SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene2061

Length: 1816 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene2061

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	golgi nucleotide sugar transporter 3 [Arabidopsis thaliana] sp\|Q9S845.1\|GONS3_ARATH RecName: Full=GDP-mannose transporter GONST3; AltName: Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 gb\|AAF16667.1\|AC012394_16 unknown protein; 69155-70273 [Arabidopsi	-	-	0.0	61%
FL-Next	sp=GDP-mannose transporter GONST3; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	69%
Sma3	GDP-mannose transporter, putative	-	-	1.497e-08	-

Source	Gene names
Sma3	At1g76340; At5g19980; F15M4.16; GSVIVT00004097001; GSVIVT00016826001; GSVIVT00029942001; GSVIVT00035195001; LOC_Os03g11590; OJ1014_H11.22; OSJNBb0079G12.18; Os02g0154600; Os03g0215000; Os08g0203900; OsI_05898; OsI_05900; OsI_10524; OsI_28203; OsI_28990; O

Source	GOs	Term	Type	Identity
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	sugar:hydrogen symporter activity	GO:0005351	Molecular Function	-
Sma3	carbohydrate transport	GO:0008643	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	UAA transporter	IPR013657	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G76340.1	GONST3 golgi nucleotide sugar transporter 3 chr1:28635188-28636306 REVERSE LENGTH=372	69%
RefSeq	Arabidopsis thaliana	NP_177760.1	golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]	69%
RefSeq	Populus trichocarpa	XP_002314544.1	predicted protein [Populus trichocarpa]	69%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9S845

Fln msg:

Fln protein: MQGIEQGDEVKGSSAPFEEVQQPCLASMRAFMQGAYVYGIVAGYCVSASLLSIINKWAIMKFPFPGSLTAMQYFSSVSGVLILGWLKLLEHDKLDLQTMWRFLPAAMVFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLKQPCPPVKTWCSLAVIFVGGLIYVLTDYHLTMAAYSWALAYLVSMSIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPFELIIMGEFQQLKHDSSLQSGLCSFEVLLPVGLSCLFGLSISFFGFSCRKSISATGFTVLGVVNKLLTIVINLMIWDKHTTLVGTMGMLICMLGGIFYQQSATKSRSIASDAVPNDEEKVLLKLPSSELEASAKEAVAKET*

Protein Length: 369

Fln nts: ATGTATATTAATGATCCCGTTTTCTGTCCCGAGATATGCCGTTGCTGTAAACCGTATTGTCGTCAAGGAGGTAGTTGTTGGTATGCATGCATTCATGTGCGAAGAAGAGCAAGAGCTGATACAAAGTTGGGTTCTCTGTTATTGACAAATACCGAGCAGAGTAGGGTGCACATTCGTATTTTCTGCCGCTTGCATTGTATTTTCAGATTCTTCACAG_-_ATGCAGGGGATTGAACAAGGTGACGAAGTGAAGGGAAGTTCAGCACCTTTTGAAGAAGTGCAACAACCATGTTTGGCTTCAATGAGAGCATTTATGCAGGGAGCTTATGTTTATGGTATTGTGGCTGGGTATTGTGTTTCTGCATCCCTGTTATCAATCATCAACAAGTGGGCGATCATGAAATTTCCTTTTCCTGGATCTTTGACCGCTATGCAATATTTTTCAAGTGTGTCAGGAGTACTCATACTTGGCTGGTTGAAACTTTTGGAACATGATAAACTTGATTTACAAACTATGTGGAGATTTTTACCTGCTGCAATGGTCTTCTATTTATCACTGTTCACAAATAGTGAACTACTGCTCCATGCAAATGTTGATACATTTATTGTATTCCGGTCTGCTGTTCCCATCTTTGTTGCCATTGGTGAAACTCTCTTCCTGAAGCAACCTTGTCCTCCTGTCAAAACTTGGTGTTCTCTAGCCGTTATCTTTGTAGGAGGTTTAATTTATGTGCTAACTGATTATCATCTCACTATGGCAGCTTATAGCTGGGCATTGGCATACTTGGTAAGTATGTCAATAGATTTTGTGTATATTAAGCATGTTGTCATGACAATCGGGTTGAACACTTGGGGTTTGGTGTTGTACAATAATTTGGAGGCCTTACTTCTTTTCCCGTTTGAGTTAATTATTATGGGGGAATTTCAGCAGTTGAAACATGATAGCTCACTGCAATCTGGATTGTGTTCTTTTGAAGTTTTACTGCCAGTTGGGCTATCCTGCTTGTTTGGATTATCCATATCATTTTTTGGCTTTTCCTGCCGCAAAAGTATATCTGCAACAGGCTTCACAGTCCTAGGTGTTGTTAACAAGCTGCTTACAATTGTTATCAATCTGATGATTTGGGATAAGCATACGACTCTTGTAGGAACAATGGGAATGCTAATATGCATGCTTGGAGGAATATTTTACCAGCAGTCAGCAACAAAGTCTCGATCTATAGCTTCTGATGCTGTTCCCAATGATGAGGAGAAAGTGCTCCTGAAGCTTCCATCTTCAGAGCTGGAAGCTTCTGCAAAGGAGGCTGTTGCAAAGGAAACTTGA___GCGGCATTTTATTGTGTATAGAAGTTCCGATTCAGCTAGACTCTATTCTATCAAAACTAGGCATAACAAACACTGAGATAAATGATTGTGGACTTCCGGTAATAGTTGAAGTCATTGACTGGAGACAAAGATTGCTCAAACTATCATCTCTCTTGATAGACAAATCAGAGGCCGTTTCAACCATGAACATGAAAAAGATGATGGATGCAGTTAAATACATAAAATATTACAGTATTCATCTAAAATATATTTGAAGTGATGGGTGCAGAAAACATTTTTCTGCTCATTCTCTGGAAATATGAGTTTATGGTTGTACTTATTGGCAATTGACTAGGAATTTAGCTGGCTAATCATATCTAACAACCACTGGTGCTGAAACGTTCACTTGGAAAAAAAAAAATATTTTAAGTGAGCATATTTTGTTATCCTGCATTCATTGACATTTGGAAAGACGTATTTCATATATTTCGTAAGTTAAATTTTTAGTAATACTCA

Fln Alignment:

Contig2061___DEVKGSSAPFEEVQQPCLASMRA-FMQGAYVYGIVAGYCVSASLLSIINKWAIMKFPFPGSLTAMQYFSSVSGVLILGWLKLLEHDKLDLQTMWRFLPAAMVFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLKQPCPPVKTWCSLAVIFVGGLIYVLTDYHLTMAAYSWALAYLVSMSIDFVYIKHVVMTIGLNTWGXXXXXXXXXXXXFPFELIIMGEFQQLKHDSSLQSGLCSFEVLLPVXXXXXXXXXXXXXXXXXRKSISATGFTVLGVVNKLLTIVINLMIWDKHTTLVGTMGMLICMLGGIFYQQSATKSRSIASDAVPNDEEKVLLKL
Q9S845______________DEENGTVIEVKNVPEPSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTDYQFTIAAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLGIVNKLLTVVINLMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQEAKPQEQDEEQEKL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain