SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene1753

Length: 7119 nt

UniGene Fasta

>sp_v3.0_unigene1753
GTCACAAAATAATCTTCGCCAGTCTCTACAGCAGCAGCTTCTACGGAAATCTCAAGGAGATGAAGCTCTCCTGGCCTATCAAGCAGGTGGCCTTCAAGGTATTATGGGGGGTAGTAGTATCTGTGGGCCATCTGGCTCAATTCAATTGCCCCAGCACCCTAGAAATTTCATGGATATAGCTCAACAGCCACAGGTTGCTTCTCAAGTTCAAGATGAAGGGCAGGGCAAAGCTCAAAATCAGATGCATGCTCAAGCCTCCTATCTGCAGTACGCTCTTCAGGCTGCCCAGCATAAGGCTCGTGCTAATATTCAATCTCAGCAGCAGGGTAAAGGAGGTTTAATTGGTCCGTCTGTAGTAGACCCAGATCAACTTAATACTTTGAAGCTTCAAGAACTTATGAGGATGCAGGCAGCAAGCCAGGCACAAGCATCTATGTTTAAGAAGTCACCTGGTCAGCTTGTACAGATGGAGAAGCATATGGAGCAAGGACAGACTAGCAATGACTTGAGAAGTGAAATGAAGTCCCAGCAGGCACAGATGGCTCAGTTATCAGGTAACATGGGAAGACCAGGGCAAGGGCTGCAAAATCAACATCCAATGCAAAATCTTGCAAACAGCCAGTATGCTAATATTGCTCACATACAAGCTCTTCAGGCTTGGGCCTTGGATAAGAATATAGATATTTCATCTCCTGCAAATGCACATCTTATTCCTCAACTTTTGCTCCAGTTTCAAGCTCGTTTAGTGGCAATGCAGAAAGCTAATGATGGTAATCATGCTGCACATCAGACTCATATGTTGCCAGCAAAAGCACATATTGCTTCTTCATCATCAGTCCAGGATTATGCGGGACCCAGCAATGGAAATGTTGGACATGGAAACTCTGTCCCCAAAGGGCATGTTGTTCAAGGGGGTTTGTATCCAAAACCAAGGCCAGCAGTTACAACTGGAACAGTACCAGCAACTGGATATCCAGCAATGAGTAATTCTACTGCTGTTCAGACACAACACCCCATTTCCCAAGGTGGAGATTATCAGATTGATCGGGCAGATAGGCATCAGAATTCTTCTGCGTGTACGATGGCTTCTATGCACGGGATTTCCTCCTCAGCTACTGCTGTGACTCAGATAGGAGATGCTTCAGTTGGAAAGAACATGCAGGTTTCTCCAGAGTCATTACAGATGCAATTCTACAGGCAGCAGCTTCAATCAAACAGATCTTCCTTACACCCAGCAGGTTCAAATGAAGTATCAACATCAAACCCTATTGCAAATCCACAAGTTAATCATTCAGGACCAGTGCAACATCAACAGTATGGCTTTACAAGGCAGCAATTGCATGTTCTTAAAGCTCAAATAATGGCCTTTAGACGACTAAAGCGTGGTGAAGGCTCACTTCCTCCGGATGTTATTAGGGCAATTATTCCGCCTCCTCTTTTTTCTCAGCAAGGTCAAGTTGGTCTGGAGGCCACTTCTAATGAGAAGGCTTTTGGTCAACAAGCCGTAGATCAACCAAGGGTAGTAGAGAGCAATGACAGAGTACAACAGTTTGTGCCTCCAAATAAAGGGCAAATTGTGGTTAAAGAGGAAAGAGATGTGAAAGAGTCCCCTATGGTTGAAGAGAGGAAACCTGTGCCCAATACATTTCCAGGGATACCAGTTGCTGCAAAGGAAGGTTCACCAACGGTGGTTTCTGCAAAGGAAGAAAAAATCAATAAAGCTGTAGTGAAAATTGAACAAGAAGCTGAACAAGTCACGCAGGCTAAAGCTTCTGCAACAAATGGTTTGACTGCAGAAAGCAATAAGGTTGTTCCTTCAAAATCTCCTCCAGATACTTCTGCCCAGGTCAAGAAGCATCCTCTAGGAAATCCTGGACAACCTTCTAAGGACATGAACATTATAAGGAAGTATCATGGTCCTCTTTTTGACTTTCCTCCATATGGAAAGAAGTCAAATTCTCTTTTGTCAAATACATTGCATGCTGGTAACAGTGCAACTTCATTATCTATAGGATATGATGTTAAAGATTTGTTATTTGAGGAGGGAATGGATGTTCTCAACAAAAAAAGGACTGAGAGTCTGAAAAAGATAGAGCGATTGCTGGCAGTAAAACTAGATAGGAAACGAATCAGACCTGATCTTGTATTAAAGCTACAAATAGAGGAGCGGAAGCTGCGTCTTCTAGATCTCCAGGCTAGAGTAAGAGATGAAGTTGATCAACAGCAGCAGGAAATAATGGCGATGTCTGATAGGCCATATCGTAAATTTGTGCGCCTCTGTGAACGCCAACGGGCAGATCTAGCAAGACAAGTTCAACTTTCCCAAAAGGCAATAAAAGAGAAACAATTGAAAGCCGTGTTTCAATGGCGCAAAAGGTTACTCGAAGCACATTGGGCGATTCGTGATGCCAGAACTGCTCGCAACAGAGGAGTTGCTAAATATCATGAGAAGATGTTAAAGGAGTTTTCTAAAAGGAAAGATGAAGATCGGAATAAGAGAATGGATGCCTTGAAAAATAATGATGTTGACAGGTATCGTCAAATGTTGTTAGAACAGCAAAATCAGATTCCTGGTGATGCTCAAGAGCGTTATCTGGTTCTCTCTTCTTTCTTGTCACAAACAGAAGAGTATTTGCACAAACTTGGAGGAAAAATTACAGCTGTAAAGAACAATCAAGAGGTTGAAGAAGCAGAAATTACTGCAGCAGCAGCGGCAAGAGCACAGGGTCTATCAGAAGAGGAGGCTGCAGCAGCAGCAGCTTGTGCAGCACAGGAGGTCGTGACAAGAAATAAGTTCTCAGAAATGAGTGCTTCTAGGAACAATATGTCAGTAAACAAGTACTATAACTTGGCACATGCTGTAAATGAGAAGATCATTAGACAACCATCCATGCTGCGGGCCGGAACTTTGAGAGATTATCAGCTTGTTGGGTTGCAATGGATGCTTTCCTTGTATAACAATAAATTAAATGGAATTCTTGCAGATGAAATGGGACTTGGGAAGACTGTACAGGTAATGGCCTTGATAGCTTATCTTATGGTAGTTCAAGGGAAATTATGGTCCTCATCTCATAATTGTGCCAAATGCTGTCATGGTCAACTGGAAGAGTGAGTTACATAATTGGCTTCCTACATTATCCTGTATTTATTATGTTGGTGGGAAAGATCAACGTACAAAATTGTATTCTCAGGAAGTTGCTGCAATGAAGTTTAATGTACTGGTCACTACATATGAGTTTGTTATGCGAGATCGGGCAAAGCTTTCTAAAGTAGACTGGAAATATATCATAATCGATGAGGCACAGCGCATGAAAGACAGAGATTCACGCCTTTCACGTGATTTAGATAAGTTTCGATGTCAAAGACGGCTGCTTCTTACAGGGACACCATTGCAGAATGATTTGCAGGAACTATGGTCTCTTTTGAACTTGCTTCTACCTGAGGTATTTGACAATCGCAAAGCTTTCCATGACTGGTTCTCAAAACCCTTTCAAAAGGACGGGCCTTCTTCCCAATCCCCTGAAGACGATTGGCTTGAAACTGAGAAGAAAGTGATTATAATTCACAGGTTGCACCAGATATTGGAACCTTTTATGCTTCGTCGTCGGGTTGAAGATGTAGAGGGATCACTACCACAGAAGGTTTCAGTGGTATTGAAATGTAAAATGTCAGCCCTTCAAGGTGCTATTTATGATTGGATCAAAGCAACAGGCAGTATTAGGCTTGATCCCCAGATAGAGGCCAGGAGAGTATTAGGCAATTCCAAAAGACAGATTAGAGCATATGTTCCACTGCAGAACAGGTGTATGGAGCTGCGAAAGGTTTGCAACCATCCTTTACTAAGTTATCCTTACCTTATCGACTATTCTAATGAGTATGTTGTGCGATCATGTGGAAAACTTTGGGTTCTGGATAGAGTTCTCATCAAACTCCACAAAGCAGGACATCGTGTCCTCCTTTTCAGTACAATGACAAAGTTGCTGGATATATTGGAAGATTACCTGCAATGGCGCCGTCTTCATTATAGAAGGATTGATGGAACAACTAGCTTAGATGATAGAGAATCGGCTATTCATGATTTTAATAAGCCTGGTTCTGAATGTTTCCTATTCTTACTTAGTATCCGTGCAGCAGGAAGGGGTTTGAATCTTCAATCAGCAGACACAGTGGTCATATATGATCCTGACCCAAACCCAAAAAATGAAGAGCAGGCTGTAGCTAGGGCTCATAGAATTGGTCAGAAGAGAGAGGTCAGAGTTATATACTTAGAAGCTGTTGTAGAAACAATATCAAGCTACCAGAAAGAAGATGAACTCAGAACTGGGGGAACAATAGATGATGAGGATGATCTTGCTGGTAAAGATCGATATATGGGTTCTGTGGAGAGCCTTGTTCGTAACAACATTCAACAGTATAAAATTGATATGGCAGATGAGGTCATAAATGCAGGTCGTTTTGATCAAAGGACAACACAAGAAGAGAGGCGTATGACATTAGAGACTCTTTTACATGATGAAGAGAGGTACCAAGAAACAGTTCATAATGTCCCTTCAATGCAGGAAGTAAATCGTTTAATTGCTAGAAGCAAAGAAGAACTGGAGCTGTTTGACCGGATGGATGAGGAGATTGACTGGCCTGGTGAGATGATGAAGCACCTACAGATTCCTAAGTGGCTACGTGTGGGCTCAAGAGAGGTCAGTGCTGCTCAAGATGCTATGTCTAAGCAGGCGTTAAGTAGGGGTTTTGTGGTACCTATTGGTACTAAAGAAGAAGAAGATAAATTATGTGCAATGCCCCCTATAACCATTCCGGAGAAGAAATCAGCCAATATAGAAAATGCTTCCAATCGAAAACCCTCTAAAGCTTCATCTAGTAACAAAAAACAGCTACCTAATAAACACAGAGGCATGCAATCTGTTGATGAAGGGGACGAGGAAATTGAAGTAAGTACGGAAGAGAAAGATGGTTCTTCTACACATGAAGAAGAGGGAGAAATAAAAGAAGATTTAGAAGATGAAGAAAACAGCAGGGCGGCTGATCTAGTGCTTAATGATAGAGTTCAGTCTGAAGAAGGTCAACTAGAATCCGATGGAGGTGAGGATGACGAAACTAGGGCCACAGAAGTTATGGAGAATGTTGTTAGAGGGGGCAATGAAGGCGAGGCTGCTTCATCAGAATCTTCATTTCGGAATGGAAAAGTGAATGTAGGACAGGTTTCTTCGCCGACGGTGTCTGCTCAAAAATTTGGATCTTTGGCTGCACTAGAAGCCAAACCTACAACCCAACCAAAGCCAGTGGTGGAAGAGCTGGAGGAAGGTGAAATTGTTGCATCTGGTGATTCTCACATGGAGTTCCAACAATCAGGAAGTTGGGTGCATGAGAGGGAAGACGGTGAAGAGGAACAAGTTTTGCAACCAAAAACCAAGCGAAAGCGCAGTATGCGCACTCGCCCTCGACCCCTTTCAGAAAAGTTAGAAGAGAAGCCTATTTCCGAAAAACAAGTGCATCACTCAATGACTTTCTACCAGCAAAATTCTAATCAGACACGTTACGATTATGGGCGACATGTGGGACCTAATAAAGATGTTGGAGCTGTCAGTGATGCAGCCTATGACAAGCCTGATCACTGGAGTGCAAATCTCAAGAGGAGAGAGGTTATTCAATCAAGAGTTGAGGATACTTTGTTAGAAACATTACCAGTGTCAAAGCAACGTGTCCTGCTTAAGCATAACAGACCGAATGGATATATTGAACCTCTTCAGGATGCTACAGAATATCCAAGAGAAAGATGGGATCCAAAATTCATTCACTCTGGTGTATCTTCAAGCTGTATTGGAGGTGGACACATCTCTGATATCACACAGAAAAAGTGTAAGAATGTTTTTACTAGATTGCAAGGAACAGTCAAGGAAGGACGACACACAGCACTGGTTGTGGAGATTCCAAAAAGAAATGAGAATCCAACTTACTATAGGGTTATAGAGAACCCTATAGATGCTCGAACAATAGAACAACGTCTTGACCGCTTTTTATATGGGAGTGTTCTTGACTTTGCTGCAGATGTGCAGTTGATGCTGGAGAATGCTATACGTTTTTATGGTCATTCTAATGAGGTCAAGACAAATTTAAGGAGGCTTCAAGCTCTCTTCTTCCAGCGTATGGCTGATTCCTTCCCAGATGATAATTTTAGTTCCTTTAAAACTCGAAGCTTGGTTGCTCTTGGTCAAACTGCAAATTCATCTACATCATCCCCTAAGCAACAACCGATTCAATCTAGACTGCTTAAGCCACAAGATGATTTCATTCTAGCCTCTGACTCAGGTCCAGCAAAGCACTCGCAACGGAGCTTCAATGCTGTTGATGATGATATGAGGGAGAAAGCTAGTCAGAAAGAAAACATTTCTAAGATGCCGAAAGAAGCTAGGGCCATGTTTGGTGATCGAGCACAGAACAGGGAAAGATGTAGGGGAGATGAAGTAGATGAAGTAACTCACCCTGGTGATCTTGTTATCTGCAAAAAGAAGAGGAAAGATAGGGATAAAGTAATAGCGAAAGCTAGGATGGTTAATTGCTCACCCGATATTTGTCAGGGTACAAGAAATTTGCCCCAGAAGGATATCTTGATTCCCGGGCAAACTAGACAGGTCCAAGGATGGCCTCAGTTTGCTAGTGCTGAGAAGACCGGTACTAGTGGACTTGATGCTGAGAAGGATGATGCTCAGTGGGCTAGACCAGTTAAGAGGATGAGGACAGATAAGAGGAGGCCCAGTCATATTTGATTCTGTAAATATTGAAGTCATTTATTGGGGTGTTTGCATATCCTTTTACTGGAAATCTTCACCATTGTTGCAAGTTGTAATCTTAGTGCATGTTCGGCAAAGTGCTCTTGATTTAGAGTTTCCCATTGTAAAGTATGTGTTATAGTCTTATAGAGGTTATGAAAACTAACCTATTATCATTCAATTCCTAATGTCACATTCAATGATCCCCGAGATAATGGATAACGTCTCCTTAATATTCTATAGTTGCTCAATATTTGTCTCTGATTTGTGAATCTGGCAGCCTAGTGAGAGCTGTCTCATCTGTGTTTTTTAATTAATTCTTTGCTTATTAACTATC

Ace file of the UniGene sp_v3.0_unigene1753

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO	-	-	0.0	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	41%
Sma3	SNF2 super family	-	-	5.128e-13	-

Source	ECs	Term	Type	e value	Identity
Sma3	Hydrolases, Acting on acid anhydrides, In phosphorous-containing anhydrides.	EC:3.6.1.-	-	8.264e-06	-

Source	KEGGs	Term	e value	Identity
Sma3	Purine metabolism	00230	8.264e-06	%
Sma3	Lipopolysaccharide biosynthesis	00540	8.264e-06	%
Sma3	Folate biosynthesis	00790	8.264e-06	%
Sma3	Metabolic pathways	01100	8.264e-06	%

Source	Gene names
Sma3	At2g28290; At2g46020; At3g06400; At5g18620; B1329D01.23; BRM; CHR1520; CHR1522; CHR1527; CHR1529; CHR1530; CHR1534; CHR3504; CHR3508; CHR915; CHR958; F24P17.13; GSVIVT00019937001; GSVIVT00026891001; LOC_Os01g27040; MICPUCDRAFT_28265; MICPUCDRAFT_60694; MI

Source	GOs	Term	Type	Identity
Sma3	nucleus	GO:0005634	Cellular Component	-
Sma3	chromatin remodeling complex	GO:0016585	Cellular Component	-
Sma3	DNA binding	GO:0003677	Molecular Function	-
Sma3	chromatin binding	GO:0003682	Molecular Function	-
Sma3	helicase activity	GO:0004386	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	nucleosome binding	GO:0031491	Molecular Function	-
Sma3	regulation of transcription, DNA-dependent	GO:0006355	Biological Process	-
Sma3	embryo sac development	GO:0009553	Biological Process	-
Sma3	response to wounding	GO:0009611	Biological Process	-
Sma3	flower development	GO:0009908	Biological Process	-
Sma3	organ boundary specification between lateral organs and the meristem	GO:0010199	Biological Process	-
Sma3	cell growth	GO:0016049	Biological Process	-
Sma3	regulation of gene expression, epigenetic	GO:0040029	Biological Process	-
Sma3	ATP-dependent chromatin remodeling	GO:0043044	Biological Process	-
Sma3		GO:0045449	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	SNF2-related	IPR000330	-	-
Sma3	SANT/Myb domain	IPR001005	-	-
Sma3	Bromodomain	IPR001487	-	-
Sma3	Helicase, C-terminal	IPR001650	-	-
Sma3	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	IPR002464	-	-
Sma3	Helicase, superfamily 1/2, ATP-binding domain	IPR014001	-	-
Sma3	Helicase/SANT-associated, DNA binding	IPR014012	-	-
Sma3		IPR014021	-	-
Sma3		IPR014778	-	-
Sma3	Glutamine-Leucine-Glutamine, QLQ	IPR014978	-	-
Sma3	ATPase, nucleosome remodelling ISWI, HAND domain	IPR015194	-	-
Sma3	SLIDE domain	IPR015195	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	SANT domain	IPR017884	-	-
Sma3	AT hook, DNA-binding motif	IPR017956	-	-
Sma3	Bromodomain, conserved site	IPR018359	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT2G46020.2	CHR2, ATBRM, BRM, CHA2 transcription regulatory protein SNF2, putative chr2:18923304-18931769 FORWARD LENGTH=2193	51%
RefSeq	Arabidopsis thaliana	NP_973695.1	ATP-dependent helicase BRM [Arabidopsis thaliana]	51%
RefSeq	Populus trichocarpa	XP_002301364.1	chromatin remodeling complex subunit [Populus trichocarpa]	54%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: D5AD70

Fln msg: your sequence is longer than subject: 1229 - 377

Fln protein: MVNWKSELHNWLPTLSCIYYVGGKDQRTKLYSQEVAAMKFNVLVTTYEFVMRDRAKLSKVDWKYIIIDEAQRMKDRDSRLSRDLDKFRCQRRLLLTGTPLQNDLQELWSLLNLLLPEVFDNRKAFHDWFSKPFQKDGPSSQSPEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPQKVSVVLKCKMSALQGAIYDWIKATGSIRLDPQIEARRVLGNSKRQIRAYVPLQNRCMELRKVCNHPLLSYPYLIDYSNEYVVRSCGKLWVLDRVLIKLHKAGHRVLLFSTMTKLLDILEDYLQWRRLHYRRIDGTTSLDDRESAIHDFNKPGSECFLFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVIYLEAVVETISSYQKEDELRTGGTIDDEDDLAGKDRYMGSVESLVRNNIQQYKIDMADEVINAGRFDQRTTQEERRMTLETLLHDEERYQETVHNVPSMQEVNRLIARSKEELELFDRMDEEIDWPGEMMKHLQIPKWLRVGSREVSAAQDAMSKQALSRGFVVPIGTKEEEDKLCAMPPITIPEKKSANIENASNRKPSKASSSNKKQLPNKHRGMQSVDEGDEEIEVSTEEKDGSSTHEEEGEIKEDLEDEENSRAADLVLNDRVQSEEGQLESDGGEDDETRATEVMENVVRGGNEGEAASSESSFRNGKVNVGQVSSPTVSAQKFGSLAALEAKPTTQPKPVVEELEEGEIVASGDSHMEFQQSGSWVHEREDGEEEQVLQPKTKRKRSMRTRPRPLSEKLEEKPISEKQVHHSMTFYQQNSNQTRYDYGRHVGPNKDVGAVSDAAYDKPDHWSANLKRREVIQSRVEDTLLETLPVSKQRVLLKHNRPNGYIEPLQDATEYPRERWDPKFIHSGVSSSCIGGGHISDITQKKCKNVFTRLQGTVKEGRHTALVVEIPKRNENPTYYRVIENPIDARTIEQRLDRFLYGSVLDFAADVQLMLENAIRFYGHSNEVKTNLRRLQALFFQRMADSFPDDNFSSFKTRSLVALGQTANSSTSSPKQQPIQSRLLKPQDDFILASDSGPAKHSQRSFNAVDDDMREKASQKENISKMPKEARAMFGDRAQNRERCRGDEVDEVTHPGDLVICKKKRKDRDKVIAKARMVNCSPDICQGTRNLPQKDILIPGQTRQVQGWPQFASAEKTGTSGLDAEKDDAQWARPVKRMRTDKRRPSHI*

Protein Length: 1230

Fln nts: GTCACAAAATAATCTTCGCCAGTCTCTACAGCAGCAGCTTCTACGGAAATCTCAAGGAGATGAAGCTCTCCTGGCCTATCAAGCAGGTGGCCTTCAAGGTATTATGGGGGGTAGTAGTATCTGTGGGCCATCTGGCTCAATTCAATTGCCCCAGCACCCTAGAAATTTCATGGATATAGCTCAACAGCCACAGGTTGCTTCTCAAGTTCAAGATGAAGGGCAGGGCAAAGCTCAAAATCAGATGCATGCTCAAGCCTCCTATCTGCAGTACGCTCTTCAGGCTGCCCAGCATAAGGCTCGTGCTAATATTCAATCTCAGCAGCAGGGTAAAGGAGGTTTAATTGGTCCGTCTGTAGTAGACCCAGATCAACTTAATACTTTGAAGCTTCAAGAACTTATGAGGATGCAGGCAGCAAGCCAGGCACAAGCATCTATGTTTAAGAAGTCACCTGGTCAGCTTGTACAGATGGAGAAGCATATGGAGCAAGGACAGACTAGCAATGACTTGAGAAGTGAAATGAAGTCCCAGCAGGCACAGATGGCTCAGTTATCAGGTAACATGGGAAGACCAGGGCAAGGGCTGCAAAATCAACATCCAATGCAAAATCTTGCAAACAGCCAGTATGCTAATATTGCTCACATACAAGCTCTTCAGGCTTGGGCCTTGGATAAGAATATAGATATTTCATCTCCTGCAAATGCACATCTTATTCCTCAACTTTTGCTCCAGTTTCAAGCTCGTTTAGTGGCAATGCAGAAAGCTAATGATGGTAATCATGCTGCACATCAGACTCATATGTTGCCAGCAAAAGCACATATTGCTTCTTCATCATCAGTCCAGGATTATGCGGGACCCAGCAATGGAAATGTTGGACATGGAAACTCTGTCCCCAAAGGGCATGTTGTTCAAGGGGGTTTGTATCCAAAACCAAGGCCAGCAGTTACAACTGGAACAGTACCAGCAACTGGATATCCAGCAATGAGTAATTCTACTGCTGTTCAGACACAACACCCCATTTCCCAAGGTGGAGATTATCAGATTGATCGGGCAGATAGGCATCAGAATTCTTCTGCGTGTACGATGGCTTCTATGCACGGGATTTCCTCCTCAGCTACTGCTGTGACTCAGATAGGAGATGCTTCAGTTGGAAAGAACATGCAGGTTTCTCCAGAGTCATTACAGATGCAATTCTACAGGCAGCAGCTTCAATCAAACAGATCTTCCTTACACCCAGCAGGTTCAAATGAAGTATCAACATCAAACCCTATTGCAAATCCACAAGTTAATCATTCAGGACCAGTGCAACATCAACAGTATGGCTTTACAAGGCAGCAATTGCATGTTCTTAAAGCTCAAATAATGGCCTTTAGACGACTAAAGCGTGGTGAAGGCTCACTTCCTCCGGATGTTATTAGGGCAATTATTCCGCCTCCTCTTTTTTCTCAGCAAGGTCAAGTTGGTCTGGAGGCCACTTCTAATGAGAAGGCTTTTGGTCAACAAGCCGTAGATCAACCAAGGGTAGTAGAGAGCAATGACAGAGTACAACAGTTTGTGCCTCCAAATAAAGGGCAAATTGTGGTTAAAGAGGAAAGAGATGTGAAAGAGTCCCCTATGGTTGAAGAGAGGAAACCTGTGCCCAATACATTTCCAGGGATACCAGTTGCTGCAAAGGAAGGTTCACCAACGGTGGTTTCTGCAAAGGAAGAAAAAATCAATAAAGCTGTAGTGAAAATTGAACAAGAAGCTGAACAAGTCACGCAGGCTAAAGCTTCTGCAACAAATGGTTTGACTGCAGAAAGCAATAAGGTTGTTCCTTCAAAATCTCCTCCAGATACTTCTGCCCAGGTCAAGAAGCATCCTCTAGGAAATCCTGGACAACCTTCTAAGGACATGAACATTATAAGGAAGTATCATGGTCCTCTTTTTGACTTTCCTCCATATGGAAAGAAGTCAAATTCTCTTTTGTCAAATACATTGCATGCTGGTAACAGTGCAACTTCATTATCTATAGGATATGATGTTAAAGATTTGTTATTTGAGGAGGGAATGGATGTTCTCAACAAAAAAAGGACTGAGAGTCTGAAAAAGATAGAGCGATTGCTGGCAGTAAAACTAGATAGGAAACGAATCAGACCTGATCTTGTATTAAAGCTACAAATAGAGGAGCGGAAGCTGCGTCTTCTAGATCTCCAGGCTAGAGTAAGAGATGAAGTTGATCAACAGCAGCAGGAAATAATGGCGATGTCTGATAGGCCATATCGTAAATTTGTGCGCCTCTGTGAACGCCAACGGGCAGATCTAGCAAGACAAGTTCAACTTTCCCAAAAGGCAATAAAAGAGAAACAATTGAAAGCCGTGTTTCAATGGCGCAAAAGGTTACTCGAAGCACATTGGGCGATTCGTGATGCCAGAACTGCTCGCAACAGAGGAGTTGCTAAATATCATGAGAAGATGTTAAAGGAGTTTTCTAAAAGGAAAGATGAAGATCGGAATAAGAGAATGGATGCCTTGAAAAATAATGATGTTGACAGGTATCGTCAAATGTTGTTAGAACAGCAAAATCAGATTCCTGGTGATGCTCAAGAGCGTTATCTGGTTCTCTCTTCTTTCTTGTCACAAACAGAAGAGTATTTGCACAAACTTGGAGGAAAAATTACAGCTGTAAAGAACAATCAAGAGGTTGAAGAAGCAGAAATTACTGCAGCAGCAGCGGCAAGAGCACAGGGTCTATCAGAAGAGGAGGCTGCAGCAGCAGCAGCTTGTGCAGCACAGGAGGTCGTGACAAGAAATAAGTTCTCAGAAATGAGTGCTTCTAGGAACAATATGTCAGTAAACAAGTACTATAACTTGGCACATGCTGTAAATGAGAAGATCATTAGACAACCATCCATGCTGCGGGCCGGAACTTTGAGAGATTATCAGCTTGTTGGGTTGCAATGGATGCTTTCCTTGTATAACAATAAATTAAATGGAATTCTTGCAGATGAAATGGGACTTGGGAAGACTGTACAGGTAATGGCCTTGATAGCTTATCTTATGGTAGTTCAAGGGAAATTATGGTCCTCATCTCATAATTGTGCCAAATGCTGTC_-_ATGGTCAACTGGAAGAGTGAGTTACATAATTGGCTTCCTACATTATCCTGTATTTATTATGTTGGTGGGAAAGATCAACGTACAAAATTGTATTCTCAGGAAGTTGCTGCAATGAAGTTTAATGTACTGGTCACTACATATGAGTTTGTTATGCGAGATCGGGCAAAGCTTTCTAAAGTAGACTGGAAATATATCATAATCGATGAGGCACAGCGCATGAAAGACAGAGATTCACGCCTTTCACGTGATTTAGATAAGTTTCGATGTCAAAGACGGCTGCTTCTTACAGGGACACCATTGCAGAATGATTTGCAGGAACTATGGTCTCTTTTGAACTTGCTTCTACCTGAGGTATTTGACAATCGCAAAGCTTTCCATGACTGGTTCTCAAAACCCTTTCAAAAGGACGGGCCTTCTTCCCAATCCCCTGAAGACGATTGGCTTGAAACTGAGAAGAAAGTGATTATAATTCACAGGTTGCACCAGATATTGGAACCTTTTATGCTTCGTCGTCGGGTTGAAGATGTAGAGGGATCACTACCACAGAAGGTTTCAGTGGTATTGAAATGTAAAATGTCAGCCCTTCAAGGTGCTATTTATGATTGGATCAAAGCAACAGGCAGTATTAGGCTTGATCCCCAGATAGAGGCCAGGAGAGTATTAGGCAATTCCAAAAGACAGATTAGAGCATATGTTCCACTGCAGAACAGGTGTATGGAGCTGCGAAAGGTTTGCAACCATCCTTTACTAAGTTATCCTTACCTTATCGACTATTCTAATGAGTATGTTGTGCGATCATGTGGAAAACTTTGGGTTCTGGATAGAGTTCTCATCAAACTCCACAAAGCAGGACATCGTGTCCTCCTTTTCAGTACAATGACAAAGTTGCTGGATATATTGGAAGATTACCTGCAATGGCGCCGTCTTCATTATAGAAGGATTGATGGAACAACTAGCTTAGATGATAGAGAATCGGCTATTCATGATTTTAATAAGCCTGGTTCTGAATGTTTCCTATTCTTACTTAGTATCCGTGCAGCAGGAAGGGGTTTGAATCTTCAATCAGCAGACACAGTGGTCATATATGATCCTGACCCAAACCCAAAAAATGAAGAGCAGGCTGTAGCTAGGGCTCATAGAATTGGTCAGAAGAGAGAGGTCAGAGTTATATACTTAGAAGCTGTTGTAGAAACAATATCAAGCTACCAGAAAGAAGATGAACTCAGAACTGGGGGAACAATAGATGATGAGGATGATCTTGCTGGTAAAGATCGATATATGGGTTCTGTGGAGAGCCTTGTTCGTAACAACATTCAACAGTATAAAATTGATATGGCAGATGAGGTCATAAATGCAGGTCGTTTTGATCAAAGGACAACACAAGAAGAGAGGCGTATGACATTAGAGACTCTTTTACATGATGAAGAGAGGTACCAAGAAACAGTTCATAATGTCCCTTCAATGCAGGAAGTAAATCGTTTAATTGCTAGAAGCAAAGAAGAACTGGAGCTGTTTGACCGGATGGATGAGGAGATTGACTGGCCTGGTGAGATGATGAAGCACCTACAGATTCCTAAGTGGCTACGTGTGGGCTCAAGAGAGGTCAGTGCTGCTCAAGATGCTATGTCTAAGCAGGCGTTAAGTAGGGGTTTTGTGGTACCTATTGGTACTAAAGAAGAAGAAGATAAATTATGTGCAATGCCCCCTATAACCATTCCGGAGAAGAAATCAGCCAATATAGAAAATGCTTCCAATCGAAAACCCTCTAAAGCTTCATCTAGTAACAAAAAACAGCTACCTAATAAACACAGAGGCATGCAATCTGTTGATGAAGGGGACGAGGAAATTGAAGTAAGTACGGAAGAGAAAGATGGTTCTTCTACACATGAAGAAGAGGGAGAAATAAAAGAAGATTTAGAAGATGAAGAAAACAGCAGGGCGGCTGATCTAGTGCTTAATGATAGAGTTCAGTCTGAAGAAGGTCAACTAGAATCCGATGGAGGTGAGGATGACGAAACTAGGGCCACAGAAGTTATGGAGAATGTTGTTAGAGGGGGCAATGAAGGCGAGGCTGCTTCATCAGAATCTTCATTTCGGAATGGAAAAGTGAATGTAGGACAGGTTTCTTCGCCGACGGTGTCTGCTCAAAAATTTGGATCTTTGGCTGCACTAGAAGCCAAACCTACAACCCAACCAAAGCCAGTGGTGGAAGAGCTGGAGGAAGGTGAAATTGTTGCATCTGGTGATTCTCACATGGAGTTCCAACAATCAGGAAGTTGGGTGCATGAGAGGGAAGACGGTGAAGAGGAACAAGTTTTGCAACCAAAAACCAAGCGAAAGCGCAGTATGCGCACTCGCCCTCGACCCCTTTCAGAAAAGTTAGAAGAGAAGCCTATTTCCGAAAAACAAGTGCATCACTCAATGACTTTCTACCAGCAAAATTCTAATCAGACACGTTACGATTATGGGCGACATGTGGGACCTAATAAAGATGTTGGAGCTGTCAGTGATGCAGCCTATGACAAGCCTGATCACTGGAGTGCAAATCTCAAGAGGAGAGAGGTTATTCAATCAAGAGTTGAGGATACTTTGTTAGAAACATTACCAGTGTCAAAGCAACGTGTCCTGCTTAAGCATAACAGACCGAATGGATATATTGAACCTCTTCAGGATGCTACAGAATATCCAAGAGAAAGATGGGATCCAAAATTCATTCACTCTGGTGTATCTTCAAGCTGTATTGGAGGTGGACACATCTCTGATATCACACAGAAAAAGTGTAAGAATGTTTTTACTAGATTGCAAGGAACAGTCAAGGAAGGACGACACACAGCACTGGTTGTGGAGATTCCAAAAAGAAATGAGAATCCAACTTACTATAGGGTTATAGAGAACCCTATAGATGCTCGAACAATAGAACAACGTCTTGACCGCTTTTTATATGGGAGTGTTCTTGACTTTGCTGCAGATGTGCAGTTGATGCTGGAGAATGCTATACGTTTTTATGGTCATTCTAATGAGGTCAAGACAAATTTAAGGAGGCTTCAAGCTCTCTTCTTCCAGCGTATGGCTGATTCCTTCCCAGATGATAATTTTAGTTCCTTTAAAACTCGAAGCTTGGTTGCTCTTGGTCAAACTGCAAATTCATCTACATCATCCCCTAAGCAACAACCGATTCAATCTAGACTGCTTAAGCCACAAGATGATTTCATTCTAGCCTCTGACTCAGGTCCAGCAAAGCACTCGCAACGGAGCTTCAATGCTGTTGATGATGATATGAGGGAGAAAGCTAGTCAGAAAGAAAACATTTCTAAGATGCCGAAAGAAGCTAGGGCCATGTTTGGTGATCGAGCACAGAACAGGGAAAGATGTAGGGGAGATGAAGTAGATGAAGTAACTCACCCTGGTGATCTTGTTATCTGCAAAAAGAAGAGGAAAGATAGGGATAAAGTAATAGCGAAAGCTAGGATGGTTAATTGCTCACCCGATATTTGTCAGGGTACAAGAAATTTGCCCCAGAAGGATATCTTGATTCCCGGGCAAACTAGACAGGTCCAAGGATGGCCTCAGTTTGCTAGTGCTGAGAAGACCGGTACTAGTGGACTTGATGCTGAGAAGGATGATGCTCAGTGGGCTAGACCAGTTAAGAGGATGAGGACAGATAAGAGGAGGCCCAGTCATATTTGA___TTCTGTAAATATTGAAGTCATTTATTGGGGTGTTTGCATATCCTTTTACTGGAAATCTTCACCATTGTTGCAAGTTGTAATCTTAGTGCATGTTCGGCAAAGTGCTCTTGATTTAGAGTTTCCCATTGTAAAGTATGTGTTATAGTCTTATAGAGGTTATGAAAACTAACCTATTATCATTCAATTCCTAATGTCACATTCAATGATCCCCGAGATAATGGATAACGTCTCCTTAATATTCTATAGTTGCTCAATATTTGTCTCTGATTTGTGAATCTGGCAGCCTAGTGAGAGCTGTCTCATCTGTGTTTTTTAATTAATTCTTTGCTTATTAACTATC

Fln Alignment:

Contig1753___ETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPQKVSVVLKCKMSALQGAIYDWIKATGSIRLDPQIEARRVLGNSKRQIRAYVPLQNRCMELRKVCNHP-LLSYPYLIDYSN---EYVVRSCGKLWVLDRVLIKLHKAGHRVLLFSTMTKLLDILEDYLQWRRLHYRRIDGTTSLDDRESAIHDFNKPGSECFLFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVIYL
D5AD70______________EDKKKVQVISKLHAILRPFLLRRLKEDVEKNLPSKKEIILYARMTEDQRKIQEHLLNKSLITY---LHARSEYGKAMK-----TRLENLMLQLRKNFNHPDLLQSQFEISYHYPPVEKLMEQCGKFQLLDRLLKHLRARNHKVLIFSQWTRVLDLLDYCLSESGHDMCRIDGSVKLHDRQRQIKDFNDPNSNLHIFLLSTRAGGLGINLTAADTCIIYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL

SNPs (tot: 46)

Position	A %	C %	G %	T %	Probability
2117			87	12	0.992554
2118	87		12		0.992554
2119			12	87	0.992554
2120	87		12		0.992554
2349	16			83	0.994512
2350		16	83		0.994512
2352	83			16	0.994512
2353	83			16	0.994512
2428	75		25		0.996473
2449	25		75		0.996473
2450	75	25			0.996473
2452			75	25	0.996473
2453	75			25	0.996473
2525	33		66		0.997452
2530		66		33	0.997452
2531	66		33		0.997452
2596	20		80		0.995493
3721		14	85		0.993533
3871	87		12		0.992554
3872	87			12	0.992554
3873	14			14	0.984337
3874			14	14	0.984337
4132	10	90			0.90298
4135		90		10	0.90298
4191		88		11	0.923564
4280		11		88	0.923564
4396	12			87	0.992554
4398		87	12		0.992554
4400			12	87	0.992554
4466	90			10	0.90298
4467	90		10		0.90298
4589		90		10	0.90298
4970		16		83	0.994512
4985	85		14		0.993533
5036	14		85		0.993533
5047		28		71	1.0
5084	83			16	0.994512
6404		10		90	0.90298
6412		10		90	0.90298
6471	11		88		0.923564
6523	88			11	0.923564
6525	77		11		0.968132
6526	88		11		0.923564
6554		11	88		0.923564
7022	2	4		93	0.983471
7033		6		90	0.997073

SSRs (tot: 2)

Start position	End position	Sequence	Length
2747	2760	GCA GCA GCA GCA GC	14
4765	4777	AAG AAG AAG AAG A	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain