SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene2502

Length: 2485 nt

UniGene Fasta

>sp_v3.0_unigene2502
CAGCGACTTTTCTTCAGCCCCAACAACCGATTCTCCTCTTATAAGCACCCAAACGGAGAAGAGGGGAAACATAGATCTTATGGATTTCATTTCAGGGTTTTCAGCTTCATAGTCAGGTGTAATAACAGTTCCCACATTACATTCCTTTTCAGTTTCTGTTGGGCAAAAGTAAAGCAATATTCAGTTGCCTGGTTCTGTTGTTTGTTGTTGGATTTTGTGTTAGAATAATGGCTGAATCAGGCTCTGTTTTCTCGGCTCCCTTGTTGTCGGATGCCTGGAAGCTATCCTGTAGCGTTTACAAAAGTCAACACGTTGATCGCAGCTATGTGAGGTCTGTCATAAGCGGTAAAAAATTAGTTGTGTTCGCTTTCCGTGGCTCTCTGGAACCCAATTCAGCAACTAAATACGGAGAGTGCCAAATTAAGCCTCAGGATGGTTTGCTTGAGGGAATGAAAGATGGAAATGACCAGAGACCCTCCGTCCACCAAGGTGCTCTCAGTCAATTTCAGGATATTTGGAACGGATCAGGCGTCCAAAAACAGGTCAGTGAGGATTATGAGAAGGGGAATACCATTGTGTTTACCGGCCACTCCATGGGAGGGGGTATTGCTGCGTTGGCCACTTTACGGATGTTGGAGATGCAGCCTGGCCTGCCTAAATCGGTATTTTGCATCACGTTTGGGTTCCCTTTGATTGGGGATGAAATTCTGGCGCGAGGAGTTCGTCGCAAGAAGTGGGCGGATCAGTTCTGCCATGTTGTGTTGAGGCGCGATGCCCTCTCTAGGATTCTCTTGGTTCCTTCGATATCTGTTTCTAAGCCCTTAGAAGCTCTGTTACCCTATTGGAACAGATCCATGCAGAGCGCAGCGGATTCAATGGGTTCCACTGATTTACCTATGGCAGAAACCCTCCCAGGGGGCATTCCTGAATTTGTTGCCACTGTAGTCCAGCATTGTTCCGCTGTCTCGAATTATACCAGCGCTGCCAAAATGAGCCCCAACAACCCCTTGATAGCTGCTGTAAAGCCTCTGGTGAAGTTAAGTCCTTATAGGCCATTTGGGTATTATCTATTCTGTTCAAGTAGTGGCGCAATATGGGTAGAAAATCATTATGCTGTGTTACCCATCCTCTATTTCTCCCTACAGACGTTAGGTGCTAACTTAGAGGACTTCATCTTACAGCATGTTGGTTATGGCTATATCTTACCCAATGCCCTGCAAAACATCGTGAAATTCAATGAGCTTTCAGATCTTCCGTTGTCTGACGCAGGATCAGTTCATCAAGACGCAAGGATAAAAACACAATTGGACGCCCTTGGGCTTGGAATTCAGAATTGCCAAGCAAGACTTGCCCTGAGAGCAGCAGGACAAGTTCTGAAGCAGCAGAGTGAGAACCTGGCCATTTTGGAGAAGGAATATCCCAAAAAGATGGAAATCCCCATGGAGAAACTAGCAGAATATCGCCAACTATGTTTGAGAAATGAGACTGGATACTATGATGCTTTTAAAAAGAAGCAACGAGGTAACGTGGACTTCAAGGCTAATCTCAACAGGCTGGAGCTTGCAGGCTGGTGGGACGAGATAATACAGAACAAGTTCGATAAGGACGAATTACCCGATGATTTCCAGTGCAGGCAAGAGTGGATAACACGGGGCACGTACTACAGGCTACTTGTTGAGCCACTGGACATTGCAAATTATTACAGATTGGGCAAAAACGAGGACTCAGGACCGTACCTCACTCATGGAAGGCCTCGTCGTTACAAAACTCTTCAAAAGTGGCTGGAAAATAATGAAGAGCAGCTGCAATCACTCCCAACGAAGCTCACTCAGGACTCTTGCCTCTGGGCTTATGTTGAAGAACTTAAATGTATGCAAAATAGCAAGGATAAAGATGAAAAAGGAATAGATGAAAAAGGAATAGAATTGAAGAAACGAGTAAAGGCTTTGACTGACTCCGATGGTTTGTGCAAGGAAGATCTTATGGCAGCCGAATCCACCTACAACACTGTGGTCAACTGGTCGCCCAGCAACAAGCCTCTGGCTTAGCTCTATAATTTATCATCCCCAGCAAAGCATCCAGATTTGAGTGACGATACATCTGGTTGTAACAAGTCAGGTAGCTTTGGATTAGGTGTTCCGCATTCCGTGCTTCTGTTTCATTTGGATTTAGACTCTACTCAAACTTATGTATGGTTGAACAATGTATTTAACTTAGATATCACTATTTTAATTTAGTTGGTGTGAGGTTTAGTCCTTCGATTCAAATTTGAACAATGTATTTCGCTTTGAAATTACTGTTTTAATTTAGTTGTGTGAGGTTTAGTCCTTGGGTTCAAATTTGAACAATGTATTTCGCTTTGATATCACTTTTGTGTGAGGATTAGTGTTTGACTTCAAACTGCTCAATTAATAGTGATCACATCACAGTGGTCATTTTTCTTTCCAATATCAAAGTTATCCCACACTAAACTCACTCTAATTAT

Ace file of the UniGene sp_v3.0_unigene2502

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	enhanced disease susceptibility 1 protein [Solanum tuberosum]	-	-	0.0	36%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	68%

Source	Gene names
Sma3	EDR1;

Source	GOs	Term	Type	e value	Identity
Sma3	triglyceride lipase activity	GO:0004806	Molecular Function	0.0	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	0.0	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipase, class 3	IPR002921	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: D5A9S3

Fln msg: query STOP codon is far from subject stop. Distance to subject end: 20 aas, your sequence is shorter than subject: 607 - 633

Fln protein: MAESGSVFSAPLLSDAWKLSCSVYKSQHVDRSYVRSVISGKKLVVFAFRGSLEPNSATKYGECQIKPQDGLLEGMKDGNDQRPSVHQGALSQFQDIWNGSGVQKQVSEDYEKGNTIVFTGHSMGGGIAALATLRMLEMQPGLPKSVFCITFGFPLIGDEILARGVRRKKWADQFCHVVLRRDALSRILLVPSISVSKPLEALLPYWNRSMQSAADSMGSTDLPMAETLPGGIPEFVATVVQHCSAVSNYTSAAKMSPNNPLIAAVKPLVKLSPYRPFGYYLFCSSSGAIWVENHYAVLPILYFSLQTLGANLEDFILQHVGYGYILPNALQNIVKFNELSDLPLSDAGSVHQDARIKTQLDALGLGIQNCQARLALRAAGQVLKQQSENLAILEKEYPKKMEIPMEKLAEYRQLCLRNETGYYDAFKKKQRGNVDFKANLNRLELAGWWDEIIQNKFDKDELPDDFQCRQEWITRGTYYRLLVEPLDIANYYRLGKNEDSGPYLTHGRPRRYKTLQKWLENNEEQLQSLPTKLTQDSCLWAYVEELKCMQNSKDKDEKGIDEKGIELKKRVKALTDSDGLCKEDLMAAESTYNTVVNWSPSNKPLA*

Protein Length: 608

Fln nts: CAGCGACTTTTCTTCAGCCCCAACAACCGATTCTCCTCTTATAAGCACCCAAACGGAGAAGAGGGGAAACATAGATCTTATGGATTTCATTTCAGGGTTTTCAGCTTCATAGTCAGGTGTAATAACAGTTCCCACATTACATTCCTTTTCAGTTTCTGTTGGGCAAAAGTAAAGCAATATTCAGTTGCCTGGTTCTGTTGTTTGTTGTTGGATTTTGTGTTAGAATA_-_ATGGCTGAATCAGGCTCTGTTTTCTCGGCTCCCTTGTTGTCGGATGCCTGGAAGCTATCCTGTAGCGTTTACAAAAGTCAACACGTTGATCGCAGCTATGTGAGGTCTGTCATAAGCGGTAAAAAATTAGTTGTGTTCGCTTTCCGTGGCTCTCTGGAACCCAATTCAGCAACTAAATACGGAGAGTGCCAAATTAAGCCTCAGGATGGTTTGCTTGAGGGAATGAAAGATGGAAATGACCAGAGACCCTCCGTCCACCAAGGTGCTCTCAGTCAATTTCAGGATATTTGGAACGGATCAGGCGTCCAAAAACAGGTCAGTGAGGATTATGAGAAGGGGAATACCATTGTGTTTACCGGCCACTCCATGGGAGGGGGTATTGCTGCGTTGGCCACTTTACGGATGTTGGAGATGCAGCCTGGCCTGCCTAAATCGGTATTTTGCATCACGTTTGGGTTCCCTTTGATTGGGGATGAAATTCTGGCGCGAGGAGTTCGTCGCAAGAAGTGGGCGGATCAGTTCTGCCATGTTGTGTTGAGGCGCGATGCCCTCTCTAGGATTCTCTTGGTTCCTTCGATATCTGTTTCTAAGCCCTTAGAAGCTCTGTTACCCTATTGGAACAGATCCATGCAGAGCGCAGCGGATTCAATGGGTTCCACTGATTTACCTATGGCAGAAACCCTCCCAGGGGGCATTCCTGAATTTGTTGCCACTGTAGTCCAGCATTGTTCCGCTGTCTCGAATTATACCAGCGCTGCCAAAATGAGCCCCAACAACCCCTTGATAGCTGCTGTAAAGCCTCTGGTGAAGTTAAGTCCTTATAGGCCATTTGGGTATTATCTATTCTGTTCAAGTAGTGGCGCAATATGGGTAGAAAATCATTATGCTGTGTTACCCATCCTCTATTTCTCCCTACAGACGTTAGGTGCTAACTTAGAGGACTTCATCTTACAGCATGTTGGTTATGGCTATATCTTACCCAATGCCCTGCAAAACATCGTGAAATTCAATGAGCTTTCAGATCTTCCGTTGTCTGACGCAGGATCAGTTCATCAAGACGCAAGGATAAAAACACAATTGGACGCCCTTGGGCTTGGAATTCAGAATTGCCAAGCAAGACTTGCCCTGAGAGCAGCAGGACAAGTTCTGAAGCAGCAGAGTGAGAACCTGGCCATTTTGGAGAAGGAATATCCCAAAAAGATGGAAATCCCCATGGAGAAACTAGCAGAATATCGCCAACTATGTTTGAGAAATGAGACTGGATACTATGATGCTTTTAAAAAGAAGCAACGAGGTAACGTGGACTTCAAGGCTAATCTCAACAGGCTGGAGCTTGCAGGCTGGTGGGACGAGATAATACAGAACAAGTTCGATAAGGACGAATTACCCGATGATTTCCAGTGCAGGCAAGAGTGGATAACACGGGGCACGTACTACAGGCTACTTGTTGAGCCACTGGACATTGCAAATTATTACAGATTGGGCAAAAACGAGGACTCAGGACCGTACCTCACTCATGGAAGGCCTCGTCGTTACAAAACTCTTCAAAAGTGGCTGGAAAATAATGAAGAGCAGCTGCAATCACTCCCAACGAAGCTCACTCAGGACTCTTGCCTCTGGGCTTATGTTGAAGAACTTAAATGTATGCAAAATAGCAAGGATAAAGATGAAAAAGGAATAGATGAAAAAGGAATAGAATTGAAGAAACGAGTAAAGGCTTTGACTGACTCCGATGGTTTGTGCAAGGAAGATCTTATGGCAGCCGAATCCACCTACAACACTGTGGTCAACTGGTCGCCCAGCAACAAGCCTCTGGCTTAG___CTCTATAATTTATCATCCCCAGCAAAGCATCCAGATTTGAGTGACGATACATCTGGTTGTAACAAGTCAGGTAGCTTTGGATTAGGTGTTCCGCATTCCGTGCTTCTGTTTCATTTGGATTTAGACTCTACTCAAACTTATGTATGGTTGAACAATGTATTTAACTTAGATATCACTATTTTAATTTAGTTGGTGTGAGGTTTAGTCCTTCGATTCAAATTTGAACAATGTATTTCGCTTTGAAATTACTGTTTTAATTTAGTTGTGTGAGGTTTAGTCCTTGGGTTCAAATTTGAACAATGTATTTCGCTTTGATATCACTTTTGTGTGAGGATTAGTGTTTGACTTCAAACTGCTCAATTAATAGTGATCACATCACAGTGGTCATTTTTCTTTCCAATATCAAAGTTATCCCACACTAAACTCACTCTAATTAT

Fln Alignment:

Contig2502___RIMAESGSVFSAPLLSDAWKLSCSVYKSQHVDRSYVRSVISGKKLVVFAFRGSLEP----NSATKYGECQIKPQDGLLEGMKDGNDQRPSVHQGALSQFQDIWNGSGVQKQVSEDYEKGNTIVFTGHSMGGGIAALATLRMLE--MQPGLPKSVFCITFGFPLIGDEILARGVRRKKWADQFCHVVLRRDALSRILLVPSISVSKPLEALLPYWNRSMQSAADSMGSTDLPMAETLPGGIPEFVATVVQHCSAVSNYTSAAKMSPNNPLIAAVKPLVKLSPYRPFGYYLFCSSSGAIWVENHYAVLPILYFSLQTLGANLEDFILQHVGYGYILPNALQNIVKFNELSDLPLSDAGSVHQDARIKTQLDALGLGIQNCQARLALRAAGQVLKQQSENLAILEKEYPKKMEIPMEKLAEYRQLCLRNETGYYDAFKKKQRGNVDFKANLNRLELAGWWDEIIQNKFDKDELPDDFQCRQEWITRGTYYRLLVEPLDIANYYRLGKNEDSGPYLTHGRPRRYKTLQKWLENNEE--QLQSLPTKLTQDSCLWAYVEELKCMQNSXXXXXXXXXXXXXXLKKRVKALTDSDGLCKEDLMAAESTYNTVVNW
D5A9S3______________RLMGGSETFYSASLLSAACNLSCSVYIGERDDPSYVRTDIGNT--VVFAFRGSLDPQVVTSATTKYGECHIHDID-CLEWMKDGNNQPASVHKGAFSQFLDIWNNSPLQEEAGLDCERGKTVVFTGHSMGGAIASLATLCMLDKQLQPGKPKSIFCITFGFPLIGDEVVARAVRRKRWADQFCHVVLGRDAFSRILLAPCISVRKPLEALLPYLKRSMQSAGDSMGSTDTPMEEALPEGIAEFVGTVIQHCSAVVNYSSAAKMSPNNPSIAVVKSLVKLSPYRPFGHYVFCSRTGGISIENHFAVLPILYYALQTSDVNSEQFILEHVGYNHILPNALQNIVKLQELSDLPLSDA-----DSRIATQMDPLGLGIQNCQARLSLSAAGQLQKQQRENVSKLEDEYQAKMEIPMNILEDYRSLCIRDGSGYVDAFKKKERRDRDFQANLKRLELAGWWDEIILNKFDKDELPDDFQCSEEWIRRGTQYRLLVEPLDIANYYRLGKNEDSGIY---GRPSRYKTLQKWLEDNEENKQLQPPPAMLTQDSCLWAYVEENACLMDK----NNYSDEKRIELENRVRPLIDSHGLCMEDFMTGESTFKMVVNW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain