SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3139

Length: 3437 nt

UniGene Fasta

>sp_v3.0_unigene3139
GTGACCTGGGTAACTCTCCAAATCGCCCTCGCAGAAGGATCCATCACTCGAAGGATAGTGGTAAAGGGTAAAAGCTCAGCACCCAGTAGTCCACCTCTGTATGCTCTAAAGAGAGAGAAGACCCTATCCCTACAGGCAGTATCAACTCATTGGTCAGGGATAAGGCCATTGGTTCATTGCTAAGGGTGGAAGTGGAACTCTGGATAGTGTTCTAGACTTTTGGTGTTGTCTGGAGGTGCAAAGGATGACAGAAGGAGAGACAATAGCGAATTGTATAAACACAAGAGAATCATATAATTGAGGTTCAGAGAAAGAAGTGGAAGAAATGGAGGTCATTGTGTGCATTTGTTTGTTGTTGTTATTGTCAATTTATCAGTCAAAATCTGATACTGCTTTTACTCCACAGGATAACTACCTTATAGACTGTGGATCAAAGAGTAACATCACAGTGGGTAGAAGGATCTTCACTGCAGATACCCCCTCCTCATATTTGTCGATTTCCACCAATGAAGAAATCTTTGCTAACACCACAACTTCCAATCTACAGGTTCCTTCTGGTATCTATTTGACAGCTCGAGTGTTTACTCAGCAGTCATCCTATACCTTCAGTATTGGGCAGCAGGGCAGACACTGGGTACGTTTACATTTCTTTCCATTCTCTTATCAAAAGTACAATCTTACAAATGCCATATTTTCAATAGCCACGCAAGACTTTGGTCTACTGTACAATTTCCAAATCCAGAATAGTTCACACGTGATGAAGGAATATCTCATCAATATAACTGAACAAACATTGGTCCTGACCTTTATTCCAGCCAATAATTCCTTAGCGTTTGTCAATGCCATTGAAGTTGTTTCTGTGCCGGATGCTCTTGTTTCAGACACAGCTCAAACTGTGCCCCAGTCTAATACTTACAGTGGTCTATCTGAGCATGCTTTTGAAACAATTTATAGACTTAATATGGGAGGACCCTTGATTACCCCTGACAATGACACCCTTGGGAGATTTTGGGATCCTGATACAAGCTTCCTAGCTCCAAAATCATTTGCCCAAAACGTCAGCACTTCTGCCAACAATGTTGTGTACCAAGAACTAGTTACCAGTGAGATTGCTCCCAATCTCGTATATGCTACTGCTGAGGAGATGGCTATAGCCAATGTAACAAACCCAAATTTCAACATTTCGTGGTTGTTTACTGTGGATCCAGACTACCAATACTTCATTCGGATGCATTTCTGCGATATTGTGAGTACTGCACTGGATGAGCTATACTTCAATATATATATCAACAATGCTAACGTTTTCCATGATTTTGATATATCAACTGAAACACAACAAACCTTGGCAGCTGCTTATTACATCGATTTTGTAGTGGTTAATACACCTACCGGATTGAAAAATCTTTCTGTCAAAGTTGGACCTGCAGTAGATAGGTCGAATATTGCTCCCAATGCCATACTAAATGGGCTGGAGGTTATGAAGATCAGCAACTCTAAAAGAAGTCTTGATGGATCTTTCTCACCAAACAGTTCTATCAGATCAAAGAGCAATAGCAAGGTTGGTCCAATAGTTGGATCAGTTGTAGGAGCTTTTGTTGCTATTGGGCTGTTAACGGTGATCTACTTTTTCTGTTGTTGTCGTAGATCTCGTACAAAACTCTCTACTATAACTTGGTTACCTCTTCCACTACATGGAGGACATTCTGAAACTATAGGAAGCAAGGGAAGCAAGGTATCTGCTGGGAGTCATGCTTCTTCTGGACCTTCAAATCTAGGCCGACACTTCACATTTGCAGAGATAGTAGAAGCTACCAAAAGCTTTGATGAGAGTTTGATTCTGGGTGTAGGTGGGTTTGGTAAAGTATTCAGTGGGATGCTTGAAGATGGTACCAAAGTGGCTGTAAAACGTGGTAATCGAAGTTCTGGACAAGGCATGGCAGAATTTCAGACTGAAATTGAAATGCTGTCTAAGCTTCGCCACCGTCATCTGGTTTCTCTTATTGGCTATTGTGAGGAGAACTGTGAGATGATTTTGGTTTATGAATACATGGCCAATGGGCCTCTTAGGAGCCATTTGTATGGATCAGATCTTCCTCCTATGTCATGGAAGCAGAGGCTTGATATATGCATAGGGGCTGCTAGGGGTCTGCACTACCTTCACACAGGAGCAGATCAGGGAATCATTCACCGTGATGTAAAGACAACTAACATTTTGTTGGATGAGAATTTTGTGGCCAAGGTGGCAGACTTCGGGCTTTCAAAGACTGGACCTGCTCTGGACGAAACCCATGTGAGTACTGCAGTCAAAGGTAGCTTTGGTTATCTTGACCCCGAGTACTTCAGAAGGCAGCAATTGACAGAAAAATCTGATGTCTACTCCTTTGGAGTAGTGCTAATGGAGGTACTATGTGCAAGGCCAGCCATCAATCCTTCTCTTCCCAGAGAGAAAGTCAATATAGCAGAGTGGGCAATGCATTGGCAAAGGAGAGGCATGCTTGGCCAAATTATTGATCATCATCTTGTAAATACAATCAACCCTAACTCCCTGAGAAAGTTTGGGGAGACGGCTGAAAAGTGTTTGGCTGACCAGGGTATTGACAGACCCACTATGGGTGATGTGCTGTGGAACTTAGAATACGCCCTTCAACTTCAGGAAACTGCCATGCTGAACGATCCAGATGAAAACAGTGCTAATCGCCTTTCAGAGATTCCCTTACGCTTTTCTCAGGAAGAGAATTTTGGTGATAGTGCTATTGAGAGGGTTAGTGTTGCTGTAAGTGAAGAAGGTTCAGAAGGTGCAACTGCAAGTACAGTATTTTCACAATTAGTTAATCCTCATGGAAGGTGATCACAGAAATTTTGTGTGTGGTGATTCATTCACCAACTTATGTGAGCTGGCCATTGTGATACAAATTAGTGATCACCTTCAGAAAATCTTAATGCTTCATTGGTCTTCACTCCTAAGACCAAATCTTCAGTTTCGTTTTAAAAGCACTTGCTGCATACCTCACGGGCCACGGCCATCCAAATCCCATATGGATTAATTTTCCTAGATTTTCTTCCTTAATTTTTAAGGTTTGAAATTCTACCTTACAAATATGCACTATTCAGTGGTATTTCTTGTGTACTGGAACACTTTGGCTTTTTCCAGTACACAAGAAATACCACTAAATAGTACATATTTAGTGGCCTTTTCTAATATGTACCTAATATGTAGATTAAGGTGTGAGGTACTATTTAAGATTAAGATTTTTCTATCAGATTATACCTCGTGGCTGGGGTGCTTCTTTCGCTATTGTAAAGATCATCTATCTTAATTGGACTGTAAATCAGGTCATGGCTATGGAAAGAAGCCATGTTGATGCAATTTTATTTTTTGCATTTTATGCTGAATTTAGATACTATTGTTCTGCACCACTAAAACTCAATTTGGCAAG

Ace file of the UniGene sp_v3.0_unigene3139

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana] sp\|Q9LK35.1\|THE1_ARATH RecName: Full=Receptor-like protein kinase THESEUS 1; Flags: Precursor dbj\|BAA98098.1\| receptor-protein kinase-like protein [Arabidopsis thaliana] gb\|AED96490.1\| receptor	-	-	0.0	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Sma3	FERONIA receptor-like kinase	-	-	3.696e-18	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific protein-tyrosine kinase.	EC:2.7.10.2	-	4.591e-15	-

Source	Gene names
Sma3	AT4g39110; At1g30570; At2g21480; At2g39360; At3g46290; At3g51550; At4g39110; At5g24010; At5g54380; At5g59700; At5g61350; B1143G03.32; F12M12.260; F18L15.10; F19H22.210; F26O13.190; FER; Fen; GSVIVT00006178001; GSVIVT00016292001; GSVIVT00019573001; GSVIVT0

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	protein kinase activity	GO:0004672	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	protein autophosphorylation	GO:0046777	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Peptidase aspartic, active site	IPR001969	-	-
Sma3	Isopenicillin N synthase, conserved site	IPR002057	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Immunoglobulin/major histocompatibility complex, conserved site	IPR003006	-	-
Sma3	Peptidase S16, lon N-terminal	IPR003111	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Tetratricopeptide-like helical	IPR011990	-	-
Sma3	SKG6/AXL2 alpha-helix transmembrane domain	IPR014805	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Zinc finger, RING-type, conserved site	IPR017907	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G54380.1	THE1 protein kinase family protein chr5:22077313-22079880 REVERSE LENGTH=855	58%
RefSeq	Arabidopsis thaliana	NP_200249.1	receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana]	58%
RefSeq	Populus trichocarpa	XP_002316926.1	predicted protein [Populus trichocarpa]	58%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKY1

Fln msg: your sequence is longer than subject: 841 - 431

Fln protein: MEVIVCICLLLLLSIYQSKSDTAFTPQDNYLIDCGSKSNITVGRRIFTADTPSSYLSISTNEEIFANTTTSNLQVPSGIYLTARVFTQQSSYTFSIGQQGRHWVRLHFFPFSYQKYNLTNAIFSIATQDFGLLYNFQIQNSSHVMKEYLINITEQTLVLTFIPANNSLAFVNAIEVVSVPDALVSDTAQTVPQSNTYSGLSEHAFETIYRLNMGGPLITPDNDTLGRFWDPDTSFLAPKSFAQNVSTSANNVVYQELVTSEIAPNLVYATAEEMAIANVTNPNFNISWLFTVDPDYQYFIRMHFCDIVSTALDELYFNIYINNANVFHDFDISTETQQTLAAAYYIDFVVVNTPTGLKNLSVKVGPAVDRSNIAPNAILNGLEVMKISNSKRSLDGSFSPNSSIRSKSNSKVGPIVGSVVGAFVAIGLLTVIYFFCCCRRSRTKLSTITWLPLPLHGGHSETIGSKGSKVSAGSHASSGPSNLGRHFTFAEIVEATKSFDESLILGVGGFGKVFSGMLEDGTKVAVKRGNRSSGQGMAEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYEYMANGPLRSHLYGSDLPPMSWKQRLDICIGAARGLHYLHTGADQGIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDETHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCARPAINPSLPREKVNIAEWAMHWQRRGMLGQIIDHHLVNTINPNSLRKFGETAEKCLADQGIDRPTMGDVLWNLEYALQLQETAMLNDPDENSANRLSEIPLRFSQEENFGDSAIERVSVAVSEEGSEGATASTVFSQLVNPHGR*

Protein Length: 842

Fln nts: GTGACCTGGGTAACTCTCCAAATCGCCCTCGCAGAAGGATCCATCACTCGAAGGATAGTGGTAAAGGGTAAAAGCTCAGCACCCAGTAGTCCACCTCTGTATGCTCTAAAGAGAGAGAAGACCCTATCCCTACAGGCAGTATCAACTCATTGGTCAGGGATAAGGCCATTGGTTCATTGCTAAGGGTGGAAGTGGAACTCTGGATAGTGTTCTAGACTTTTGGTGTTGTCTGGAGGTGCAAAGGATGACAGAAGGAGAGACAATAGCGAATTGTATAAACACAAGAGAATCATATAATTGAGGTTCAGAGAAAGAAGTGGAAGAA_-_ATGGAGGTCATTGTGTGCATTTGTTTGTTGTTGTTATTGTCAATTTATCAGTCAAAATCTGATACTGCTTTTACTCCACAGGATAACTACCTTATAGACTGTGGATCAAAGAGTAACATCACAGTGGGTAGAAGGATCTTCACTGCAGATACCCCCTCCTCATATTTGTCGATTTCCACCAATGAAGAAATCTTTGCTAACACCACAACTTCCAATCTACAGGTTCCTTCTGGTATCTATTTGACAGCTCGAGTGTTTACTCAGCAGTCATCCTATACCTTCAGTATTGGGCAGCAGGGCAGACACTGGGTACGTTTACATTTCTTTCCATTCTCTTATCAAAAGTACAATCTTACAAATGCCATATTTTCAATAGCCACGCAAGACTTTGGTCTACTGTACAATTTCCAAATCCAGAATAGTTCACACGTGATGAAGGAATATCTCATCAATATAACTGAACAAACATTGGTCCTGACCTTTATTCCAGCCAATAATTCCTTAGCGTTTGTCAATGCCATTGAAGTTGTTTCTGTGCCGGATGCTCTTGTTTCAGACACAGCTCAAACTGTGCCCCAGTCTAATACTTACAGTGGTCTATCTGAGCATGCTTTTGAAACAATTTATAGACTTAATATGGGAGGACCCTTGATTACCCCTGACAATGACACCCTTGGGAGATTTTGGGATCCTGATACAAGCTTCCTAGCTCCAAAATCATTTGCCCAAAACGTCAGCACTTCTGCCAACAATGTTGTGTACCAAGAACTAGTTACCAGTGAGATTGCTCCCAATCTCGTATATGCTACTGCTGAGGAGATGGCTATAGCCAATGTAACAAACCCAAATTTCAACATTTCGTGGTTGTTTACTGTGGATCCAGACTACCAATACTTCATTCGGATGCATTTCTGCGATATTGTGAGTACTGCACTGGATGAGCTATACTTCAATATATATATCAACAATGCTAACGTTTTCCATGATTTTGATATATCAACTGAAACACAACAAACCTTGGCAGCTGCTTATTACATCGATTTTGTAGTGGTTAATACACCTACCGGATTGAAAAATCTTTCTGTCAAAGTTGGACCTGCAGTAGATAGGTCGAATATTGCTCCCAATGCCATACTAAATGGGCTGGAGGTTATGAAGATCAGCAACTCTAAAAGAAGTCTTGATGGATCTTTCTCACCAAACAGTTCTATCAGATCAAAGAGCAATAGCAAGGTTGGTCCAATAGTTGGATCAGTTGTAGGAGCTTTTGTTGCTATTGGGCTGTTAACGGTGATCTACTTTTTCTGTTGTTGTCGTAGATCTCGTACAAAACTCTCTACTATAACTTGGTTACCTCTTCCACTACATGGAGGACATTCTGAAACTATAGGAAGCAAGGGAAGCAAGGTATCTGCTGGGAGTCATGCTTCTTCTGGACCTTCAAATCTAGGCCGACACTTCACATTTGCAGAGATAGTAGAAGCTACCAAAAGCTTTGATGAGAGTTTGATTCTGGGTGTAGGTGGGTTTGGTAAAGTATTCAGTGGGATGCTTGAAGATGGTACCAAAGTGGCTGTAAAACGTGGTAATCGAAGTTCTGGACAAGGCATGGCAGAATTTCAGACTGAAATTGAAATGCTGTCTAAGCTTCGCCACCGTCATCTGGTTTCTCTTATTGGCTATTGTGAGGAGAACTGTGAGATGATTTTGGTTTATGAATACATGGCCAATGGGCCTCTTAGGAGCCATTTGTATGGATCAGATCTTCCTCCTATGTCATGGAAGCAGAGGCTTGATATATGCATAGGGGCTGCTAGGGGTCTGCACTACCTTCACACAGGAGCAGATCAGGGAATCATTCACCGTGATGTAAAGACAACTAACATTTTGTTGGATGAGAATTTTGTGGCCAAGGTGGCAGACTTCGGGCTTTCAAAGACTGGACCTGCTCTGGACGAAACCCATGTGAGTACTGCAGTCAAAGGTAGCTTTGGTTATCTTGACCCCGAGTACTTCAGAAGGCAGCAATTGACAGAAAAATCTGATGTCTACTCCTTTGGAGTAGTGCTAATGGAGGTACTATGTGCAAGGCCAGCCATCAATCCTTCTCTTCCCAGAGAGAAAGTCAATATAGCAGAGTGGGCAATGCATTGGCAAAGGAGAGGCATGCTTGGCCAAATTATTGATCATCATCTTGTAAATACAATCAACCCTAACTCCCTGAGAAAGTTTGGGGAGACGGCTGAAAAGTGTTTGGCTGACCAGGGTATTGACAGACCCACTATGGGTGATGTGCTGTGGAACTTAGAATACGCCCTTCAACTTCAGGAAACTGCCATGCTGAACGATCCAGATGAAAACAGTGCTAATCGCCTTTCAGAGATTCCCTTACGCTTTTCTCAGGAAGAGAATTTTGGTGATAGTGCTATTGAGAGGGTTAGTGTTGCTGTAAGTGAAGAAGGTTCAGAAGGTGCAACTGCAAGTACAGTATTTTCACAATTAGTTAATCCTCATGGAAGGTGA___TCACAGAAATTTTGTGTGTGGTGATTCATTCACCAACTTATGTGAGCTGGCCATTGTGATACAAATTAGTGATCACCTTCAGAAAATCTTAATGCTTCATTGGTCTTCACTCCTAAGACCAAATCTTCAGTTTCGTTTTAAAAGCACTTGCTGCATACCTCACGGGCCACGGCCATCCAAATCCCATATGGATTAATTTTCCTAGATTTTCTTCCTTAATTTTTAAGGTTTGAAATTCTACCTTACAAATATGCACTATTCAGTGGTATTTCTTGTGTACTGGAACACTTTGGCTTTTTCCAGTACACAAGAAATACCACTAAATAGTACATATTTAGTGGCCTTTTCTAATATGTACCTAATATGTAGATTAAGGTGTGAGGTACTATTTAAGATTAAGATTTTTCTATCAGATTATACCTCGTGGCTGGGGTGCTTCTTTCGCTATTGTAAAGATCATCTATCTTAATTGGACTGTAAATCAGGTCATGGCTATGGAAAGAAGCCATGTTGATGCAATTTTATTTTTTGCATTTTATGCTGAATTTAGATACTATTGTTCTGCACCACTAAAACTCAATTTGGCAAG

Fln Alignment:

Contig3139___FTFAEIVEATKSFDESLILGVGGFGKVFSGMLED----------GTKVAVKRGNRSSGQGMAEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYEYMANGPLRSHLYGSDLPPMSWKQRLDICIGAARGLHYLHTGADQGIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDETHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCARPAINPSLPREKVNIAEWAM-HWQRRGMLGQIIDHHLVNTINPNSLRKFGETAEKCLADQGIDRPTMGDVLWNLEYALQLQETA
B8LKY1______________FTFNELKSATRNFRPESVLGGGGFGYVFKGWIEENGTAAVKPGTGLTVAVKTLNPDGLQGHKEWLAEVNFLGQLRHANLVKLIGYCIEDNQRLLVYEYMPRGSLENHLFRKGALPLPWSTRMKIALGAAKGLEFLHGGAEKAVIYRDFKTSNILLDSEYNAKLSDFGLARDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKHRSNGEQNLVEWARPYLVDKRKLYRLVDPRLSGHYSIKGAQKVAQLAHYCLSRDPKARPTMNDVVEVLTPLLSLKDTA

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
492		11		88	0.923564
495		77		22	0.999999
499			11	88	0.923564
500	11			88	0.923564
503	88			11	0.923564
504		88		11	0.923564
505		88	11		0.923564
506	88		11		0.923564
507	88	11			0.923564
511	88	11			0.923564
513		11	88		0.923564
514	88			11	0.923564
515	88	11			0.923564
764	14		85		0.993533
888	14		85		0.993533
889		85		14	0.993533
890			14	85	0.993533
891		85		14	0.993533
1422	16		83		0.994512
1437			33	66	1.0
1528	83		16		0.994512
1589	16		83		0.994512
1590		16	83		0.994512
1592			83	16	0.994512
1593		83		16	0.994512
1927	16			83	0.994512
1928	16		83		0.994512
1929			83	16	0.994512
1930	83		16		0.994512
1931		83		16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain