SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene2680

Length: 1534 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v3.0_unigene2680 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Annexin P35 n=1 Tax=Elaeis guineensis RepID=B3TLY9_ELAGV	-	-	0.0	61%
FL-Next	sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	71%
Sma3	Annexin	-	-	2.064e-33	-

Source	Gene names
Sma3	80A08_19; 80A08_20; AN34; AN35; ANN1; ANN2; ANN3; ANN6; ANN7; ANNAT1; ANNAT2; ANNAT3; ANNAT6; ANNAT7; ANX23-ATH; AT1G35720; ATOXY5; Ann1; AnnGh1; AnnGh2; Anx1; Anx3; AnxLt1; At1g35720; At2g38760; At5g10220; At5g10230; At5g12380; At5g65020; B1111E11.5; F14

Source	GOs	Term	Type	Identity
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	vacuole	GO:0005773	Cellular Component	-
Sma3	cytosol	GO:0005829	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast stroma	GO:0009570	Cellular Component	-
Sma3	thylakoid	GO:0009579	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	apoplast	GO:0048046	Cellular Component	-
Sma3	peroxidase activity	GO:0004601	Molecular Function	-
Sma3	copper ion binding	GO:0005507	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	calcium-dependent phospholipid binding	GO:0005544	Molecular Function	-
Sma3	protein homodimerization activity	GO:0042803	Molecular Function	-
Sma3	response to osmotic stress	GO:0006970	Biological Process	-
Sma3	response to oxidative stress	GO:0006979	Biological Process	-
Sma3	response to abscisic acid stimulus	GO:0009737	Biological Process	-
Sma3	polysaccharide transport	GO:0015774	Biological Process	-
Sma3	response to cadmium ion	GO:0046686	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Annexin	IPR001464	-	-
Sma3	Annexin, plant	IPR009118	-	-
Sma3		IPR015472	-	-
Sma3	Annexin repeat, conserved site	IPR018252	-	-
Sma3	Annexin repeat	IPR018502	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G35720.1	ANNAT1, OXY5, ATOXY5 annexin 1 chr1:13225304-13226939 FORWARD LENGTH=317	55%
RefSeq	Arabidopsis thaliana	NP_174810.1	annexin D1 [Arabidopsis thaliana]	55%
RefSeq	Populus trichocarpa	XP_002302291.1	predicted protein [Populus trichocarpa]	59%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NNL2

Fln msg:

Fln protein: MSTITVPVPIPTPSEDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEEDLLKRLESELSSDFEKVVFLWVLDPAERDAVISHDAIKKWNAKNISLLEISSARSSAELLMVRQAYHIRYKKSLEEDVAAHISGNFRKLLVALVSSYRYEGPEVDMRLASSEAKKLNESITSRKDNYEELIRIISTRSKAQLNATFNCYKDAYGHHINKALKTQVPEDFQDAVRVLINCICSTEKHFSKVLRLAIGGLRTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLEQAIASDTSGDYREFLLTLIGKDHA*

Protein Length: 318

Fln nts: GTTACAACGAACATATTTTTGTCATGAAACAAATATTGGTTGCTTGTGAGCGTCAAATAGGAGAACCAGCGGCTGTTTTGTTGAGCTACTCGATTTTAGTAAATCAAGAATTCATCAGCTGTAAATTGAGGCGTTTGATTTCAGTTTAAGTTACATTTTGGTAAAGTTGGTCGACCTCCATTGCTGAAGATATTGTGCGAGGTATCGGATTTGTGGAGAAG_-_ATGTCAACAATTACAGTGCCAGTTCCAATACCGACCCCATCTGAAGACTCTGAACGCCTGAGGAAGGCTTTTGAAGGGTGGGGCACAAATGAGAAGTCAATCATACAAATATTAGGACATAGAACTGCAGCACAACGCAAAGTAATCCGTCAAAGTTATTTTCAACTGTACGAAGAGGATCTCTTGAAGCGATTAGAATCTGAGCTTTCAAGTGACTTTGAGAAAGTTGTATTCCTTTGGGTACTAGATCCAGCTGAACGTGATGCGGTCATATCTCATGATGCAATAAAGAAGTGGAATGCAAAGAATATATCGCTTTTAGAAATTTCCAGTGCTCGATCTTCGGCTGAACTATTGATGGTGAGGCAAGCATATCATATTCGGTACAAAAAGTCCCTCGAAGAAGATGTGGCTGCACATATAAGTGGAAACTTCCGTAAGTTGCTGGTAGCACTTGTAAGTTCATATCGGTATGAAGGTCCAGAAGTGGATATGCGTCTTGCAAGTTCTGAAGCAAAGAAGCTAAATGAATCTATAACGAGCAGAAAAGATAATTACGAAGAACTCATTCGAATAATAAGTACAAGGAGCAAAGCTCAATTGAATGCTACATTCAATTGTTACAAGGATGCGTATGGTCATCATATTAACAAGGCCTTGAAGACTCAAGTACCTGAAGATTTCCAAGATGCTGTGCGAGTTTTGATCAATTGTATTTGCTCTACTGAAAAACACTTCTCAAAGGTTTTGCGCTTAGCGATAGGAGGACTCAGGACAGATGAAGATGCACTCACACGGGTTGTTGTAACACGCGCGGAAGTTGACATGAAACATATCAAAGAGGCATATGCTAAGAGGACCAGCAAGACTTTGGAACAGGCAATAGCATCCGACACCTCCGGAGATTATCGGGAATTTTTGCTTACATTGATAGGCAAAGATCATGCTTAA___GCTCATTCATCCCGATGGCCTCTTTTCAAGCATTTATGTCTGGAATTTTAAGCTTTAGAATCTTAATAATTTTAAGCACGCACCGTGTAGACACTTGTTTTTCTTTGGGTTGTTTGAAAGTTGTGTTGACTCACTGGATCATACACCTGTAAGTTTGGACCTTGTTGTTTCTTTGTATACATGCTTACGCAAAATCATTTGTTATTGTTGACTGGATTTTGATTACACCATTTCTTTTCATTGTTCTCCATTGGATCTACGTCATAAATCCGTAGACCTGCTATATAACACTCAACCCATACAACCTATTTTTTGGAAAAATTTACACATGCCATAATTTTTTTTTTGCAGACATGCATTAT

Fln Alignment:

Contig2680___EDSERLRKAFEGWGTNEKSIIQILGHRTAAQRKVIRQSYFQLYEEDLLKRLESELSSDFEKVVFLWVLDPAERDAVISHDAIKKWNAKNISLLEISSARSSAELLMVRQAYHIRYKKSLEEDVAAHISGNFRKLLVALVSSYRYEGPEVDMRLASSEAKKLNESITSRKDNYEELIRIISTRSKAQLNATFNCYKDAYGHHINKALKTQVPEDFQDAVRVLINCICSTEKHFSKVLRLAIGGLRTDEDALTRVVVTRAEVDMKHIKEAYAKRTSKTLEQAIASDTSGDYREFLLTLIGKDHA
A9NNL2______________EDSESLRKAFEGWGTNEKLIIEILGHRTAAQRRAIRQAYTQLYEEDFLKRLQSELTREFERALFLWSLDPPERDALLAHESIKKWSPKNRSLIEISCARSSSELWLVRQAYHVRYKKSLEEDIASHTQGDFRKLLVQLVSSYRYEGPEVDMRLAKSEAKQLHEAIEDKAFGNEEFIRIITTRSKAQLNATFNNYKDEYGHHINKDLKNEKPEEFLESLRVVIKCICFPERYFAKVLRLAIDKLGTEEEALIRVVVTRAETDMNNIKEEYHKRTSKTLEHAIAADTSGYYEEFLLTLIGKEQS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain