SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene1879

Length: 3620 nt

UniGene Fasta

>sp_v3.0_unigene1879
GACGGGAAACTGGAGAAGAGCACGAGAAAAGCTTGAAGAATTTCGTAGCACCATAACTGTTAGAATTGAATCGAGTTTACGAACCAGGAGATTGAGAAGATCAAGAGAAACAGATTGAGGAATTTCGCAGGATCATATCTGTCGGATTGAATCGAGTTTAAGATAAGGCAATAAAGAATCAGGTCGTAAGAAAATGGAGATGGAAGTGAGCATAGGCGAGAGCGAAAAGACTCTGAAAGAACGCTTGGGCGCCAATACCCTTCGGGTAATAGCCCCTCCAGAATTGGCAATGCAGACCAGGCTAAGTATGAACATGTCACAACTACAGAGCTTGGACAGTGAGAGTGTTGGTAGTCATGGTCAGGTTAGAGACCCCATGGTTTTTGAGCTCCAAAAACGGGTATTTAGTTTACGAGAGGCCTTAGAGCTCCCACCTCGCAATGTATCGGCAAATCTAGATGAGTTATTATCGAGCACCATGGAAACACTTTATAAGTTGTCTCCAGTGAAAGCACCTTCAGCATTCTCATGTTTGTCCTCAGAAGGAGATCAGAAGCCTACTATCCAGAGGTTGCAGCAATTTTACAAGTCGCTTCGATTTATGGAAGACACCTGGGTAGACTCATTTGATCATAAGGTCGGTGACTTCGCTGAAGAAAAGAGCACAAATGATGCAGACCTCAATGGAGAGCAATATTCTTCAGTGTTTAGAACTTCCACTAGTGCTCTGAAGAGAATCGATTTGAAGAACAATAGAAGTCAAGGCCACAAGCGAAAGCCATTTGAGGACACTTGTAATCTGGAACAACTATGTCGAAGGATTTTTGAGACGCTAGATGATATAAGTAGGAGAGCAAGGAACAGACTTGAGATGAAAAAGGATAATGAATGCCGGGGCGCAGTAACCTATGAGATTTCAGATTCTTCAGAATCCTCAGAGTATTTAGAGAGCAAGGCTTATAACCAAGCTCCGCTCACCCCTACATCAGTTTTGGAAGAGAGCAGCCAAACTTCAGTGAAACCAAGGATTTTTGTGAATGCTTTTGCTCCACCTTTACTTTGGCTTCCAAGAAATCTGGTTACTGGTAGCTCGCATCCAATTTGTTTCAAGGACCTTACTCCCAATATTGGCACCCAAGGTCTTGATCCTAAAAATTCTTTGACAACTAATGTGGACAAGATGCAGAGACAACAACCCAGCAATACTGAGAAGTGCACCAAAGGTCCTGCTCTTAAACATTCGTTGACAACTCATCTAGACGAGACACAGAGAAATCAACCTAGAAAATGTAGAAAGAGGGTTAATGGTGTTGACGTTTCAACCTGGGAGAATTCTGACTCCAAATCTGTAGTTCAAATTTCCGAGCATAGCAAGCCAGTTGGTGAAAGGAACAAGCCACTAAAAACAATCACAAACACTATCAAACAAACTGACAATTCTCATAACAGTACTTCCACAAAATTGATCTCCCCGCCTCCAACTATGGTGTCAACTCTACCTCTATCTCCACCCATGGAACCGACTAAATCTCTTTCTCTGCCTCCTTCCATGGAAGTGGCCACACCTCCACCTGCACCCACGGTACGGGCTAAATGTCTTACTAATCATTCTTTAACAACTAATGTGGACAAGATGCAGAGAGAGCAACCAAGCAATTTTAGAAAGAGTACTAATGGTGTTAACTTCTCTGCTTCTGAGAATCCTGATTCCAGATGTAGAGTTCAAATTTTCGAACATAACAAGCCTGTTGGTGAAAGCAACCAACCACTAAAAAGAATTACAAAGACTATTCAAGAAAGTGACAATTCCAGTAACAATACTTCTGCAAAACTGACCTTCCCACCTCCATCCACTGTGTCAACTCCACCTCTGCCACCACCCACGGTACCAGCTAAATCTCCACCTCTGCCTCCACCTCCATCCCCGCCACCTCTGCCTCCACCCACGTCACCAGCTAAATATCCACCTCTGCCTCCACCCACGGTACCAGCTAAATCTCCACCTCTGCCTCTGCCTCCACCTCCACCCCCACCACCTCTTCCTCCACCCACGGTACCATCTAAATCTCCACCTCTGCCTCCACCTCCACCACCTCTGCCTCCATCCACGGTACCATCTCAATCTCCACCTCTACCTCCACCCACGGTACCAGCTAAATCTCTACCTCTACCTCCACCCACGGTACGAGCTAAATCTCTACCTCCGCCCCCACCACCTCTGCCTCCACCCACGGTACCATCTAAATCTCTACCTCTGCCTCCATCCACGGTACCAGCTAAATCTCTTCCTCTGCCTCCTCCTCCACCCCCATCGAATGCCTGTAAAGCCTTGCGACCAAGGAGATCAAATACAAAATTGAAGAGATCAAATCAGATGGGTAACCTCTATAGAGTTTTGAAGGGCAAAGTGGAGGGGGCTGGCCAAACAGGCAAATCATCACAAAGTCGCAGAAAATCGATTGGTGGTGGCAGTAATAACAGCACCCAAAGCATGGCTGAGGCCCTTGCAGAAATAACTAGAAGGTCATCTTATTTTCAGCAGATACAAGAAGATGCACAACACTTTGCGACCCAGATTATGGAAATGAAGCACGCTATTGAATGCTTTGAAACAAGAAATATGGATGAATTATTGAAGTTTCACCATTATGTTGAACTTCACCTTGAGGACTTGACAGACGAAACCCAGGTTTTGGCAAGGTTTGAAGGTTTCCCAACCAAAAAACTGGAAGTAGTTCGGGCTGCAGCGACACTTTACACTAAATTAAGTTCCATAGCCGATCATCTTAATACCTTGCAGGTTGTGGCTCCATTGTCTCGGCAACTTGATAGGGTTACGTGCTACTTTGACAAGATCAAAATGGAGGTGGAGACTTTGGAGCGCATTAAGGATGAAGAAGCAAAACGCTTCGAGAGACATAAAATATTCTTTGACTTCAATGTACTTATTCGCATCAAGGAATCAATGGTTGATGTTTCTTCTAACTGTATAGCTCTAGCATTGGAGGAGAGCAAGGCAACCAAAGCAGCTCCAAGTAAAGGTATTGGTGACATGATGGATGCATGTGATGACCGTCGGTTGCGGACATGCTTGCAGATGCTATGGAGGGTTTTTCAGTTATCTTTCAGAGTTTACAATTTCGCTGGGGGTCAGGATGAACGTGCAGAGGAATTGACCAGTGCTTTGGCCAGAGAAATGCAAACGTACCCTCAGCAATGTTGGTCCATTTGATGTTATAATTTGTAGGTATTGAGGCCGTCTGTGGCCTCTTTCTGTTGGAACTGTCATTGACTCTTTGGCTTTTTATTGGTTCAAGAGCTATCTATTAAATTGAAAAGGATCATAGATTAGCTAAACAGGAGGTAGAAATTATTTTGTGCTTGTTTTGTTGGAAGGAATAATCGTCTTTCAGAGTGGAGTGAGACTCGAGCCATCTTTATCTTTAGGAGCTCCTTTATTGTATTTATAATTGGGAGGGAATCAAACTGGGTCATTCTTCCACAAGTTTATGCTTTGGAGTCTATACATATTTATTAAAAAGAATAAATGTACAGATGTGTCATTCCAGAAGAATTAGAATTTAGTAATACAAATAAATGTACAGACATGTCATTACTAG

Ace file of the UniGene sp_v3.0_unigene1879

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI	-	-	0.0	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	20%
Sma3	Extensin	-	-	3.825e-13	-

Source	Gene names
Sma3	AT4g04980; AT4g13340; AT4g15160; AT4g22020; AT4g22500; At1g12040; At1g26250; At2g05580; At2g15880; At2g36120; At3g17050; At4g01985; At4g04980; At4g13340; At4g32710; At5g46730; B1103C09.1-1; CHLREDRAFT_10029; CHLREDRAFT_195673; CHLREDRAFT_195828; Ext1.2A;

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	extracellular space	GO:0005615	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	proteasome core complex	GO:0005839	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	myosin complex	GO:0016459	Cellular Component	-
Sma3	outer membrane	GO:0019867	Cellular Component	-
Sma3	nucleic acid binding	GO:0003676	Molecular Function	-
Sma3	motor activity	GO:0003774	Molecular Function	-
Sma3	actin binding	GO:0003779	Molecular Function	-
Sma3	metalloendopeptidase activity	GO:0004222	Molecular Function	-
Sma3	threonine-type endopeptidase activity	GO:0004298	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	structural constituent of cell wall	GO:0005199	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	sugar binding	GO:0005529	Molecular Function	-
Sma3	chitin binding	GO:0008061	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	transition metal ion binding	GO:0046914	Molecular Function	-
Sma3	cell morphogenesis involved in differentiation	GO:0000904	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	proteolysis	GO:0006508	Biological Process	-
Sma3	ubiquitin-dependent protein catabolic process	GO:0006511	Biological Process	-
Sma3	lipid transport	GO:0006869	Biological Process	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	plant-type cell wall organization	GO:0009664	Biological Process	-
Sma3	unidimensional cell growth	GO:0009826	Biological Process	-
Sma3	trichoblast differentiation	GO:0010054	Biological Process	-
Sma3	cellular component organization	GO:0016043	Biological Process	-
Sma3	actin cytoskeleton organization	GO:0030036	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Glutamine amidotransferase, class-II	IPR000583	-	-
Sma3	ROK	IPR000600	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Ricin B lectin domain	IPR000772	-	-
Sma3	Chitin-binding, type 1	IPR001002	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Proteasome, subunit alpha/beta	IPR001353	-	-
Sma3	Peptidase M12B, ADAM/reprolysin	IPR001590	-	-
Sma3	Myosin head, motor domain	IPR001609	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Blood coagulation inhibitor, Disintegrin	IPR001762	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Thiolase	IPR002155	-	-
Sma3	Cell surface receptor IPT/TIG	IPR002909	-	-
Sma3	Argonaute/Dicer protein, PAZ	IPR003100	-	-
Sma3	Actin-binding FH2/DRF autoregulatory	IPR003104	-	-
Sma3	Stem cell self-renewal protein Piwi	IPR003165	-	-
Sma3	Alphaherpesvirus glycoprotein E	IPR003404	-	-
Sma3	Apple-like	IPR003609	-	-
Sma3		IPR003612	-	-
Sma3	Pistil-specific extensin-like protein	IPR003882	-	-
Sma3	Domain of unknown function DUF292, eukaryotic	IPR005061	-	-
Sma3	Peptidase, metallopeptidase	IPR006026	-	-
Sma3	Pollen Ole e 1 allergen/extensin	IPR006041	-	-
Sma3	Outer membrane autotransporter barrel	IPR006315	-	-
Sma3	Parallel beta-helix repeat	IPR006626	-	-
Sma3	Extensin repeat	IPR006706	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Peptidase M11, gametolysin	IPR008752	-	-
Sma3	Root cap	IPR009646	-	-
Sma3		IPR010847	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Plant lipid transfer protein/hydrophobic protein helical domain	IPR013770	-	-
Sma3	Peptidase M10B, serralysin, C-terminal	IPR013858	-	-
Sma3	Tensin phosphatase, C2 domain	IPR014020	-	-
Sma3	Domain of unknown function DUF1785	IPR014811	-	-
Sma3	Actin-binding FH2	IPR015425	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	Homeobox, conserved site	IPR017970	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G04980.1	" unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other E	49%
RefSeq	Arabidopsis thaliana	NP_567279.3	uncharacterized protein [Arabidopsis thaliana]	49%
RefSeq	Populus trichocarpa	XP_002317226.1	predicted protein [Populus trichocarpa]	54%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NUN1

Fln msg: your sequence is longer than subject: 1013 - 314

Fln protein: MEMEVSIGESEKTLKERLGANTLRVIAPPELAMQTRLSMNMSQLQSLDSESVGSHGQVRDPMVFELQKRVFSLREALELPPRNVSANLDELLSSTMETLYKLSPVKAPSAFSCLSSEGDQKPTIQRLQQFYKSLRFMEDTWVDSFDHKVGDFAEEKSTNDADLNGEQYSSVFRTSTSALKRIDLKNNRSQGHKRKPFEDTCNLEQLCRRIFETLDDISRRARNRLEMKKDNECRGAVTYEISDSSESSEYLESKAYNQAPLTPTSVLEESSQTSVKPRIFVNAFAPPLLWLPRNLVTGSSHPICFKDLTPNIGTQGLDPKNSLTTNVDKMQRQQPSNTEKCTKGPALKHSLTTHLDETQRNQPRKCRKRVNGVDVSTWENSDSKSVVQISEHSKPVGERNKPLKTITNTIKQTDNSHNSTSTKLISPPPTMVSTLPLSPPMEPTKSLSLPPSMEVATPPPAPTVRAKCLTNHSLTTNVDKMQREQPSNFRKSTNGVNFSASENPDSRCRVQIFEHNKPVGESNQPLKRITKTIQESDNSSNNTSAKLTFPPPSTVSTPPLPPPTVPAKSPPLPPPPSPPPLPPPTSPAKYPPLPPPTVPAKSPPLPLPPPPPPPPLPPPTVPSKSPPLPPPPPPLPPSTVPSQSPPLPPPTVPAKSLPLPPPTVRAKSLPPPPPPLPPPTVPSKSLPLPPSTVPAKSLPLPPPPPPSNACKALRPRRSNTKLKRSNQMGNLYRVLKGKVEGAGQTGKSSQSRRKSIGGGSNNSTQSMAEALAEITRRSSYFQQIQEDAQHFATQIMEMKHAIECFETRNMDELLKFHHYVELHLEDLTDETQVLARFEGFPTKKLEVVRAAATLYTKLSSIADHLNTLQVVAPLSRQLDRVTCYFDKIKMEVETLERIKDEEAKRFERHKIFFDFNVLIRIKESMVDVSSNCIALALEESKATKAAPSKGIGDMMDACDDRRLRTCLQMLWRVFQLSFRVYNFAGGQDERAEELTSALAREMQTYPQQCWSI*

Protein Length: 1014

Fln nts: GACGGGAAACTGGAGAAGAGCACGAGAAAAGCTTGAAGAATTTCGTAGCACCATAACTGTTAGAATTGAATCGAGTTTACGAACCAGGAGATTGAGAAGATCAAGAGAAACAGATTGAGGAATTTCGCAGGATCATATCTGTCGGATTGAATCGAGTTTAAGATAAGGCAATAAAGAATCAGGTCGTAAGAAA_-_ATGGAGATGGAAGTGAGCATAGGCGAGAGCGAAAAGACTCTGAAAGAACGCTTGGGCGCCAATACCCTTCGGGTAATAGCCCCTCCAGAATTGGCAATGCAGACCAGGCTAAGTATGAACATGTCACAACTACAGAGCTTGGACAGTGAGAGTGTTGGTAGTCATGGTCAGGTTAGAGACCCCATGGTTTTTGAGCTCCAAAAACGGGTATTTAGTTTACGAGAGGCCTTAGAGCTCCCACCTCGCAATGTATCGGCAAATCTAGATGAGTTATTATCGAGCACCATGGAAACACTTTATAAGTTGTCTCCAGTGAAAGCACCTTCAGCATTCTCATGTTTGTCCTCAGAAGGAGATCAGAAGCCTACTATCCAGAGGTTGCAGCAATTTTACAAGTCGCTTCGATTTATGGAAGACACCTGGGTAGACTCATTTGATCATAAGGTCGGTGACTTCGCTGAAGAAAAGAGCACAAATGATGCAGACCTCAATGGAGAGCAATATTCTTCAGTGTTTAGAACTTCCACTAGTGCTCTGAAGAGAATCGATTTGAAGAACAATAGAAGTCAAGGCCACAAGCGAAAGCCATTTGAGGACACTTGTAATCTGGAACAACTATGTCGAAGGATTTTTGAGACGCTAGATGATATAAGTAGGAGAGCAAGGAACAGACTTGAGATGAAAAAGGATAATGAATGCCGGGGCGCAGTAACCTATGAGATTTCAGATTCTTCAGAATCCTCAGAGTATTTAGAGAGCAAGGCTTATAACCAAGCTCCGCTCACCCCTACATCAGTTTTGGAAGAGAGCAGCCAAACTTCAGTGAAACCAAGGATTTTTGTGAATGCTTTTGCTCCACCTTTACTTTGGCTTCCAAGAAATCTGGTTACTGGTAGCTCGCATCCAATTTGTTTCAAGGACCTTACTCCCAATATTGGCACCCAAGGTCTTGATCCTAAAAATTCTTTGACAACTAATGTGGACAAGATGCAGAGACAACAACCCAGCAATACTGAGAAGTGCACCAAAGGTCCTGCTCTTAAACATTCGTTGACAACTCATCTAGACGAGACACAGAGAAATCAACCTAGAAAATGTAGAAAGAGGGTTAATGGTGTTGACGTTTCAACCTGGGAGAATTCTGACTCCAAATCTGTAGTTCAAATTTCCGAGCATAGCAAGCCAGTTGGTGAAAGGAACAAGCCACTAAAAACAATCACAAACACTATCAAACAAACTGACAATTCTCATAACAGTACTTCCACAAAATTGATCTCCCCGCCTCCAACTATGGTGTCAACTCTACCTCTATCTCCACCCATGGAACCGACTAAATCTCTTTCTCTGCCTCCTTCCATGGAAGTGGCCACACCTCCACCTGCACCCACGGTACGGGCTAAATGTCTTACTAATCATTCTTTAACAACTAATGTGGACAAGATGCAGAGAGAGCAACCAAGCAATTTTAGAAAGAGTACTAATGGTGTTAACTTCTCTGCTTCTGAGAATCCTGATTCCAGATGTAGAGTTCAAATTTTCGAACATAACAAGCCTGTTGGTGAAAGCAACCAACCACTAAAAAGAATTACAAAGACTATTCAAGAAAGTGACAATTCCAGTAACAATACTTCTGCAAAACTGACCTTCCCACCTCCATCCACTGTGTCAACTCCACCTCTGCCACCACCCACGGTACCAGCTAAATCTCCACCTCTGCCTCCACCTCCATCCCCGCCACCTCTGCCTCCACCCACGTCACCAGCTAAATATCCACCTCTGCCTCCACCCACGGTACCAGCTAAATCTCCACCTCTGCCTCTGCCTCCACCTCCACCCCCACCACCTCTTCCTCCACCCACGGTACCATCTAAATCTCCACCTCTGCCTCCACCTCCACCACCTCTGCCTCCATCCACGGTACCATCTCAATCTCCACCTCTACCTCCACCCACGGTACCAGCTAAATCTCTACCTCTACCTCCACCCACGGTACGAGCTAAATCTCTACCTCCGCCCCCACCACCTCTGCCTCCACCCACGGTACCATCTAAATCTCTACCTCTGCCTCCATCCACGGTACCAGCTAAATCTCTTCCTCTGCCTCCTCCTCCACCCCCATCGAATGCCTGTAAAGCCTTGCGACCAAGGAGATCAAATACAAAATTGAAGAGATCAAATCAGATGGGTAACCTCTATAGAGTTTTGAAGGGCAAAGTGGAGGGGGCTGGCCAAACAGGCAAATCATCACAAAGTCGCAGAAAATCGATTGGTGGTGGCAGTAATAACAGCACCCAAAGCATGGCTGAGGCCCTTGCAGAAATAACTAGAAGGTCATCTTATTTTCAGCAGATACAAGAAGATGCACAACACTTTGCGACCCAGATTATGGAAATGAAGCACGCTATTGAATGCTTTGAAACAAGAAATATGGATGAATTATTGAAGTTTCACCATTATGTTGAACTTCACCTTGAGGACTTGACAGACGAAACCCAGGTTTTGGCAAGGTTTGAAGGTTTCCCAACCAAAAAACTGGAAGTAGTTCGGGCTGCAGCGACACTTTACACTAAATTAAGTTCCATAGCCGATCATCTTAATACCTTGCAGGTTGTGGCTCCATTGTCTCGGCAACTTGATAGGGTTACGTGCTACTTTGACAAGATCAAAATGGAGGTGGAGACTTTGGAGCGCATTAAGGATGAAGAAGCAAAACGCTTCGAGAGACATAAAATATTCTTTGACTTCAATGTACTTATTCGCATCAAGGAATCAATGGTTGATGTTTCTTCTAACTGTATAGCTCTAGCATTGGAGGAGAGCAAGGCAACCAAAGCAGCTCCAAGTAAAGGTATTGGTGACATGATGGATGCATGTGATGACCGTCGGTTGCGGACATGCTTGCAGATGCTATGGAGGGTTTTTCAGTTATCTTTCAGAGTTTACAATTTCGCTGGGGGTCAGGATGAACGTGCAGAGGAATTGACCAGTGCTTTGGCCAGAGAAATGCAAACGTACCCTCAGCAATGTTGGTCCATTTGA___TGTTATAATTTGTAGGTATTGAGGCCGTCTGTGGCCTCTTTCTGTTGGAACTGTCATTGACTCTTTGGCTTTTTATTGGTTCAAGAGCTATCTATTAAATTGAAAAGGATCATAGATTAGCTAAACAGGAGGTAGAAATTATTTTGTGCTTGTTTTGTTGGAAGGAATAATCGTCTTTCAGAGTGGAGTGAGACTCGAGCCATCTTTATCTTTAGGAGCTCCTTTATTGTATTTATAATTGGGAGGGAATCAAACTGGGTCATTCTTCCACAAGTTTATGCTTTGGAGTCTATACATATTTATTAAAAAGAATAAATGTACAGATGTGTCATTCCAGAAGAATTAGAATTTAGTAATACAAATAAATGTACAGACATGTCATTACTAG

Fln Alignment:

Contig1879___SNTKLKRSNQMGNLYRVLKGKVEGAGQTGKSSQSRRKSIGGGSNNSTQSMAEALAEITRRSSYFQQIQEDAQHFATQIMEMKHAIECFETRNMDELLKFHHYVELHLEDLTDETQVLARFEGFPTKKLEVVRAAATLYTKLSSIADHLNTLQVVAPLS--RQLDRVTCYFDKIKMEVETLERIKDEEAKRFERHKI----FFDFNVLIRIKESMVDVSSNCIALALEESKATKAAPSKGIGDMMDACDDRRLRTCLQMLWRVFQLSFRVYNFAGGQD
A9NUN1______________SGNKVHRAPELVEFYQSLMKR---------EAKKEAATMASAASNVADVRNNMIGEIENRSAFLLSVKADVETQGDFVQALATEVRASAYKNIEDVVAFVNWLDEELSFLVDERAVLKHFD-WPESKADALREAAFEYQDLKRLESVAASFVDNPNLSCDAALKKMYSLLEKVEQSVYALLRTRDMAIARYKEFNIPTDWLLDSGVVGKIKLASVQLARKYMKRVTSELDAALNDPDK-----------EPIKEFL--LLQGVRFAFRVHQFAGGFD

SNPs (tot: 30)

Position	A %	C %	G %	T %	Probability
915		25		75	0.996473
916			25	75	0.996473
920	75			25	0.996473
924		25		75	0.996473
928		75	25		0.996473
929	75		25		0.996473
930		25	75		0.996473
931	75			25	0.996473
932	75		25		0.996473
959		50		50	1.0
1194		42	57		1.0
1199	85		14		0.993533
1260	50	50			1.0
1274		33	66		1.0
1325	66			33	1.0
1338			12	87	0.992554
1342	87			12	0.992554
1344		12		87	0.992554
1345		42		57	1.0
1474		75		25	0.996473
1533		40		60	1.0
1563			50	50	1.0
1614	11			88	0.923564
1739	50		50		1.0
1763	40	60			1.0
1801	75		25		1.0
1853	90			10	0.90298
3353	25			75	1.0
3361	75	25			1.0
3495	35		64		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain