFWNEMLHYHPEAANT
A9P1S7______________MATRVNPPCGVFAEGKHYYSMWRNTFEIDTKYIPIKPIGKGAYGIVCSAKNAETNEKVAIKKIINAFENQTDARRTLREIKLLRLFAHDNIIALKDIMTPACRTNFNDVYLVYDLMDTDLHQIIKSAQVLTDDHCKYFIYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTNCEKGQFMTEYVVTRWYRAPELLLSCEEYGTSIDIWSVGCIFAELLGRKPIFPGKDYINQLKLIVNVLGSPDEDDLDFIESQKARSYIKSLPVTSHASLQRLYPRANPFAISLLDKMLSFDPRKRITVTEALEHPYFSALHDPSLEPSATAPFDLDMPDEELKEEELRDMFINEVLYYHPEAANT

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
1324			10	90	0.90298
1325			10	90	0.90298
1388			30	70	1.0
1404	54	45			1.0
1463	16	83			0.999991
1699			90	10	0.90298
1752			42	57	1.0
1791		75		25	0.996473
1793	33	33			0.997753

SSRs (tot: 1)

Start position	End position	Sequence	Length
136	149	CTG CTG CTG CTG CT	14

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain