SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene2063

Length: 5319 nt

UniGene Fasta

>sp_v3.0_unigene2063
TGAGGGTGAAGAGGAAGATGAAGATGAAGATGAGGATGAAGAGGACGACATAGAGGGAGAAGAAGATGGTCCTGCCCACATGTCATTAGCTGATACTGATGTTGACGATCATGAAGATAATGGTCTTGGTGATGAGTATGGAGACGACATGGTAGAGGAGGATGATGATGACGAGTTTCCTGAAAATCGTGTTATTGAAGTAAGGTGGAGAGAAGGCTTGGATGGACTGAATCCTGTACAGGTTTTGGGACATGCTGGAGGAGGTGGTAATTTGGTTGATCTTTCAGCAGAGCCTTTTCAGGGAATTAATATGGATGATATATTTGGCATTCGGCGGCCTGTAGGGGTTGACAGACGTCGTCCGAATGGCCATAGACCTTTTCTGGAACGTTCTGCAGTGGATCGTGGAGGTGCCTTTCAACACCCTCTTCTTACCAGGCCTGCACAGCCTGGTGGAGTAGCTGCAAATGGTTCTGTGTGGCCTTCTACTGGGAGCATTTCTAGAGATGCAGCAGCAATAACAGGAGGGTTTGATGTTGCCCATTTTTTCATTGATGCTCCAATGTTGGCCCCAGAACACCCAGGGGGTACATTCTTTGGGGATCGAGGAGTTGGTGGGCCACCGCCTCTGCTTGATTTCTCCATGGATCCTATATTTTTTACTGGAAGGCGTGGTCCAGGTAATGGCAGATGGACTGATGATGGTCAACCACAGGCAGGTGCTCAAGCTGCAGCCATTGCTCAAGCAGTTGAAGAGGAGTTTCTTTCACTATTGCGGAGCCTTACTCGAGTAGATGAGTGCACTTCAACTCAAGGTGTTGTTCCCAGTGCAGATGACGGTGATGGAGGGCAACAGAATATGGGAGGAGTAATGGACACTGATGCTCAGACCAGTTTCACAGTGAACAATGTAAGTGTACAACAAAATGGAGAACAACAAATGAACGAGGTTGAACCATCACAGCTGGAGCAGAATGCTAATGTGGAACATGGTGAACAAAGAGAATCAGAATTTGCTACGTTAACGAATATAGAAGACCCTGATGTAATGATGAGAGATGAGGGGAATGAAACTAGAAATAGGGATATAGAATCTGAAAGTCAAGATAGTGAGGGAAGTGGTGCAACTATGGGTGAAAGCCTCCGCAGCCTGGAAGTTGAAACTGGAAGCGCAGACGGACACGAGGAAAATGAGAGGCAGGCTGGCCGACAGGCACCAGTTGCTTCTACTTTCGGTGTTTCGGATACAGCAGCTGGTGGCTTGAATTCAGGAAACATTAATAATGAACCTGGAGGTGCATGCTCTGTTAGTCAAGTAGCGGACACAGATGCTGGCCAAAATCCTACACCGGATGAAGCATCTGTGCAATTGCAGGTTCAAGATGAGGTTGTTCAAGCTGCAGACAATGAATTAGCTGAGCAAAGCAATGAAGAATCTAGAGCAAACACTATTGATCCTACATTTTTGGAAGCACTTCCAGAGGACCTTCGTGCGGAAGTTCTAGCTTCTCAGCAAGTGCAATCTACACGACCTGCAAATTATGCACCCCCTCCTGCAGAAGAAATTGATCCAGAGTTTCTTGCGGCACTTCCTCCAGATATCCAAGCTGAAGTTTTAGCTCAGCAACGTGCTCAAAGGGTTGTACAAACCCAGCAAGCTGAAGGCCAGCCTGTTGATATGGATAGTGCTTCAATTATTGCTACTTTCCCTGTTGAGCTGCGTGAAGAGGTTCTTCTGACTTCCTCGGAAGCAGTTCTTGCTGCTTTGTCTCCAGCATTGCTGGCAGAAGCACAAATGCTGAGAGAAAGAGCAATGAATGAGTATCAGGCTCGTAGCTTGTTTGGAGGAGGCCATAGGCTAGGTGGCAGACGCCACAATATGTCAACTGGAGGTCAAACTGCAATGGACCGAGGTGTAGGCAGTAATGTTGGCCTTACATTGGGGCGCAGGCCAGTTGCATCCCTTGGTAATTCCATAAAGATGAAAGAAGTTGAAGGCAAACCTCTAGTAGATACAGGGTCTCTGAAAGCTATGCTTAAGCTACTGAGGTTAGCTCAGCCTTTGGGCAAAGGGTTGCTGCAAAGACTTCTATTAAACCTGTGCGCACATAGTGCTACAAGGGAAATATTAGTTCATCTACTGTTAGACATGCTGAGACCAGAGGCAGAAGGCTTATCAGCAGACACAAATGATGCTCCATCTCAGAGACTTTATGGGTGCCAATGGAATGTGGTTTATGCACGTTCTCAAATCTCAGATGGTGTACCACCTCTTGTTTCTCGTCGTGTCCTTGAGATTTTGACATACCTCGCTAAAAATCATTTCTGCGTTGCTGATCTTCTTTTCTACATGGAGTCGTCTCCAATGTTGGAGTCAACATCTCAAACATCTACAATATCAATCGAAGAGAAAGGCAAGGGAAAGGTTGTTGATGAAGCAGTTCCATATGTAAATGCATCGAGTGTGGGTGAAAAGGGGAAGACACCTCTTATGTTACTTTTAAAGCTCCTTAATCAACCATTATTCTCAAGGAGCAGTGCTCATTTGGAGCAGGTTATGGGGCTGCTTGAGGTTATTATGAACAATGTTGAAGTTAAAAGTGTATTAGAAGCTCCCTCTGGTCAACCAAAGGATGTTTTGCCACAAGGGGAAGGTGTTCAAGCTGGAGTTGAAGCCCAACCTGAGACTGGACCCCATGCCATTTCTACGGACCATGCTGTTGAACCTACTTCTGTTGAAGTTAATGCTGATTCTGAGGTACCCAGGAGCTCAGTAGCAGGTAAAAATAGTGAAAGCATGGAAGCTTCAACTTCAGGTTCGAAGATGGAAATGGTTGCATCTGAGATTCTTCTCCAACTTCCTGAGAGAGAGTTGCAAAACCTGTGTAAACTTCTAGCAAAGGAAGGGTTGTCAGATACAGTATACACAAAGGTGGCAGAGGTTCTGAAGAAGTTAGCTAGTATTGCACCTGCTCATCGAAAGCTTTTCATTTCTGAACTGGCAGACTCTGCCCGTAGCCTAAGTGGTGCTGCAGTTGATGAGCTTGTCACTCTCAGTGAGATGGAGTCATTAGGAGTAAGTACTGGTTCGATGGCAGGAGCAGCTATTTTGAGAGTTCTACAAGCATTGAGTACGTTAACATCAGATACTGGTGCTGGGGCCACTGATGACAAGGAAAATGAAAGTCTTTTGATTGTTGGGGAACTAAATGCAGCACTTGATCCATTATGGCAAGGATTGAGTAGTTGTATAAGTGAAATTGAGCTGCGATTGGGAAATATTTCTGATTTCTCTTCTGCATCAAGTAGGAATGCAGCAGCGACTAACATGGCACCACCTCTTCCACCTGGTACCCAAAGGGTTTTGCCATTTATTGAGGCATTTTTTGTTTTATGTGAGAAGTTGCAGCTAGGACCCACTGCTGTGCAACATGATCCTGATGATGCCAGTGTGAGTGATGTTACACAACAAAGAAGAGCAGAGGCAGGTATGACATTTGTAAAGTTTGCGGAAAAACATCGACGGCTTCTGAATGCTTTTGTCCGGCAGAATCCGGGGTTATTAGAGAAGTCTCTTTCTCTTATGCACAAGACACCTCGTCTAATTGACTTTGACAACAAGCGATCATTTTTCCGCTCTCGGATTAGACAACAGAATGAGCAGCACAACTATAATCCACTCCGTATTTGTGTTCGCCGAACATATGTCTTAGAAGATTCTTACAATCAATTACGGATGCGTTCTGTAGATGACATTAAAGGGCGCTTGACTGTGCAATTTCAAGGAGAGGAGGGCATTGATGCTGGTGGTTTAACAAGAGAATGGTACCAACTATTGTCCAGGGTGATATTTGACAAGGGTGCATTGCTATTCACAACTGTCGGGAATCAGTCAACATTTCAGCCTAATCCAAATTCTGTTCTTCAAACAGAACACCTCTCATACTTCAAGTTTGTTGGGCGGGTGGTTGCTAAAGCATTATTTGATGGTCAACTACTGGATGTCTATTTTACCCGATCTTTTTACAAACACATACTTGGAGCAAAAGTTACATACCATGATATTGAGGCTGTTGATCCAGATTACTATAAGAATCTGAAATGGATGCTTGAGAATGATGTAAGTGACATCCTTGATCTCACTTTCAGTAGAGATGCAGATGAGGAAAAGCACATCCTGTACGAGAAGACTGAGGTAACCGACTATGAGCTTATCCCTGGTGGAAGAAATATCCGTGTCACAGAAGAAAACAAGCACGAATATGTGGATCTTGTTGCAGAGCATACGCTGACCACAGCCATTCGCCCTCAAATAAATGCTTTCCTGGAAGGATTCAATGAGTTGATACCAAGGCATCTTATCTCAATATTCAATGACAAAGAACTTGAACTCTTGATTAGTGGACTACCTGAAATTGACCTTGATGATCTGAAGGCCAGTACAGAGTACACAGGATACACTGCAGCATCTCCTTTAATACAGTGGTTTTGGGAGGTTGTGCAAGGATTTAGCAAGGAGGACATGGCACGATTGTTGCAGTTTGTCACAGGAACATCAAAGGTTCCATTAGAAGGGTTTAAAGCTCTTCAAGGTATATCTGGTCCTCAAAGATTTCAAATTCACAAAGCATATGGAGCTCCAGAGCGTCTGCCATCAGCTCATACCTGTTTCAATCAGTTAGACCTTCCTGATTATTCTTCAAAGGAACAGCTTAAGGAACGATTGTTGTTGGCCATTCATGAAGCTAGTGAAGGCTTTGGCTTTGGTTGATTTCTTGAAACAACAATTTTATCACACTAATGTTTCTTGCAAATATAGCTGCAGGACACTGCCAAATATCCTTCTGTATTGATTTGGAATCTGCCATATAGTTTCAAGCCAATCTCTGAGGGCTAATACGAAAGTCTATACTGTTGATCTGTACAAATCTATATTTTGTATGTGGAAATCAATTTTCTTGTTCTGGTAATGCTTTAAGCAATTGCTGTGATTATTGATATTGTTGGGAATAGCCCCTACAAGCGAATTAAGGGGTCAAGCTGTATTATTGATTTTGCCTCTTATTCGGTGTTATATGGTCACACCCTGATTAATGTCTAGGACGTGTACAATAAGATAGAATCTGAAAGTTTGGTCAGACTGCTGGATATGTAACTACAAGCAAACCAATTTTATCATCATTTGTTGGGAATTTAATGGAGGTGACCATCAATTGAAGGTTGTTCATCTGGGGGTTGATTTATGTGGAATGGCTTTTAGAAAGGATTGATGCGCATGTTTCAAACCTCCAGTTTTTTAACACTAATTAATGTTGCGTC

Ace file of the UniGene sp_v3.0_unigene2063

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ubiquitin-protein ligase 1 [Arabidopsis thaliana]	-	-	0.0	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	35%
Sma3	E3 ubiquitin protein ligase upl2, putative	-	-	1.42e-08	-

Source	Gene names
Sma3	At1g55860; At1g70320; CHLREDRAFT_129201; F14J16.14; F14J16.37; F17O7.14; F17O7.15; GSVIVT00015074001; GSVIVT00033389001; GSVIVT00033390001; LOC_Os12g24080; MICPUCDRAFT_35032; MICPUN_59359; OSTLU_41898; OSTLU_52147; Os09g0252800; Os12g0428600; OsI_30556; O

Source	GOs	Term	Type	Identity
Sma3	intracellular	GO:0005622	Cellular Component	-
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	ubiquitin-protein ligase activity	GO:0004842	Molecular Function	-
Sma3	binding	GO:0005488	Molecular Function	-
Sma3	ligase activity	GO:0016874	Molecular Function	-
Sma3	acid-amino acid ligase activity	GO:0016881	Molecular Function	-
Sma3	protein modification process	GO:0006464	Biological Process	-
Sma3	ubiquitin-dependent protein catabolic process	GO:0006511	Biological Process	-
Sma3	modification-dependent protein catabolic process	GO:0019941	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Ubiquitin-associated/translation elongation factor EF1B, N-terminal	IPR000449	-	-
Sma3	HECT	IPR000569	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Ubiquitin interacting motif	IPR003903	-	-
Sma3	E3 ubiquitin ligase, domain of unknown function DUF908	IPR010309	-	-
Sma3	E3 ubiquitin ligase, domain of unknown function DUF913	IPR010314	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote	IPR015940	-	-
Sma3	Proteinase inhibitor I25, cystatin, conserved site	IPR018073	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G55860.1	UPL1 ubiquitin-protein ligase 1 chr1:20879900-20895393 REVERSE LENGTH=3930	55%
RefSeq	Arabidopsis thaliana	NP_175982.2	ubiquitin-protein ligase 1 [Arabidopsis thaliana]	55%
RefSeq	Populus trichocarpa	XP_002298873.1	predicted protein [Populus trichocarpa]	58%

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKQ9

Fln msg: No stop codon before M and low homology subject, your sequence is longer than subject: 1564 - 1032

Fln protein: MSLADTDVDDHEDNGLGDEYGDDMVEEDDDDEFPENRVIEVRWREGLDGLNPVQVLGHAGGGGNLVDLSAEPFQGINMDDIFGIRRPVGVDRRRPNGHRPFLERSAVDRGGAFQHPLLTRPAQPGGVAANGSVWPSTGSISRDAAAITGGFDVAHFFIDAPMLAPEHPGGTFFGDRGVGGPPPLLDFSMDPIFFTGRRGPGNGRWTDDGQPQAGAQAAAIAQAVEEEFLSLLRSLTRVDECTSTQGVVPSADDGDGGQQNMGGVMDTDAQTSFTVNNVSVQQNGEQQMNEVEPSQLEQNANVEHGEQRESEFATLTNIEDPDVMMRDEGNETRNRDIESESQDSEGSGATMGESLRSLEVETGSADGHEENERQAGRQAPVASTFGVSDTAAGGLNSGNINNEPGGACSVSQVADTDAGQNPTPDEASVQLQVQDEVVQAADNELAEQSNEESRANTIDPTFLEALPEDLRAEVLASQQVQSTRPANYAPPPAEEIDPEFLAALPPDIQAEVLAQQRAQRVVQTQQAEGQPVDMDSASIIATFPVELREEVLLTSSEAVLAALSPALLAEAQMLRERAMNEYQARSLFGGGHRLGGRRHNMSTGGQTAMDRGVGSNVGLTLGRRPVASLGNSIKMKEVEGKPLVDTGSLKAMLKLLRLAQPLGKGLLQRLLLNLCAHSATREILVHLLLDMLRPEAEGLSADTNDAPSQRLYGCQWNVVYARSQISDGVPPLVSRRVLEILTYLAKNHFCVADLLFYMESSPMLESTSQTSTISIEEKGKGKVVDEAVPYVNASSVGEKGKTPLMLLLKLLNQPLFSRSSAHLEQVMGLLEVIMNNVEVKSVLEAPSGQPKDVLPQGEGVQAGVEAQPETGPHAISTDHAVEPTSVEVNADSEVPRSSVAGKNSESMEASTSGSKMEMVASEILLQLPERELQNLCKLLAKEGLSDTVYTKVAEVLKKLASIAPAHRKLFISELADSARSLSGAAVDELVTLSEMESLGVSTGSMAGAAILRVLQALSTLTSDTGAGATDDKENESLLIVGELNAALDPLWQGLSSCISEIELRLGNISDFSSASSRNAAATNMAPPLPPGTQRVLPFIEAFFVLCEKLQLGPTAVQHDPDDASVSDVTQQRRAEAGMTFVKFAEKHRRLLNAFVRQNPGLLEKSLSLMHKTPRLIDFDNKRSFFRSRIRQQNEQHNYNPLRICVRRTYVLEDSYNQLRMRSVDDIKGRLTVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNQSTFQPNPNSVLQTEHLSYFKFVGRVVAKALFDGQLLDVYFTRSFYKHILGAKVTYHDIEAVDPDYYKNLKWMLENDVSDILDLTFSRDADEEKHILYEKTEVTDYELIPGGRNIRVTEENKHEYVDLVAEHTLTTAIRPQINAFLEGFNELIPRHLISIFNDKELELLISGLPEIDLDDLKASTEYTGYTAASPLIQWFWEVVQGFSKEDMARLLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPDYSSKEQLKERLLLAIHEASEGFGFG*

Protein Length: 1565

Fln nts: TGAGGGTGAAGAGGAAGATGAAGATGAAGATGAGGATGAAGAGGACGACATAGAGGGAGAAGAAGATGGTCCTGCCCAC_-_ATGTCATTAGCTGATACTGATGTTGACGATCATGAAGATAATGGTCTTGGTGATGAGTATGGAGACGACATGGTAGAGGAGGATGATGATGACGAGTTTCCTGAAAATCGTGTTATTGAAGTAAGGTGGAGAGAAGGCTTGGATGGACTGAATCCTGTACAGGTTTTGGGACATGCTGGAGGAGGTGGTAATTTGGTTGATCTTTCAGCAGAGCCTTTTCAGGGAATTAATATGGATGATATATTTGGCATTCGGCGGCCTGTAGGGGTTGACAGACGTCGTCCGAATGGCCATAGACCTTTTCTGGAACGTTCTGCAGTGGATCGTGGAGGTGCCTTTCAACACCCTCTTCTTACCAGGCCTGCACAGCCTGGTGGAGTAGCTGCAAATGGTTCTGTGTGGCCTTCTACTGGGAGCATTTCTAGAGATGCAGCAGCAATAACAGGAGGGTTTGATGTTGCCCATTTTTTCATTGATGCTCCAATGTTGGCCCCAGAACACCCAGGGGGTACATTCTTTGGGGATCGAGGAGTTGGTGGGCCACCGCCTCTGCTTGATTTCTCCATGGATCCTATATTTTTTACTGGAAGGCGTGGTCCAGGTAATGGCAGATGGACTGATGATGGTCAACCACAGGCAGGTGCTCAAGCTGCAGCCATTGCTCAAGCAGTTGAAGAGGAGTTTCTTTCACTATTGCGGAGCCTTACTCGAGTAGATGAGTGCACTTCAACTCAAGGTGTTGTTCCCAGTGCAGATGACGGTGATGGAGGGCAACAGAATATGGGAGGAGTAATGGACACTGATGCTCAGACCAGTTTCACAGTGAACAATGTAAGTGTACAACAAAATGGAGAACAACAAATGAACGAGGTTGAACCATCACAGCTGGAGCAGAATGCTAATGTGGAACATGGTGAACAAAGAGAATCAGAATTTGCTACGTTAACGAATATAGAAGACCCTGATGTAATGATGAGAGATGAGGGGAATGAAACTAGAAATAGGGATATAGAATCTGAAAGTCAAGATAGTGAGGGAAGTGGTGCAACTATGGGTGAAAGCCTCCGCAGCCTGGAAGTTGAAACTGGAAGCGCAGACGGACACGAGGAAAATGAGAGGCAGGCTGGCCGACAGGCACCAGTTGCTTCTACTTTCGGTGTTTCGGATACAGCAGCTGGTGGCTTGAATTCAGGAAACATTAATAATGAACCTGGAGGTGCATGCTCTGTTAGTCAAGTAGCGGACACAGATGCTGGCCAAAATCCTACACCGGATGAAGCATCTGTGCAATTGCAGGTTCAAGATGAGGTTGTTCAAGCTGCAGACAATGAATTAGCTGAGCAAAGCAATGAAGAATCTAGAGCAAACACTATTGATCCTACATTTTTGGAAGCACTTCCAGAGGACCTTCGTGCGGAAGTTCTAGCTTCTCAGCAAGTGCAATCTACACGACCTGCAAATTATGCACCCCCTCCTGCAGAAGAAATTGATCCAGAGTTTCTTGCGGCACTTCCTCCAGATATCCAAGCTGAAGTTTTAGCTCAGCAACGTGCTCAAAGGGTTGTACAAACCCAGCAAGCTGAAGGCCAGCCTGTTGATATGGATAGTGCTTCAATTATTGCTACTTTCCCTGTTGAGCTGCGTGAAGAGGTTCTTCTGACTTCCTCGGAAGCAGTTCTTGCTGCTTTGTCTCCAGCATTGCTGGCAGAAGCACAAATGCTGAGAGAAAGAGCAATGAATGAGTATCAGGCTCGTAGCTTGTTTGGAGGAGGCCATAGGCTAGGTGGCAGACGCCACAATATGTCAACTGGAGGTCAAACTGCAATGGACCGAGGTGTAGGCAGTAATGTTGGCCTTACATTGGGGCGCAGGCCAGTTGCATCCCTTGGTAATTCCATAAAGATGAAAGAAGTTGAAGGCAAACCTCTAGTAGATACAGGGTCTCTGAAAGCTATGCTTAAGCTACTGAGGTTAGCTCAGCCTTTGGGCAAAGGGTTGCTGCAAAGACTTCTATTAAACCTGTGCGCACATAGTGCTACAAGGGAAATATTAGTTCATCTACTGTTAGACATGCTGAGACCAGAGGCAGAAGGCTTATCAGCAGACACAAATGATGCTCCATCTCAGAGACTTTATGGGTGCCAATGGAATGTGGTTTATGCACGTTCTCAAATCTCAGATGGTGTACCACCTCTTGTTTCTCGTCGTGTCCTTGAGATTTTGACATACCTCGCTAAAAATCATTTCTGCGTTGCTGATCTTCTTTTCTACATGGAGTCGTCTCCAATGTTGGAGTCAACATCTCAAACATCTACAATATCAATCGAAGAGAAAGGCAAGGGAAAGGTTGTTGATGAAGCAGTTCCATATGTAAATGCATCGAGTGTGGGTGAAAAGGGGAAGACACCTCTTATGTTACTTTTAAAGCTCCTTAATCAACCATTATTCTCAAGGAGCAGTGCTCATTTGGAGCAGGTTATGGGGCTGCTTGAGGTTATTATGAACAATGTTGAAGTTAAAAGTGTATTAGAAGCTCCCTCTGGTCAACCAAAGGATGTTTTGCCACAAGGGGAAGGTGTTCAAGCTGGAGTTGAAGCCCAACCTGAGACTGGACCCCATGCCATTTCTACGGACCATGCTGTTGAACCTACTTCTGTTGAAGTTAATGCTGATTCTGAGGTACCCAGGAGCTCAGTAGCAGGTAAAAATAGTGAAAGCATGGAAGCTTCAACTTCAGGTTCGAAGATGGAAATGGTTGCATCTGAGATTCTTCTCCAACTTCCTGAGAGAGAGTTGCAAAACCTGTGTAAACTTCTAGCAAAGGAAGGGTTGTCAGATACAGTATACACAAAGGTGGCAGAGGTTCTGAAGAAGTTAGCTAGTATTGCACCTGCTCATCGAAAGCTTTTCATTTCTGAACTGGCAGACTCTGCCCGTAGCCTAAGTGGTGCTGCAGTTGATGAGCTTGTCACTCTCAGTGAGATGGAGTCATTAGGAGTAAGTACTGGTTCGATGGCAGGAGCAGCTATTTTGAGAGTTCTACAAGCATTGAGTACGTTAACATCAGATACTGGTGCTGGGGCCACTGATGACAAGGAAAATGAAAGTCTTTTGATTGTTGGGGAACTAAATGCAGCACTTGATCCATTATGGCAAGGATTGAGTAGTTGTATAAGTGAAATTGAGCTGCGATTGGGAAATATTTCTGATTTCTCTTCTGCATCAAGTAGGAATGCAGCAGCGACTAACATGGCACCACCTCTTCCACCTGGTACCCAAAGGGTTTTGCCATTTATTGAGGCATTTTTTGTTTTATGTGAGAAGTTGCAGCTAGGACCCACTGCTGTGCAACATGATCCTGATGATGCCAGTGTGAGTGATGTTACACAACAAAGAAGAGCAGAGGCAGGTATGACATTTGTAAAGTTTGCGGAAAAACATCGACGGCTTCTGAATGCTTTTGTCCGGCAGAATCCGGGGTTATTAGAGAAGTCTCTTTCTCTTATGCACAAGACACCTCGTCTAATTGACTTTGACAACAAGCGATCATTTTTCCGCTCTCGGATTAGACAACAGAATGAGCAGCACAACTATAATCCACTCCGTATTTGTGTTCGCCGAACATATGTCTTAGAAGATTCTTACAATCAATTACGGATGCGTTCTGTAGATGACATTAAAGGGCGCTTGACTGTGCAATTTCAAGGAGAGGAGGGCATTGATGCTGGTGGTTTAACAAGAGAATGGTACCAACTATTGTCCAGGGTGATATTTGACAAGGGTGCATTGCTATTCACAACTGTCGGGAATCAGTCAACATTTCAGCCTAATCCAAATTCTGTTCTTCAAACAGAACACCTCTCATACTTCAAGTTTGTTGGGCGGGTGGTTGCTAAAGCATTATTTGATGGTCAACTACTGGATGTCTATTTTACCCGATCTTTTTACAAACACATACTTGGAGCAAAAGTTACATACCATGATATTGAGGCTGTTGATCCAGATTACTATAAGAATCTGAAATGGATGCTTGAGAATGATGTAAGTGACATCCTTGATCTCACTTTCAGTAGAGATGCAGATGAGGAAAAGCACATCCTGTACGAGAAGACTGAGGTAACCGACTATGAGCTTATCCCTGGTGGAAGAAATATCCGTGTCACAGAAGAAAACAAGCACGAATATGTGGATCTTGTTGCAGAGCATACGCTGACCACAGCCATTCGCCCTCAAATAAATGCTTTCCTGGAAGGATTCAATGAGTTGATACCAAGGCATCTTATCTCAATATTCAATGACAAAGAACTTGAACTCTTGATTAGTGGACTACCTGAAATTGACCTTGATGATCTGAAGGCCAGTACAGAGTACACAGGATACACTGCAGCATCTCCTTTAATACAGTGGTTTTGGGAGGTTGTGCAAGGATTTAGCAAGGAGGACATGGCACGATTGTTGCAGTTTGTCACAGGAACATCAAAGGTTCCATTAGAAGGGTTTAAAGCTCTTCAAGGTATATCTGGTCCTCAAAGATTTCAAATTCACAAAGCATATGGAGCTCCAGAGCGTCTGCCATCAGCTCATACCTGTTTCAATCAGTTAGACCTTCCTGATTATTCTTCAAAGGAACAGCTTAAGGAACGATTGTTGTTGGCCATTCATGAAGCTAGTGAAGGCTTTGGCTTTGGTTGATTTCTTGAAACAACAATTTTATCACACTAATGTTTCTTGCAAATATAGCTGCAGGACACTGCCAAATATCCTTCTGTATTGATTTGGAATCTGCCATATAGTTTCAAGCCAATCTCTGAGGGCTAATACGAAAGTCTATACTGTTGATCTGTACAAATCTATATTTTGTATGTGGAAATCAATTTTCTTGTTCTGGTAATGCTTTAAGCAATTGCTGTGATTATTGATATTGTTGGGAATAGCCCCTACAAGCGAATTAAGGGGTCAAGCTGTATTATTGATTTTGCCTCTTATTCGGTGTTATATGGTCACACCCTGATTAATGTCTAGGACGTGTACAATAAGATAGAATCTGAAAGTTTGGTCAGACTGCTGGATATGTAACTACAAGCAAACCAATTTTATCATCATTTGTTGGGAATTTAATGGAGGTGACCATCAATTGAAGGTTGTTCATCTGGGGGTTGATTTATGTGGAATGGCTTTTAGAAAGGATTGATGCGCATGTTTCAAACCTCCAGTTTTTTAACACTAATTAATGTTGCGTC

Fln Alignment:

Contig2063___LMHKTPRLIDFDNKRSFFRSRI---RQQNEQHN-YNPLRICVRRTYVLEDSYNQLRMRSVDDIKGRLTVQFQGE-----EGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNQSTFQPNPNS-VLQTEHLSYFKFVGRVVAKALFDGQLLDVYFTRSFYKHILGAKVTYHDIEAVDPDYYKNLKWM--LENDVSDILDLTFSRDADEEKHILYEKTEVTDYELIPGGRNIRVTEENKHEYVDLVAEHTLTTAIRPQINAFLEGFNELIPRHLISIFNDKELELLISGLPE-IDLDDLKASTEYT-GYTAASPLIQWFWEVVQGFSKEDMARLLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPE----RLPSAHTCFNQLDLPDYSSKEQLKERLLLAIHEASEGF
B8LKQ9______________LLKRAPFLVPFTNRVQIYTSQLAAARQQNSFHTPFVRHRIRIRRNRAVEDAFSELNGLTGEELRGMIRVIFVNEFGVEEPGVDGGGIFKDFMENITKTAFDIQYGLFKETADHLLY-PNPASGTIHPEHLQYFEFLGKILGKAMFEGILVDIPFATFFLSKLKEKHNYLHDLPSLDPELYRSLLSLKHYDGDVSE-LGLYFVSENN-------EYGEQKEEEMLPGGKDMQVTNENVIKFIHLMANHHLNSQIRNQSSYFLRGFQQLIQSDWLNMFNEHELQLLISGSTEGMDVDGLRSNVHYAGGYSEDHPVIEMFWEVIKQFSLEQQKKFLKFVTGCSRGPLLGFKYLE---PPFCIQRAAPEDAPEEVLDRLPTSATCVNLLKLPPYRSKDVLRSKLLYAI-SADAGF

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
1096	16			83	0.994512
1128		85		14	0.993533
1129			14	85	0.993533
1130	85		14		0.993533
1131			14	85	0.993533
1177		85		14	0.993533
1234		80		20	0.995493
2184	12		87		0.992554
2185	87			12	0.992554
2186		87	12		0.992554
2187	87			12	0.992554
2270	85		14		0.993533
2292		85		14	0.993533
3058	33		66		0.997452
3061	66			33	0.997452
3129	25			75	0.996473
3184	80		20		0.995493
3193		20		80	0.995493
3205	83		16		0.994512
3229			14	85	0.993533
3230	85		14		0.993533
3231			14	85	0.993533
3330	85		14		0.993533
3371	50		50		1.0
3547	14	85			0.993533
4179	88		11		0.999952
4227	10		90		0.90298
4292	60		40		1.0
4293	16	83			0.994512
4296	83		16		0.994512
4297		83	16		0.994512
4350	83		16		0.994512
4779		66		16	0.988813
4824		90		10	0.90298

SSRs (tot: 1)

Start position	End position	Sequence	Length
14	33	GAAGAT GAAGAT GAAGAT GA	20

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain