SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene2351

Length: 5586 nt

UniGene Fasta

>sp_v3.0_unigene2351
AATACCATTGTCAAAACTCCACCATCTAGGCTTCCTCTTTATATGGAAAAAAAGGGGAGGTTTATAAGAGACCAAAACCCCGATACTCCTCATTAAATTTGTACATGTTAATGGCCGTCTGGTACAATCTTCAAGCATTTCGTCCGCTCTTGCTGGTGCTGCTTCGAGTCTTCGCGGAAGATACATAGATATATATATATATATTCAGATATTCATAGTCGCATATTTTAAGCATACATGTCAGATGGGCTTGCACGTATTTCGGCACCAAGTGTCCGCAATCTTCAATACTTCTAACTATCTACAGCACACTTTCATTCAGCATAGCAGCAGCGGCCATTAGGTTTTCCTGCATAGAGTTTGTGATATCACAGAAGAAAAATAAAAATAAAAAAAGGATAAACACGGCTGCTCTTCTTCTTGTCAGGGTTTCATGTAACGCAGGGTTTGGCGGTACGAGCGTTCAGCAGCCATGGCGGCCCCCGGATTTATCTTTATAACTTACTTTAGCTACGGCTGAAGAAAAAAAAACAAAAGAAAGCAAAGCCCTCGGGATTATTGGCACGTTAGAGTTAAATACAGCAGACGAGGGTTTTGAATTGGGATACCACCGGGCTATAAGTACGGGAGAGAAGAGGTCCAGCGGAAGAGGGTTTTGAATTGGGGTTATTTGGATGGCAGTTGGGGATAGATATAACGGAAGGGGGTTTTTAATATAGTGGAAGTGAGTTTTAAATTGGGTTTATATTGGATGGCACTGGGGGATCTGGTCGTGTTGAATACAATAGGCTGTAATAAGGACGGTAATAATCATAATATGGCGGACGGAAACGGAAGTGTGAATGGTAACGGTATGTCTGGTAATGAGATGCCTGCGCGGCTTTCGATTTCGGATGAAATTGTTAGCAGGAGGGTGCACGGGGATGCTGTTTTCGCTTGTGTAGCTAGTGCGAGTAGTAATACCAGCAGCAGTATAGTTTATTTGCCTCCTAAAGTGTGTTTTCGCGATCTCAGACAGGATGACTTCGAAGCCTCGGCGTCGTCTGGGCCATCTGAGAGCGGGTTGGTATCAAAGTGGCGAATGAAAGACCGGATGAAGACTGGGAGTGTTGCTCTAGTTCTGTGTTTAAACATTGGTGTGGATCCTCCAGACGTTATCAAAATTTCTCCATGTGCTCGGATGGAGTGTTGGATTGATCCATTCTCAATGGCAGCTGGAAAAGCTATCGAGGCAATTGGAAAGGCATTGGAAGGTCAATATACACGCTGGCAACCACGAGCTAGGTACAAGCTTGCAGCTGATCCTCCTGTGGAAGAGGTAAAAAAACTTTGCAATCACTGCCGCAAAAATGCCAAATCAGAGCGGGTGCTGTTTCACTATAATGGGCATGGTGTTCCAAAACCCACAGCTAATGGGGAAATCTGGCTTTTCAACAAGAGTTATACACAATACATTCCATTGTCAATTTATGAACTTGAATCGTGGCTTGGGACACCCTCAATATACGTATTTGATTGCTCTGCTGCAGGCCTGATAGTTAATGCCTTCATAGAGCGCCAAGAATGGGGTTCTGGTGTTTCTTCTGCGACTGCAATGAAGGATTGCATTTTACTTGCTGCTTGTGGAGCAGATGAGATTCTTCCTCAGAGCCCTGAGTTTCCTGCTGACATTTTTACTTCATGTCTCACAACACCTATAAAGATTGCATTACAATGGTTCCGTTCACGCTCTTTGCTTCGAGATTCACTTAATCCTAATCTGATTGATAAGATACCTGGAAGACAAAATGAACGGAAAACACTCTTAGGGGAGTTGAATTGGATATTTACAGCAGTGACTGATACTATTGCATGGAATGTCTTACCTCGTGAACTGTTTCAGAGGTTGTTTCGACAAGATCTTCTAGTTGCCAGTCTCTTCCGAAACTTCCTGCTTGCAGAACGCATCATGCGCACTGCAAACTGTTCTCCCCTTTCTTTTCCACTTTTGCCTCCTACTCATCAACATCCCATGTGGGATGCATGGGATATGGCAGCCGAAATTTGTCTTTCTCAGCTTCCAACTTTGCTTAATGATCCAAATGTTGAGTTTCAACCAAGTCCTTTCTTCACAGAACAGTTAACGGCCTTTGAAGTGTGGCTGGAACATGGATCTGAACGGAAAAAGCCTCCAGAGCAACTTCCTATTGTTCTTCAGGTATTACTTAGTCAATCTCACAGATATCGGGCTTTGTTTCTGCTGGGAAGATTTCTAGACATGGGAGCCTGGGCAGTGGATCTGGCTTTATCTGTTGGGATTTTCCCATATGTCCTCAAATTACTTCAAACAACTGCGGCAGAGCTGCGACAAGTTCTTGTGTTTATCTGGACTAAGATTCTTGCTCTGGACAAGTCATGCCAAGTTGATTTGGTAAAGGATGGTGGTCATCAATACTTCATTAGATACCTCGATAACATAATGATAGGGGGACATCAGCGTGCTATGGCAGCTTTTGTGTTGGCTGTTATTGTGGATGGGCACCGTCGAGGGCAAGAAGCATGTATTCAATCTGGATTAATTAGTGTCTGCTTGCAGCATATGCAAGCTGGGCTTCCAAGGGAAGTACAGCCAGAGCCTCAGCTGAGGCCTTCAAGGGAGGTACAGCCAGAGTCTCAGCTTGGGCCTTCGAGGGAGGTAGAGTCAGATCCTCAGCCTGGGCCTCAAAGGGAGCCACAGCTTTTGCAGTGGCTTTGTTTGTGCCTTGGAAAACTGTGGGAGGGTTTTCCAGAAGCTCAACTACAAGGCCTACGTGAAAATGCTTCATCTATATGTTCCCCTCTTCTATATGAACCTCAACCAGAGGTAAGAGCGGCTGCGGTCTTTGCATTAGGAACTCTTCTATCTCTTGGAACTGAATCCTTAAGGGATGGCCCCGTATATGATGACTATGATGATGATGATGAAAAAAGTAAAGCAGAGCAAGAAATTGCAAAACATCTCCTCAAAGTACTTTCTGATGCAAGTCCACTTGTCCGGGCTGAGCTTGCAGTAGCCCTATCACGCTTTGCTGTTGGACATAACAAGCATCTGAAGTCAATGGCTGCTGCATATTTGAAGCCACCATCCAATTCCACTTTGAATTCTTTACCATCATTGGCAAACATTAGAAGTCCAAATAGCAGTTATACAAATGCAAGCCAATTTATGTTATCCTCTAATGCAATTTCTGCTAATCATGGTCCGGTTTTAAGAGTAGGAAGTGACAACAATGCTTCAACTCGTGAGGGAAGAGTATCTACTAGCAGCCCACTGGCTTCAACTAGTATTATGCATGGCTCTCCTTCATCTGATGGTTCATCCCAGAAGTCAGAGTCTAGGATGTCATTGCCTGATGCTGCCAGTAATGGGAATTTGAGATTACCAAGATCCAAATCGATGGATAATGCAGTATATGCACAATGTGTTGCTGCCATGTATGCTTTGGCAAGGGATCCAGCACCATGGGTTGCAAGTTTGGGACGACAAATACTAGGAACAATTGGTGTTGAGCCAGTTGTAGCAAAGTCAGCCAGGCCTACAGGTGGGGCTGGACAGCACCGGGATTCTTCTGTTGCATCTGTTCCTCCTAGTTTACCTGGATTGGCACGTTCATATTCTTGGTTAGATTTAAATTCAGGAAATCTACCTATTACATTTAGAACGCCTCCTGCAAGTCCCCCAACCCGACAGAGCTACTTAACTGGAATGCGTAGAGTATGCTCCTTGGAATTCGGTCCTCACATGCGCACAGCTGCAGATGCTGGTTTAGCAGACTCAATCATAGTCCCTGGTGGATCATCAGCCTCTGAAAGGGGCCTCCTTCCACAATCAACTATCTATAGTTGGAGTTGTGGCCATTACTCAAGGCCTCTGTTGGCAACTTCTGATGATGAGGAAGCATTAGTAAGACGGGAAGAAAGAGAGAGGCTAACTCTTGAAAGAATTGCAAAATGTCAACACTCTAATGTAAGCAGAATCAGTGATCAGATTGCAAAATTTCCGGAAACAGGTTGTGAGGCTGGGCTGAAATCTGTATTGCTACATCCTTTCATTCCTATTGTTATTGCTGCTGACGAGAAGGAGACTGTAAGGATATGGAACTATGATGAAGAAACACAGCTGAATGTTTTTGACAACCACGATGGCCCGAACAGGGGAATTTCCAAGCTCTGTCTTGTGAATGAGCTGGATGACAGCATGCTTCTTGTTGCTTCAAATGATGGGAGTGTTCGTGTTTGGAAAGATTACACTCAACGAGATAAACATAAGCTTGCAACAGCGTGGCAAACAACTCAAGGGCATAGACCTGGTGCTCGCAGTGTTAATGCTGTGGTTGACTGGCAGCAGTTGACAGGGTTTCTGTATGCATCCGGGGAGATATCCTCTATCATGGTTTGGGATCTTCGTATAGAACAACTAGCTTGCAGTATCCCATCTTCTACAGAAAGCTGCATTTCAGCCCTGTCTGCATCTCAGGTTCATGATCGACAGCTAGTTGCAGGTTCTGGAGATGGATCTGTCAGACTCTATGATATCAGAGCTAAGGAAATGATTGTTTGTACAGCAAGGCCTCATGGTCATAGAATAGTAGGAATTGATTTTCAACCAGGCTTGGATCCAGCAAAGATAGTGAGTGCTTCTCAAGCCGGGGATATCCAGTTTCTAGACATAAGGAACAGCAACAGGCCTTATTTGTCCATTGATGCTCACAGGGGCTCGCTTACTGCTTTGGCTGTTCATAGACATGCTCCAGTGATTGCGAGTGGTTCTGCAAAGCAGTACATTAAGGTGTTTAGTATAACTGGTGAGCAGTTAAATATGGTTCGCTATCACAACAGCTTTATGGGGCAAAGAATAGGACCTGTGAGTTGCCTATCTTTTCATCCATACAATATACAGCTTGCTGCGGGAGCAACAGATGGTTTTGTGTCCATTTACTCTGGAGAAAATTTACAGGCGAGATAGTACTGAAAAGGCAGTCTTTGTTCCCCAGCCCTGTTAAATTATCGTGGCCTGTGTAACAAGAGGGAAGTTGTAATTGTGTCTTTGGTGGTGTTGTCCTGGCTACAAAAATTCTTTACAAATAAGTTTTAGATGGGTAAGGTTCTTGTTACACAACATTGTTGACCCATCATCTTCTCTTGTCCTCGCATTGGAATAACTTCCTTCAGAGGTTTAAGAGGATTGGGCTTTTGTCAAATATGTATATTTATATTCATTGTTCTTTTGGCAAGAGGTGATTCAAGGTTTCGTGCCTCTCATGGAGCATGTCTTTGTTTAGTTTGGGCCGTTTACAGAATAATGTGTGCGAAAGTGACAAAGCATGTAAATATCTCTTGTTTCATTTTGTATAACATTTCCAGCGAAGTGGTTTGCAACCTATGGTGTCATATGTTTATAGCATTTATTGTATTTAAAGTGATCAGGAATGTAGTGTCAACTCCTTTAAGTCACTGTCTCATAAAATCAGTAGGGCAATCTAGTTCTATTCTGACTATGTTGTATTCTTTTCTTGAACAGGCCTGCCAAATTGTAAGAATTGAAGGGTTGTTGCATTGATTTTTTGC

Ace file of the UniGene sp_v3.0_unigene2351

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	regulatory associated protein of mTOR [Arabidopsis thaliana] sp\|Q93YQ1.1\|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb\|AAL24320.1\| Unknown protein [Ar	-	-	0.0	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	23%
Sma3	Chromosome chr8 scaffold_88, whole genome shotgun sequence	-	-	7.001e-10	-

Source	Gene names
Sma3	At3g08850; At5g01770; CHLREDRAFT_107651; GSVIVT00037444001; GSVIVT00037445001; GSVIVT00037446001; GSVIVT00037449001; MICPUCDRAFT_17707; MICPUN_80694; Os05g0307400; Os12g0110000; OsI_19399; OsI_37190; OsI_37196; OsJ_17994; OsJ_32676; OsJ_34970; Ot06g01080;

Source	GOs	Term	Type	Identity
Sma3	intracellular	GO:0005622	Cellular Component	-
Sma3	double-stranded RNA binding	GO:0003725	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	embryo development ending in seed dormancy	GO:0009793	Biological Process	-
Sma3	cell growth	GO:0016049	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	HEAT	IPR000357	-	-
Sma3	Double-stranded RNA-binding	IPR001159	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	Pentatricopeptide repeat	IPR002885	-	-
Sma3	Regulatory associated protein of TOR	IPR004083	-	-
Sma3	Aminotransferases, class-I, pyridoxal-phosphate-binding site	IPR004838	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Double-stranded RNA-binding-like	IPR014720	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G08850.1	" RAPTOR1B, ATRAPTOR1B, RAPTOR1 HEAT repeat ;WD domain, G-beta repeat protein protein chr3:2686978-2694911 REVERSE LENGTH=1344"	65%
RefSeq	Arabidopsis thaliana	NP_566335.1	regulatory associated protein of mTOR [Arabidopsis thaliana]	65%
RefSeq	Populus trichocarpa	XP_002309174.1	predicted protein [Populus trichocarpa]	66%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LQY8

Fln msg: your sequence is longer than subject: 1411 - 326

Fln protein: MALGDLVVLNTIGCNKDGNNHNMADGNGSVNGNGMSGNEMPARLSISDEIVSRRVHGDAVFACVASASSNTSSSIVYLPPKVCFRDLRQDDFEASASSGPSESGLVSKWRMKDRMKTGSVALVLCLNIGVDPPDVIKISPCARMECWIDPFSMAAGKAIEAIGKALEGQYTRWQPRARYKLAADPPVEEVKKLCNHCRKNAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYIPLSIYELESWLGTPSIYVFDCSAAGLIVNAFIERQEWGSGVSSATAMKDCILLAACGADEILPQSPEFPADIFTSCLTTPIKIALQWFRSRSLLRDSLNPNLIDKIPGRQNERKTLLGELNWIFTAVTDTIAWNVLPRELFQRLFRQDLLVASLFRNFLLAERIMRTANCSPLSFPLLPPTHQHPMWDAWDMAAEICLSQLPTLLNDPNVEFQPSPFFTEQLTAFEVWLEHGSERKKPPEQLPIVLQVLLSQSHRYRALFLLGRFLDMGAWAVDLALSVGIFPYVLKLLQTTAAELRQVLVFIWTKILALDKSCQVDLVKDGGHQYFIRYLDNIMIGGHQRAMAAFVLAVIVDGHRRGQEACIQSGLISVCLQHMQAGLPREVQPEPQLRPSREVQPESQLGPSREVESDPQPGPQREPQLLQWLCLCLGKLWEGFPEAQLQGLRENASSICSPLLYEPQPEVRAAAVFALGTLLSLGTESLRDGPVYDDYDDDDEKSKAEQEIAKHLLKVLSDASPLVRAELAVALSRFAVGHNKHLKSMAAAYLKPPSNSTLNSLPSLANIRSPNSSYTNASQFMLSSNAISANHGPVLRVGSDNNASTREGRVSTSSPLASTSIMHGSPSSDGSSQKSESRMSLPDAASNGNLRLPRSKSMDNAVYAQCVAAMYALARDPAPWVASLGRQILGTIGVEPVVAKSARPTGGAGQHRDSSVASVPPSLPGLARSYSWLDLNSGNLPITFRTPPASPPTRQSYLTGMRRVCSLEFGPHMRTAADAGLADSIIVPGGSSASERGLLPQSTIYSWSCGHYSRPLLATSDDEEALVRREERERLTLERIAKCQHSNVSRISDQIAKFPETGCEAGLKSVLLHPFIPIVIAADEKETVRIWNYDEETQLNVFDNHDGPNRGISKLCLVNELDDSMLLVASNDGSVRVWKDYTQRDKHKLATAWQTTQGHRPGARSVNAVVDWQQLTGFLYASGEISSIMVWDLRIEQLACSIPSSTESCISALSASQVHDRQLVAGSGDGSVRLYDIRAKEMIVCTARPHGHRIVGIDFQPGLDPAKIVSASQAGDIQFLDIRNSNRPYLSIDAHRGSLTALAVHRHAPVIASGSAKQYIKVFSITGEQLNMVRYHNSFMGQRIGPVSCLSFHPYNIQLAAGATDGFVSIYSGENLQAR*

Protein Length: 1412

Fln nts: AATACCATTGTCAAAACTCCACCATCTAGGCTTCCTCTTTATATGGAAAAAAAGGGGAGGTTTATAAGAGACCAAAACCCCGATACTCCTCATTAAATTTGTACATGTTAATGGCCGTCTGGTACAATCTTCAAGCATTTCGTCCGCTCTTGCTGGTGCTGCTTCGAGTCTTCGCGGAAGATACATAGATATATATATATATATTCAGATATTCATAGTCGCATATTTTAAGCATACATGTCAGATGGGCTTGCACGTATTTCGGCACCAAGTGTCCGCAATCTTCAATACTTCTAACTATCTACAGCACACTTTCATTCAGCATAGCAGCAGCGGCCATTAGGTTTTCCTGCATAGAGTTTGTGATATCACAGAAGAAAAATAAAAATAAAAAAAGGATAAACACGGCTGCTCTTCTTCTTGTCAGGGTTTCATGTAACGCAGGGTTTGGCGGTACGAGCGTTCAGCAGCCATGGCGGCCCCCGGATTTATCTTTATAACTTACTTTAGCTACGGCTGAAGAAAAAAAAACAAAAGAAAGCAAAGCCCTCGGGATTATTGGCACGTTAGAGTTAAATACAGCAGACGAGGGTTTTGAATTGGGATACCACCGGGCTATAAGTACGGGAGAGAAGAGGTCCAGCGGAAGAGGGTTTTGAATTGGGGTTATTTGGATGGCAGTTGGGGATAGATATAACGGAAGGGGGTTTTTAATATAGTGGAAGTGAGTTTTAAATTGGGTTTATATTGG_-_ATGGCACTGGGGGATCTGGTCGTGTTGAATACAATAGGCTGTAATAAGGACGGTAATAATCATAATATGGCGGACGGAAACGGAAGTGTGAATGGTAACGGTATGTCTGGTAATGAGATGCCTGCGCGGCTTTCGATTTCGGATGAAATTGTTAGCAGGAGGGTGCACGGGGATGCTGTTTTCGCTTGTGTAGCTAGTGCGAGTAGTAATACCAGCAGCAGTATAGTTTATTTGCCTCCTAAAGTGTGTTTTCGCGATCTCAGACAGGATGACTTCGAAGCCTCGGCGTCGTCTGGGCCATCTGAGAGCGGGTTGGTATCAAAGTGGCGAATGAAAGACCGGATGAAGACTGGGAGTGTTGCTCTAGTTCTGTGTTTAAACATTGGTGTGGATCCTCCAGACGTTATCAAAATTTCTCCATGTGCTCGGATGGAGTGTTGGATTGATCCATTCTCAATGGCAGCTGGAAAAGCTATCGAGGCAATTGGAAAGGCATTGGAAGGTCAATATACACGCTGGCAACCACGAGCTAGGTACAAGCTTGCAGCTGATCCTCCTGTGGAAGAGGTAAAAAAACTTTGCAATCACTGCCGCAAAAATGCCAAATCAGAGCGGGTGCTGTTTCACTATAATGGGCATGGTGTTCCAAAACCCACAGCTAATGGGGAAATCTGGCTTTTCAACAAGAGTTATACACAATACATTCCATTGTCAATTTATGAACTTGAATCGTGGCTTGGGACACCCTCAATATACGTATTTGATTGCTCTGCTGCAGGCCTGATAGTTAATGCCTTCATAGAGCGCCAAGAATGGGGTTCTGGTGTTTCTTCTGCGACTGCAATGAAGGATTGCATTTTACTTGCTGCTTGTGGAGCAGATGAGATTCTTCCTCAGAGCCCTGAGTTTCCTGCTGACATTTTTACTTCATGTCTCACAACACCTATAAAGATTGCATTACAATGGTTCCGTTCACGCTCTTTGCTTCGAGATTCACTTAATCCTAATCTGATTGATAAGATACCTGGAAGACAAAATGAACGGAAAACACTCTTAGGGGAGTTGAATTGGATATTTACAGCAGTGACTGATACTATTGCATGGAATGTCTTACCTCGTGAACTGTTTCAGAGGTTGTTTCGACAAGATCTTCTAGTTGCCAGTCTCTTCCGAAACTTCCTGCTTGCAGAACGCATCATGCGCACTGCAAACTGTTCTCCCCTTTCTTTTCCACTTTTGCCTCCTACTCATCAACATCCCATGTGGGATGCATGGGATATGGCAGCCGAAATTTGTCTTTCTCAGCTTCCAACTTTGCTTAATGATCCAAATGTTGAGTTTCAACCAAGTCCTTTCTTCACAGAACAGTTAACGGCCTTTGAAGTGTGGCTGGAACATGGATCTGAACGGAAAAAGCCTCCAGAGCAACTTCCTATTGTTCTTCAGGTATTACTTAGTCAATCTCACAGATATCGGGCTTTGTTTCTGCTGGGAAGATTTCTAGACATGGGAGCCTGGGCAGTGGATCTGGCTTTATCTGTTGGGATTTTCCCATATGTCCTCAAATTACTTCAAACAACTGCGGCAGAGCTGCGACAAGTTCTTGTGTTTATCTGGACTAAGATTCTTGCTCTGGACAAGTCATGCCAAGTTGATTTGGTAAAGGATGGTGGTCATCAATACTTCATTAGATACCTCGATAACATAATGATAGGGGGACATCAGCGTGCTATGGCAGCTTTTGTGTTGGCTGTTATTGTGGATGGGCACCGTCGAGGGCAAGAAGCATGTATTCAATCTGGATTAATTAGTGTCTGCTTGCAGCATATGCAAGCTGGGCTTCCAAGGGAAGTACAGCCAGAGCCTCAGCTGAGGCCTTCAAGGGAGGTACAGCCAGAGTCTCAGCTTGGGCCTTCGAGGGAGGTAGAGTCAGATCCTCAGCCTGGGCCTCAAAGGGAGCCACAGCTTTTGCAGTGGCTTTGTTTGTGCCTTGGAAAACTGTGGGAGGGTTTTCCAGAAGCTCAACTACAAGGCCTACGTGAAAATGCTTCATCTATATGTTCCCCTCTTCTATATGAACCTCAACCAGAGGTAAGAGCGGCTGCGGTCTTTGCATTAGGAACTCTTCTATCTCTTGGAACTGAATCCTTAAGGGATGGCCCCGTATATGATGACTATGATGATGATGATGAAAAAAGTAAAGCAGAGCAAGAAATTGCAAAACATCTCCTCAAAGTACTTTCTGATGCAAGTCCACTTGTCCGGGCTGAGCTTGCAGTAGCCCTATCACGCTTTGCTGTTGGACATAACAAGCATCTGAAGTCAATGGCTGCTGCATATTTGAAGCCACCATCCAATTCCACTTTGAATTCTTTACCATCATTGGCAAACATTAGAAGTCCAAATAGCAGTTATACAAATGCAAGCCAATTTATGTTATCCTCTAATGCAATTTCTGCTAATCATGGTCCGGTTTTAAGAGTAGGAAGTGACAACAATGCTTCAACTCGTGAGGGAAGAGTATCTACTAGCAGCCCACTGGCTTCAACTAGTATTATGCATGGCTCTCCTTCATCTGATGGTTCATCCCAGAAGTCAGAGTCTAGGATGTCATTGCCTGATGCTGCCAGTAATGGGAATTTGAGATTACCAAGATCCAAATCGATGGATAATGCAGTATATGCACAATGTGTTGCTGCCATGTATGCTTTGGCAAGGGATCCAGCACCATGGGTTGCAAGTTTGGGACGACAAATACTAGGAACAATTGGTGTTGAGCCAGTTGTAGCAAAGTCAGCCAGGCCTACAGGTGGGGCTGGACAGCACCGGGATTCTTCTGTTGCATCTGTTCCTCCTAGTTTACCTGGATTGGCACGTTCATATTCTTGGTTAGATTTAAATTCAGGAAATCTACCTATTACATTTAGAACGCCTCCTGCAAGTCCCCCAACCCGACAGAGCTACTTAACTGGAATGCGTAGAGTATGCTCCTTGGAATTCGGTCCTCACATGCGCACAGCTGCAGATGCTGGTTTAGCAGACTCAATCATAGTCCCTGGTGGATCATCAGCCTCTGAAAGGGGCCTCCTTCCACAATCAACTATCTATAGTTGGAGTTGTGGCCATTACTCAAGGCCTCTGTTGGCAACTTCTGATGATGAGGAAGCATTAGTAAGACGGGAAGAAAGAGAGAGGCTAACTCTTGAAAGAATTGCAAAATGTCAACACTCTAATGTAAGCAGAATCAGTGATCAGATTGCAAAATTTCCGGAAACAGGTTGTGAGGCTGGGCTGAAATCTGTATTGCTACATCCTTTCATTCCTATTGTTATTGCTGCTGACGAGAAGGAGACTGTAAGGATATGGAACTATGATGAAGAAACACAGCTGAATGTTTTTGACAACCACGATGGCCCGAACAGGGGAATTTCCAAGCTCTGTCTTGTGAATGAGCTGGATGACAGCATGCTTCTTGTTGCTTCAAATGATGGGAGTGTTCGTGTTTGGAAAGATTACACTCAACGAGATAAACATAAGCTTGCAACAGCGTGGCAAACAACTCAAGGGCATAGACCTGGTGCTCGCAGTGTTAATGCTGTGGTTGACTGGCAGCAGTTGACAGGGTTTCTGTATGCATCCGGGGAGATATCCTCTATCATGGTTTGGGATCTTCGTATAGAACAACTAGCTTGCAGTATCCCATCTTCTACAGAAAGCTGCATTTCAGCCCTGTCTGCATCTCAGGTTCATGATCGACAGCTAGTTGCAGGTTCTGGAGATGGATCTGTCAGACTCTATGATATCAGAGCTAAGGAAATGATTGTTTGTACAGCAAGGCCTCATGGTCATAGAATAGTAGGAATTGATTTTCAACCAGGCTTGGATCCAGCAAAGATAGTGAGTGCTTCTCAAGCCGGGGATATCCAGTTTCTAGACATAAGGAACAGCAACAGGCCTTATTTGTCCATTGATGCTCACAGGGGCTCGCTTACTGCTTTGGCTGTTCATAGACATGCTCCAGTGATTGCGAGTGGTTCTGCAAAGCAGTACATTAAGGTGTTTAGTATAACTGGTGAGCAGTTAAATATGGTTCGCTATCACAACAGCTTTATGGGGCAAAGAATAGGACCTGTGAGTTGCCTATCTTTTCATCCATACAATATACAGCTTGCTGCGGGAGCAACAGATGGTTTTGTGTCCATTTACTCTGGAGAAAATTTACAGGCGAGATAG___TACTGAAAAGGCAGTCTTTGTTCCCCAGCCCTGTTAAATTATCGTGGCCTGTGTAACAAGAGGGAAGTTGTAATTGTGTCTTTGGTGGTGTTGTCCTGGCTACAAAAATTCTTTACAAATAAGTTTTAGATGGGTAAGGTTCTTGTTACACAACATTGTTGACCCATCATCTTCTCTTGTCCTCGCATTGGAATAACTTCCTTCAGAGGTTTAAGAGGATTGGGCTTTTGTCAAATATGTATATTTATATTCATTGTTCTTTTGGCAAGAGGTGATTCAAGGTTTCGTGCCTCTCATGGAGCATGTCTTTGTTTAGTTTGGGCCGTTTACAGAATAATGTGTGCGAAAGTGACAAAGCATGTAAATATCTCTTGTTTCATTTTGTATAACATTTCCAGCGAAGTGGTTTGCAACCTATGGTGTCATATGTTTATAGCATTTATTGTATTTAAAGTGATCAGGAATGTAGTGTCAACTCCTTTAAGTCACTGTCTCATAAAATCAGTAGGGCAATCTAGTTCTATTCTGACTATGTTGTATTCTTTTCTTGAACAGGCCTGCCAAATTGTAAGAATTGAAGGGTTGTTGCATTGATTTTTTGC

Fln Alignment:

Contig2351___VIAADEKETVRIWNYDEETQLNVFDNHDGPNRGIS-----KLCLVNELDDSMLLVASNDGSVRVWKDYTQRDKHKLATAWQTTQGHRPGARS-VNAVVDWQQLTGFLYASGEISSIMVWDLRIEQLACSIPSST--ESCISALSASQVHDRQLVAGSGDGSVRLYDIRAKEMI--VCTARPHGHRIVGIDFQPGLDPAKIVSASQAGDIQFLDIRNSNRPYLSIDAHRGSLTALAVHRHAPVIASGSAKQYIKVFSITGEQLNMVRYHNSFMGQRIGPVSCLSFHPYNIQLAAGATDGFVSIYSGEN
B8LQY8______________LITSSADQTVKLWNVETGTQLFSF-NFESPARAVDLAEGDKLVVITT--DPFMELPSAIHIKRIEKDLSKQSADSILTI--------TGIKGRINRAV-WGPLNRTIISGGEDAVVRIWDSETGKLLRESEKETGHQKPITSLFKS-ADGSHFLTGSLDKSAKLWDIRTLTLIKTYVTERP----VNAVAISPLLDHVVIGGGQEASHVTTTDRR------------AGKFEAKFFHK------------------ILEEEIGGVKGH-------FGPINALAFNPDGRSFASGGEDGYVRLHHFDN

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
2160		83		16	0.994512
2162			83	16	0.994512
2474	71	28			1.0
2476		71		28	1.0
2477	71		28		1.0
2483		71		28	1.0
2484		28		71	1.0
2486		28		71	1.0
2487			71	28	1.0
2488		28	71		1.0
2489	28	71			1.0
2672	20		80		0.995493
4768	90		10		0.90298
4851			10	90	0.90298
4922	13		86		1.0
5090	88		11		0.923564
5207	90	10			0.90298
5209			10	90	0.90298
5210			90	10	0.90298
5211		10	90		0.90298
5212	10		90		0.90298
5215	12			87	0.992554
5390	28		71		1.0

SSRs (tot: 2)

Start position	End position	Sequence	Length
189	204	AT AT AT AT AT AT AT AT	16
2928	2943	ATG ATG ATG ATG ATG A	16

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain