SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3458

Length: 1378 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene3458

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	peptide alpha-N-acetyltransferase [Arabidopsis thaliana] ref\|NP_973629.1\| peptide alpha-N-acetyltransferase [Arabidopsis thaliana] gb\|AAC27162.1\| putative acetyltransferase [Arabidopsis thaliana] gb\|AAR24208.1\| At2g38130 [Arabidopsis thaliana] gb\|AAT06434	-	-	0.0	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	94%

Source	Gene names
Sma3	At2g38130; CHLREDRAFT_117568; GSVIVT00037957001; LOC_Os11g32280; MICPUCDRAFT_7626; MICPUN_76569; OSTLU_8262; Os11g0525800; OsI_36311; OsJ_34081; Ot14g03160; PHYPADRAFT_119104; PHYPADRAFT_7348; POPTRDRAFT_176580; POPTRDRAFT_642436; POPTRDRAFT_675337; POPTR

Source	GOs	Term	Type	Identity
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	N-acetyltransferase activity	GO:0008080	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	GNAT domain	IPR000182	-	0.0	-
Sma3	Acyl-CoA N-acyltransferase	IPR016181	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G38130.1	ATMAK3 Acyl-CoA N-acyltransferases (NAT) superfamily protein chr2:15978639-15980145 REVERSE LENGTH=190	80%
RefSeq	Arabidopsis thaliana	NP_973629.1	peptide alpha-N-acetyltransferase [Arabidopsis thaliana]	80%
RefSeq	Populus trichocarpa	XP_002317002.1	predicted protein [Populus trichocarpa]	79%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5A859

Fln msg:

Fln protein: MAKEGTLASSSHLQEVTAAEDTNTNSGVVTAESIRYACYEGEHQLPLIMSIIDQELSEPYSIFTYRYFTKNWPRLCFLAFHEDNCVGTIVCKMGQHRNTFRGYIAMLVVIKPYRGKGIATELVTRAIRVMQESGCEEVALEAEVTNKGALALYGNLGFIRVKRLFRYYLNGVDAFRLKLLFPRPDLDSLLMLSEENYNMELSHPIYEGSGYHWDQQTNC*

Protein Length: 221

Fln nts: TGCTTAAGCAGTGGTATCAACGCAGAACAAGCACAGGGACACTATGTATATATGTGTTATTATTTTGCCTGACTATCTCATGCTTAGTAGGACTCTTGGTAAATTTTCTTTCAAGCATGGACC_-_ATGGCCAAAGAGGGGACTTTGGCATCCTCCTCTCATTTACAGGAAGTCACAGCAGCAGAAGATACAAATACAAACAGTGGGGTAGTAACAGCAGAAAGCATCAGGTATGCATGCTATGAAGGGGAGCACCAACTTCCATTGATAATGAGCATCATTGACCAAGAACTGAGCGAACCCTACTCCATTTTCACTTACAGATATTTCACCAAGAACTGGCCTCGTCTCTGCTTTCTGGCTTTTCATGAAGACAACTGTGTGGGAACTATTGTTTGTAAAATGGGCCAGCATAGGAACACATTTCGAGGTTATATAGCAATGTTGGTGGTGATCAAACCTTATAGAGGGAAAGGAATTGCAACAGAACTTGTAACTAGAGCCATTCGAGTGATGCAGGAATCTGGTTGCGAGGAGGTAGCACTGGAGGCAGAAGTTACAAACAAGGGAGCCCTTGCATTATATGGAAATTTGGGATTTATCCGTGTAAAAAGGCTCTTTAGATATTACTTGAATGGTGTTGATGCTTTTCGGTTGAAACTATTGTTCCCACGACCTGATTTAGATTCATTGCTTATGCTAAGTGAAGAAAATTATAATATGGAATTGTCTCATCCCATTTATGAGGGGAGTGGTTATCACTGGGATCAACAGACAAACTGTTGA___TATTTATAAAGAGAGAGAGAGTGGCTTTTCTCGAAATACACTTTTGGCAAATTCATTGCTTTTCTTTGTGATGATAGTGCTTACAGCTGCATTGAGACACCCTTTTGGTGTACTCTATGGCTCTTCTTCCAATGATCTTTGCAAAGAATATCATGACATTAAGTTTTGGTTGTGTAGGTTTCAGTAAGATTTCTCTGGAAGATTCAGTGAGTATTATAATTTATTGGTCTCCCATAGTTTACCTTAGGAGTTAGGTAAGGCACGTTTTCATAGCACCTTCTGAAATCCACAGGAGATGCTTTATGATGAGTCCATTTAGGAGTTGCTTGTGTGACAACAAATAAATTATTATCCTCCCATCTTTAAACCAGCCTGCCTTCACGTTATGAAAACAGCTACAAATTCCCAATTACTTGGTTTTGAGGATGAAAATATTAAGAGTTATGCATTACTACAGTATCTGGTATCGGTTGAGATTTCATGTTAAAATTCAGTACGACTCATCCATCTTAAACTGTATACCTCATGCAATCCCACTGCTAATGGATGCTAACGATCTAGTGCAATAGAGTTCTCTCACCTATCTGTAGTTGTC

Fln Alignment:

Contig3458___MAKEGTLASSS-HLQ-EVTAAEDTNTNSG-VVTAESIRYACYEGEHQLPLIMSIIDQELSEPYSIFTYRYFTKNWPRLCFLAFHEDNCVGTIVCKMGQHRNTFRGYIAMLVVIKPYRGKGIATELVTRAIRVMQESGCEEVALEAEVTNKGALALYGNLGFIRVKRLFRYYLNGVDAFRLKLLFPRPDLDSLLMLSEENYNMELSHPIYEGSGYHWDQQTNC
D5A859______________MAKEGTLASSSLHLQQEVTAAEDTNTKTREVAAAGSIRYACYEGEHQLPLIMSIIDQELSEPYSIFTYRYFTKNWPRLCFLAFHEDNCVGTIVCKMGQHRNTFRGYIAMLVVIKPYRGKGIATELVTRAIQVMQESGCEEVALEAEVTNKGALALYGNLGFIRVKRLFRYYLNGVDAFRLKLLFPRPDLDSLLMLSEENYNMELSRPISEGSGYHWDQQTNC

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
146		52		47	1.0
210	52		47		1.0
963		14		85	0.993533
964			14	85	0.993533
1090		33		66	1.0

SSRs (tot: 1)

Start position	End position	Sequence	Length
793	804	AG AG AG AG AG AG	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain