SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3380

Length: 4197 nt

UniGene Fasta

>sp_v3.0_unigene3380
ATAATTAAGCGGTTTACCACCATCACACGGTTGTCCTTTGCAGGTTCCAGACCAACCGAGGGTTTGGAGGCGCCGATTATTTTCAGGGTTTGAACGTCGGGGCCGAGCTTTGTTGCCTACTATAGTTCTCCAATCCCTGCAGGGGGCGTCAGGATCCAAAGCTGCTCAAGTTTTAAAGAATTGAACGGCTTTACGGCTCAAATCGGAAACAAGGCTGTCACTCATTTTTATTTTATTGAAGAATTCTTTTTGGCTTTCAATTCTTAACGAAGAACGATAATGTAGATAAGCAAATGAGCCTAAAGATCAGGATTTGTTTGGCGTAATGGTGAAAATTTGTGTGGAGGCTTAAAGATCTAAGCTGTTGCAGGTTTAGAACTGGAGAAATAGGTTTTTTCGGCTGTAAATAGCCATGGGAAGAGGCGGAGAAGATTACGGCACGCAGAGCCCTGTGATCAAGCCCTCCGATCAGAAAATCTTCCCCGCTTGGGCCAGAGATGTAGAGGATTGTGCGAAAGAATTCGAAGTAGATGTCGAACAGGGGCTGAGCAGCGAAGATGTCGAGAGACGGCGGAAAATATGGGGTTGGAATGAGCTGGAAAAGCATTCGGGGCCGTCGGTTTGGAAGCTCATCCTTGATCAATTTAATGACACTCTGGTAAGAATTTTACTCGTGGCCGCTGTTGTTTCGTTTGTTCTTGCATGGATTGATGGCGATGAAGGCGGTGAAATGGATATCACTGCCTTCGTCGAGCCGCTGGTTATTTTCTTGATTTTGATTGCCAATGCTACCGTCGGCGTTTGGCAAGAGAGCAATGCGGAGAAAGCCCTAGAGGCGTTGAAGGAAATGCAGTCGGAACACGCCAAGGTGAGAAGGGACAGGCATTTCATTACGAATTTGCCTGCAAGAGAATTAGTTCCTGGTGATATCGTCGAGCTTAAAGTAGGTGATAAGGTTCCTGCCGACCTGAGGGTTTTGCATTTGATAACCTCAACCGTTAGGGTAGAGCAAAGCTCGCTAACGGGCGAAAGTATGGCTGTGAATAAGGGTCATCACAAAGTAGATTGTGAGGACGTGGAGTTGCAAGGTAAAAAATGCATGGTTTTTGCTGGAACAACGGTTGTCAATGGTACATGCATCTGTCTTGTAACGGCCACGGGGATGAATACGGAGATAGGCAAGGTTCATTCTCAGATCCACGAAGCTTCGCAGCATGATGAAGATACACCGTTGAAGAAAAAATTGAATGAGTTTGGCGAGGTTCTGACTTCCATTATCGGAGTCATCTGCGCGTTGGTCTGGCTTATCAATGTAAAGTATTTCCTCACATGGGAGTATGTAAATGGATGGCCACGAAATTTCAAATTTTCATTTGAAAAATGTACTTATTACTTCGAGATTGCTGTAGCGTTAGCTGTGGCTGCAATTCCTGAAGGTTTACCTGCAGTTATTACAACATGCTTGGCTCTTGGAACTAGAAAGATGGCTCAGAAAAACGCTATTGTGAGAAAATTACCAAGTGTAGAGACTTTAGGCTGTACCACTGTGATTTGTTCTGATAAGACTGGAACATTGACAACTAACCAGATGTCCGCAGCAAAAGTTATAGCAATAGGATCATACCCATGTTCACTCCGTGATTATACCGTTGAGGGTAGTACTTATGATCCTTGTGACGGGGTAATTCAAGATTGGCCCGAAGGGCAAATGGATGCCAATCTTCAGTCAATTGCAAAAATTGCTGCTTTGTGCAATGATGCAGGCATTGCATATACTGGTCATCAATATTGCTCTATTGGCGTTCCCACTGAAGCAGCTTTGAAGGTGCTGGTTGAAAAGATGAAATTACCAGTTTTGGGGGAGCATGTAAAGGCTCGAAAGGATGATGATCGTTCAATATCTGCAGAAATCAGTTTAGGTTGCTGTGAATGGTGGAGTCAAAGAGAACACAGAGTTGCTACTTTAGAGTTTGATCGAATGCGCAAGTCAATGGGGGTTATTGTTAAGTCAAATACAGGAAAGAACACATTGTTGGTGAAGGGTGCAGTTGAGAGTCTGCTAGAGAGAAGCTCCAAGATTCAGCTATCAGATGGAACAGTTGTTCCATTAGATGTGGACTTTCGACAGAGCATACTGCAAAAACTCAAAGGGATGACTTCAGGAGCTTTACGATGTTTAGGTTTTGCATATAAAGAAGAACTTAATGAATTCTCTACATATGATGGAGAGGAACATCCTGCCCACAAGCTTTTGCTTGATCCTGATAATTACCAATCAATTGAAAGTGATTTGATCTTTGCTGGTTTTGTAGGAATAAGGGACCCTCCACGTGCAGAGGTCCATAGAGCAATTAGTGATTGCAGAGAAGCTGGAATTCGTGTGTTTGTTATTACAGGCGATGACAAGAATACAGCAGAAGCCATATGTCATGAGATTGGGGTTTTTGAGCCAGAAGTTAATCTTCAGGACAGAAGTTTCATAGGAAGAGAGTTTATGGCTCTTCCTGATGCCAAACGTCGAGAAATTTTAAGAGGACGTAGTTGCGTGTTTTCCAGAGCTGAACCTAAGCATAAGCAAGAAATAGTTCGAATGTTGAAGGATGATGGGGAAGTAGTTGCAATGACAGGTGATGGTGTAAATGATGCTCCAGCTTTGAAGTTAGCTGACATAGGTATTGCTATGGGAATTACTGGAACAGAGGTCGCAAAGGAGGCAGCTGATATGGTCTTAGCAGATGACAATTTCAGTTCAATAGTTGCAGCTGTTGCAGAGGGGCGTTCCATATACAACAACATGAAGGCTTTTATTCGGTACATGATATCCTCAAATATTGGTGAAGTTGCTTCAATATTTCTAACTGCAGCTCTAGGCATGCCTGAGGGATTGATCCCTGTACAGCTTTTATGGGTCAATTTAGTGACTGATGGGCCACCTGCAACAGCTCTAGGTTTCAATCCACCTGATGTAGATATCATGAAAAAGCCCCCTCGAAGAAGTAATGATTCTCTGATTGATGCCTGGGTGCTGTTCCGCTACTTGGTTATTGGCATGTATGTTGGCTTGGCTACAGTTGGTATATTTGCAATATGGTATACTCATGAATCATTTTTGGGCATAAGTTTAGCAGGAGATGGTCATACACTTGTGAGCTTTTACCAACTCAGGACATGGGACCAATGTTCCTCTTGGGAGGGGTTTAAGGTGTCTCCCTTCAAGGCAGGATCACATGTTTTCTCCTTCGATGGTAATCCATGTGATTACTTCTCAACTGGCAAGGTTAAAGCTATGACCCTTTCCTTGTCTGTGCTGGTTGCAATTGAGATGTTCAATTCACTAAATGCATTATCAGAGGATGGAAGTCTTCTTGTAATGCCACCATGGGTTAACCCTTGGCTCTTATTAGCTATGTCTGTTTCATTCGGTCTCCACTTTTTGATTCTTTATGTGCCCTTCCTAGCACAAGTCTTTGGCATTGTACCCTTAAGTCTGAATGAGTGGTTTTTGGTACTGGCTGTGTCATTACCAGTGATTCTCATTGATGAGACATTGAAGTTCTTTGGGAGATATATGTCCAACAGAGGGAGAAGTCTGAGGAAACAAAAAGAAACATAATATGCCGCCTTCTTTAGTTTTTGACCTCAGCTATAATCTGATTTGAGGAATAGTAAACATTCATGATTTGGGGCTGCAGTCAGGCAACTTCCAGTACTTTTGAGAATGTTGCTATCTGAAAGAGTTGTACTTTTCTCCACTCTCAAATTTTTTTCTCTTGTTTTAAAAATTCAAAATTACGGATGTATCCATTAGAAGAGTTACATATATATCGAAACATCTAGTGTTGCTCCATAAATGCTGTTAAAGGCAAAGGCTCTATTGAAAACTAGCGTTACTCCTCGAGGCAACAGCTCTATTGAAAATTGTGCCATATATAACTATTTAGGTGATGTGGAAGGATGGAACTGTCGTCAGAATCTCTTTGCTGCATCATGTTCACAAAGTATATGCATGACCCCAGCAATAGCTTTTATGATTTGTCAAGTCAACCTGATTGATTTGTAATATTTAATAACCATGCATGGAAATTTGTTTCTTTATTCTCTGTAAATTAACTTTGATATTTTGTGGCACTTGAGCATTAATTGCGTGCAACCTTTATACACTAAAGGTTTTCCTAGTAGTATGCCTGGAAGGACGTG

Ace file of the UniGene sp_v3.0_unigene3380

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Endoplasmic reticulum [ER]-type calcium ATPase n=2 Tax=Populus trichocarpa RepID=B9HPP7_POPTR	-	-	0.0	72%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	97%
Sma3	Endoplasmic reticulum [ER]-type calcium ATPase	-	-	7.134e-20	-

Source	ECs	Term	Type	e value	Identity
Sma3	Calcium-transporting ATPase.	EC:3.6.3.8	-	1.287e-26	-

Source	Gene names
Sma3	ACA3; ACA5; ACA6; AT1G10130; A_TM018A10.4; At1g07670; At1g07810; At1g10130; At4g00900; CA1; CA5; CA6; CA7; CHLREDRAFT_121540; CHLREDRAFT_77047; ECA; ECA1; ECA2; ECA3; ECA4; F14N23.1; F24B9.9; GSVIVT00008659001; GSVIVT00014975001; GSVIVT00023099001; GSVIVT

Source	GOs	Term	Type	Identity
Sma3	Golgi apparatus	GO:0005794	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	endomembrane system	GO:0012505	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	integral to endoplasmic reticulum membrane	GO:0030176	Cellular Component	-
Sma3	late endosome membrane	GO:0031902	Cellular Component	-
Sma3	magnesium ion binding	GO:0000287	Molecular Function	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	calcium-transporting ATPase activity	GO:0005388	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	manganese-transporting ATPase activity	GO:0015410	Molecular Function	-
Sma3	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	GO:0015662	Molecular Function	-
Sma3	ATP biosynthetic process	GO:0006754	Biological Process	-
Sma3	cation transport	GO:0006812	Biological Process	-
Sma3	calcium ion transport	GO:0006816	Biological Process	-
Sma3	manganese ion transport	GO:0006828	Biological Process	-
Sma3	root development	GO:0048364	Biological Process	-
Sma3	manganese ion homeostasis	GO:0055071	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	ATPase, P-type, H+ transporting proton pump	IPR000695	-	-
Sma3	ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter	IPR001757	-	-
Sma3	ATPase, P-type cation-transporter, N-terminal	IPR004014	-	-
Sma3	ATPase, P-type, calcium-transporting	IPR005782	-	-
Sma3	Haloacid dehalogenase-like hydrolase	IPR005834	-	-
Sma3	ATPase, P-type cation-transporter, C-terminal	IPR006068	-	-
Sma3	ATPase, P-type cation exchange, alpha subunit	IPR006069	-	-
Sma3	ATPase, P-type, ATPase-associated domain	IPR008250	-	-
Sma3	ATPase, P-type phosphorylation site	IPR018303	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G07670.1	ATECA4, ECA4 endomembrane-type CA-ATPase 4 chr1:2370305-2374196 REVERSE LENGTH=1061	73%
RefSeq	Arabidopsis thaliana	NP_172246.3	Ca2+-transporting ATPase [Arabidopsis thaliana]	73%
RefSeq	Populus trichocarpa	XP_002314209.1	endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa]	73%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AEI1

Fln msg: your sequence is longer than subject: 1067 - 340

Fln protein: MGRGGEDYGTQSPVIKPSDQKIFPAWARDVEDCAKEFEVDVEQGLSSEDVERRRKIWGWNELEKHSGPSVWKLILDQFNDTLVRILLVAAVVSFVLAWIDGDEGGEMDITAFVEPLVIFLILIANATVGVWQESNAEKALEALKEMQSEHAKVRRDRHFITNLPARELVPGDIVELKVGDKVPADLRVLHLITSTVRVEQSSLTGESMAVNKGHHKVDCEDVELQGKKCMVFAGTTVVNGTCICLVTATGMNTEIGKVHSQIHEASQHDEDTPLKKKLNEFGEVLTSIIGVICALVWLINVKYFLTWEYVNGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSAAKVIAIGSYPCSLRDYTVEGSTYDPCDGVIQDWPEGQMDANLQSIAKIAALCNDAGIAYTGHQYCSIGVPTEAALKVLVEKMKLPVLGEHVKARKDDDRSISAEISLGCCEWWSQREHRVATLEFDRMRKSMGVIVKSNTGKNTLLVKGAVESLLERSSKIQLSDGTVVPLDVDFRQSILQKLKGMTSGALRCLGFAYKEELNEFSTYDGEEHPAHKLLLDPDNYQSIESDLIFAGFVGIRDPPRAEVHRAISDCREAGIRVFVITGDDKNTAEAICHEIGVFEPEVNLQDRSFIGREFMALPDAKRREILRGRSCVFSRAEPKHKQEIVRMLKDDGEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEAADMVLADDNFSSIVAAVAEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGMPEGLIPVQLLWVNLVTDGPPATALGFNPPDVDIMKKPPRRSNDSLIDAWVLFRYLVIGMYVGLATVGIFAIWYTHESFLGISLAGDGHTLVSFYQLRTWDQCSSWEGFKVSPFKAGSHVFSFDGNPCDYFSTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLVMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWFLVLAVSLPVILIDETLKFFGRYMSNRGRSLRKQKET*

Protein Length: 1068

Fln nts: ATAATTAAGCGGTTTACCACCATCACACGGTTGTCCTTTGCAGGTTCCAGACCAACCGAGGGTTTGGAGGCGCCGATTATTTTCAGGGTTTGAACGTCGGGGCCGAGCTTTGTTGCCTACTATAGTTCTCCAATCCCTGCAGGGGGCGTCAGGATCCAAAGCTGCTCAAGTTTTAAAGAATTGAACGGCTTTACGGCTCAAATCGGAAACAAGGCTGTCACTCATTTTTATTTTATTGAAGAATTCTTTTTGGCTTTCAATTCTTAACGAAGAACGATAATGTAGATAAGCAAATGAGCCTAAAGATCAGGATTTGTTTGGCGTAATGGTGAAAATTTGTGTGGAGGCTTAAAGATCTAAGCTGTTGCAGGTTTAGAACTGGAGAAATAGGTTTTTTCGGCTGTAAATAGCC_-_ATGGGAAGAGGCGGAGAAGATTACGGCACGCAGAGCCCTGTGATCAAGCCCTCCGATCAGAAAATCTTCCCCGCTTGGGCCAGAGATGTAGAGGATTGTGCGAAAGAATTCGAAGTAGATGTCGAACAGGGGCTGAGCAGCGAAGATGTCGAGAGACGGCGGAAAATATGGGGTTGGAATGAGCTGGAAAAGCATTCGGGGCCGTCGGTTTGGAAGCTCATCCTTGATCAATTTAATGACACTCTGGTAAGAATTTTACTCGTGGCCGCTGTTGTTTCGTTTGTTCTTGCATGGATTGATGGCGATGAAGGCGGTGAAATGGATATCACTGCCTTCGTCGAGCCGCTGGTTATTTTCTTGATTTTGATTGCCAATGCTACCGTCGGCGTTTGGCAAGAGAGCAATGCGGAGAAAGCCCTAGAGGCGTTGAAGGAAATGCAGTCGGAACACGCCAAGGTGAGAAGGGACAGGCATTTCATTACGAATTTGCCTGCAAGAGAATTAGTTCCTGGTGATATCGTCGAGCTTAAAGTAGGTGATAAGGTTCCTGCCGACCTGAGGGTTTTGCATTTGATAACCTCAACCGTTAGGGTAGAGCAAAGCTCGCTAACGGGCGAAAGTATGGCTGTGAATAAGGGTCATCACAAAGTAGATTGTGAGGACGTGGAGTTGCAAGGTAAAAAATGCATGGTTTTTGCTGGAACAACGGTTGTCAATGGTACATGCATCTGTCTTGTAACGGCCACGGGGATGAATACGGAGATAGGCAAGGTTCATTCTCAGATCCACGAAGCTTCGCAGCATGATGAAGATACACCGTTGAAGAAAAAATTGAATGAGTTTGGCGAGGTTCTGACTTCCATTATCGGAGTCATCTGCGCGTTGGTCTGGCTTATCAATGTAAAGTATTTCCTCACATGGGAGTATGTAAATGGATGGCCACGAAATTTCAAATTTTCATTTGAAAAATGTACTTATTACTTCGAGATTGCTGTAGCGTTAGCTGTGGCTGCAATTCCTGAAGGTTTACCTGCAGTTATTACAACATGCTTGGCTCTTGGAACTAGAAAGATGGCTCAGAAAAACGCTATTGTGAGAAAATTACCAAGTGTAGAGACTTTAGGCTGTACCACTGTGATTTGTTCTGATAAGACTGGAACATTGACAACTAACCAGATGTCCGCAGCAAAAGTTATAGCAATAGGATCATACCCATGTTCACTCCGTGATTATACCGTTGAGGGTAGTACTTATGATCCTTGTGACGGGGTAATTCAAGATTGGCCCGAAGGGCAAATGGATGCCAATCTTCAGTCAATTGCAAAAATTGCTGCTTTGTGCAATGATGCAGGCATTGCATATACTGGTCATCAATATTGCTCTATTGGCGTTCCCACTGAAGCAGCTTTGAAGGTGCTGGTTGAAAAGATGAAATTACCAGTTTTGGGGGAGCATGTAAAGGCTCGAAAGGATGATGATCGTTCAATATCTGCAGAAATCAGTTTAGGTTGCTGTGAATGGTGGAGTCAAAGAGAACACAGAGTTGCTACTTTAGAGTTTGATCGAATGCGCAAGTCAATGGGGGTTATTGTTAAGTCAAATACAGGAAAGAACACATTGTTGGTGAAGGGTGCAGTTGAGAGTCTGCTAGAGAGAAGCTCCAAGATTCAGCTATCAGATGGAACAGTTGTTCCATTAGATGTGGACTTTCGACAGAGCATACTGCAAAAACTCAAAGGGATGACTTCAGGAGCTTTACGATGTTTAGGTTTTGCATATAAAGAAGAACTTAATGAATTCTCTACATATGATGGAGAGGAACATCCTGCCCACAAGCTTTTGCTTGATCCTGATAATTACCAATCAATTGAAAGTGATTTGATCTTTGCTGGTTTTGTAGGAATAAGGGACCCTCCACGTGCAGAGGTCCATAGAGCAATTAGTGATTGCAGAGAAGCTGGAATTCGTGTGTTTGTTATTACAGGCGATGACAAGAATACAGCAGAAGCCATATGTCATGAGATTGGGGTTTTTGAGCCAGAAGTTAATCTTCAGGACAGAAGTTTCATAGGAAGAGAGTTTATGGCTCTTCCTGATGCCAAACGTCGAGAAATTTTAAGAGGACGTAGTTGCGTGTTTTCCAGAGCTGAACCTAAGCATAAGCAAGAAATAGTTCGAATGTTGAAGGATGATGGGGAAGTAGTTGCAATGACAGGTGATGGTGTAAATGATGCTCCAGCTTTGAAGTTAGCTGACATAGGTATTGCTATGGGAATTACTGGAACAGAGGTCGCAAAGGAGGCAGCTGATATGGTCTTAGCAGATGACAATTTCAGTTCAATAGTTGCAGCTGTTGCAGAGGGGCGTTCCATATACAACAACATGAAGGCTTTTATTCGGTACATGATATCCTCAAATATTGGTGAAGTTGCTTCAATATTTCTAACTGCAGCTCTAGGCATGCCTGAGGGATTGATCCCTGTACAGCTTTTATGGGTCAATTTAGTGACTGATGGGCCACCTGCAACAGCTCTAGGTTTCAATCCACCTGATGTAGATATCATGAAAAAGCCCCCTCGAAGAAGTAATGATTCTCTGATTGATGCCTGGGTGCTGTTCCGCTACTTGGTTATTGGCATGTATGTTGGCTTGGCTACAGTTGGTATATTTGCAATATGGTATACTCATGAATCATTTTTGGGCATAAGTTTAGCAGGAGATGGTCATACACTTGTGAGCTTTTACCAACTCAGGACATGGGACCAATGTTCCTCTTGGGAGGGGTTTAAGGTGTCTCCCTTCAAGGCAGGATCACATGTTTTCTCCTTCGATGGTAATCCATGTGATTACTTCTCAACTGGCAAGGTTAAAGCTATGACCCTTTCCTTGTCTGTGCTGGTTGCAATTGAGATGTTCAATTCACTAAATGCATTATCAGAGGATGGAAGTCTTCTTGTAATGCCACCATGGGTTAACCCTTGGCTCTTATTAGCTATGTCTGTTTCATTCGGTCTCCACTTTTTGATTCTTTATGTGCCCTTCCTAGCACAAGTCTTTGGCATTGTACCCTTAAGTCTGAATGAGTGGTTTTTGGTACTGGCTGTGTCATTACCAGTGATTCTCATTGATGAGACATTGAAGTTCTTTGGGAGATATATGTCCAACAGAGGGAGAAGTCTGAGGAAACAAAAAGAAACATAA___TATGCCGCCTTCTTTAGTTTTTGACCTCAGCTATAATCTGATTTGAGGAATAGTAAACATTCATGATTTGGGGCTGCAGTCAGGCAACTTCCAGTACTTTTGAGAATGTTGCTATCTGAAAGAGTTGTACTTTTCTCCACTCTCAAATTTTTTTCTCTTGTTTTAAAAATTCAAAATTACGGATGTATCCATTAGAAGAGTTACATATATATCGAAACATCTAGTGTTGCTCCATAAATGCTGTTAAAGGCAAAGGCTCTATTGAAAACTAGCGTTACTCCTCGAGGCAACAGCTCTATTGAAAATTGTGCCATATATAACTATTTAGGTGATGTGGAAGGATGGAACTGTCGTCAGAATCTCTTTGCTGCATCATGTTCACAAAGTATATGCATGACCCCAGCAATAGCTTTTATGATTTGTCAAGTCAACCTGATTGATTTGTAATATTTAATAACCATGCATGGAAATTTGTTTCTTTATTCTCTGTAAATTAACTTTGATATTTTGTGGCACTTGAGCATTAATTGCGTGCAACCTTTATACACTAAAGGTTTTCCTAGTAGTATGCCTGGAAGGACGTG

Fln Alignment:

Contig3380___MLKDDGEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEAADMVLADDNFSSIVAAVAEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGMPEGLIPVQLLWVNLVTDGPPATALGFNPPDVDIMKKPPRRSNDSLIDAWVLFRYLVIGMYVGLATVGIFAIWYTHESFLGISLAGDGHTLVSFYQLRTWDQCSSWEGFKVSPFKAGSHVFSFDGNPCDYFSTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLVMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWFLVLAVSLPVILIDETLKFFGRYMSNRGRSLRKQKET
D5AEI1______________MLKDDGEVVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEAADMVLADDNFSSIVAAVAEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGMPEGLIPVQLLWVNLVTDGPPATALGFNPPDVDIMKKPPRRSNDSLIDAWVLFRYLVIGLYVGLATVGIFAIWYTHESFLGISLVGDGHTLVSFSQLRTWDQCSSWEGFKVSPFNAGSHVFSFDANPCDYFSTGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLVVMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVSLPVILIDETLKFFGRYMSNRGRYLKKKKET

SNPs (tot: 42)

Position	A %	C %	G %	T %	Probability
519	85			14	0.993533
606	20		80		0.999996
633		81		18	0.999994
731	88		11		0.923564
805		75		25	0.996473
1016	70		30		1.0
1220	33		66		1.0
1236	16			83	0.994512
1239	83		16		0.994512
1240	83		16		0.994512
1427		14		85	0.993533
1873			85	14	0.993533
1934	88	11			0.923564
1935	88			11	0.923564
1941			88	11	0.923564
1943		11	88		0.923564
2781		11	77		0.968132
2928	11			88	0.923564
2929		11	88		0.923564
2932			87	12	0.992554
2981		13		86	0.999973
2982	13		86		0.999973
2983	84			15	0.999986
3198	16		83		0.994512
3302	12	87			0.992554
3505		73		13	0.999956
3619			75	25	1.0
3625			25	75	1.0
3626		25		75	1.0
3628			11	88	0.923564
3631			14	85	0.993533
3633			14	85	0.993533
3635		16	83		0.994512
3636		16		83	0.994512
3639			16	83	0.994512
3642	83	16			0.994512
3643		83		16	0.994512
3644		83	16		0.994512
3727			16	83	0.994512
3743		66		33	1.0
3784	50			50	1.0
4134		50		50	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain