SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene1296

Length: 3916 nt

UniGene Fasta

>sp_v3.0_unigene1296
ACCGTCTCTCGTCAGCATAATCATGAACAGACACTGCGAAGCACAGAGCTAGAGCAGAAGCTCCGATCCACCCTGCAAAATCCCATGAAAGCCCACCCGATTTTTCAGCAATCTCCAGATTTTCCAAAATGATGACGGAGGATGACTATCTATACCCTGCAGGGTCCGCCATGAGAGTTCTTCCCCGGGGGAGCACCATGGCGGCCTCTGCAGAAGAAAACCAGTCAACGACAGACCCCTACCGCTCCTCCTCGCCGCTAAACCGATCGGAGAAAGCCCGATCCGGCGAGCCGCGCTTCTCCCCCTCGGCCTCCTTTGCCTACAACGCCCGAATCGCCATTGCCCTCGGTCCCTGCGCAGCCCTCCTGATAGAAATGGGCGGTATTCCAGTAATGGCGACTTTGACGGTCGGGCTTATGGTCTCCTACATCCTCGACTCCTTGCAGCTCAAGCAAGGCGCCTTCTTCGGCATCTGGTCGACCCTGCTAGTCTCGCAGTTGGCGTTCGTGCTCGGGGGTTCAACTCTCTCTGCCATAGATTCCTGGCCGCTGTACATACTTGCCGTGCTCGTGTGCTGCGAGGCGAATTTTCTGATAGGTGTGTGGGCTTCGCTTCAATTCCGGTGGCTCCAGCTCGAGAATCCGTCCATAGTCGTAACCCTAGAGCGACTCCTGTTCGCCTGTATTCCATTCACAGCGTCGGTAATCTGGACGTGGGGGGCCGTGGCGGCCGTGGGAATGGATCACGCGCCCTATTATTTTATGACGATTCTCTGCATCTTCTACTGGCTGTATTCTCTGCCACGGCAGTCGTCTTTCAGGACCAAGGCCGAAAAACGATATGGCGGTCAGCTTGCAGACGAAGCCCTGATTCTTGGTCCACTCGAATGCACACTTCATACCCTAACTCTACTGTTTTTGCCTTTGTTGCTTTACATCGGATCTCATCATTCCGTCATTTTTTCTTCCATGGCCACTCTCTGCGACCTCTTCCTGCTTTTTTTTGTGCCCCTGCTGTTTCAATTATATGCGTCGGCTTTTGGCGCATTGTGGTACATTTCGAAGGATCCTGCTTCGCTTCAGCAGATTCGGATCGTCAATGGCGCAATTGCACTGTTGGTTGTGATTGTGTGTCTGGAAATCAGGGTTGTCTTTTACTCCTTCGGGCGATATTTGCACGTTGGGCCTCCCTGGAATTATGTGCTGGTGACAATTACCATGCTAGGAGGAGCATTGGCAGCAGGAGGTTATGGGATTGGTCTGGTTAACGATGCTTTTGGCTCGGCTGCATTTACTGGCTTGTCAATTTTGGTGGCTTCAACCGGGTCGATTGTCGTCGGCATACCACTCAAGTTCTTGCCCGCACCAATTGTTGCTGGTTTTTATATATCTCAGTTTTTCATCAAGAAGAACCTATCATCTTATTTCATATTTGTTGTCTCAGCAAGCTTGCCAATTGTATGGTTTGTTGTGCACAACTACTGGGATCTCAATATTTGGTTAGCTGGTATGGCACTCAGATCCGTTTGCAAGTTCATCATTGCAAGTGTTGTGCTGGCCATGGTGATTCCGGGCCTAGCGCTTCTTCCTCCAAAGGCTCGTGTTGTGACAGAATGCGGTCTTATAGTCCACACATTGCTAGTCTGCTATATTGAGAATCGATTATTTACCTATACTAGCATCTATTACTTTGGTTTTGATGATGATGTTATTTACCCCAGTTACATGGTTATCACAACGACAGTTTTAGGTTTGGCTTTGGTCAGAAGATTGGCCTTGGACAATCGAATTGGTCCCAAGGCAGTTTGGATTTTGACGTGCTTGTACGCAGCAAAATTGTCAATGCTTGTTCTCACTTCAAAGACTGTTCTGTGGGCTACTGTCATCCTATTGTTGGCTGTGTCTCCTCCATTGCTTCTTTACAAAGACAAGGGTAAAACAGCTTCAAGAATGAAACCATGGCAAGGTTTTTCACATGCTGTTGTTGTTACTGTATCTGTCTGTTACTGTCGGCAAACAATCTTTGAAGCTCTCCAGTGGTGGAATGGAAGACCACCATCAGATGGTCTGCTTTTGGGATTTATTGTACTGTTATCAGGCCTGGCATGTGTTCCAATTGTTGCACGGCATTTCTCCCACATTCAGTTAGTGAAGCGCGTGCTACTTCTGGTGGTGTCTGTTGGTGTCTTGCTTATATTTATGCAGCCTCCATTACCAGAGACATGGTCATTTCAATCTAAATTGATGTACATACCTGAGCAGTCTATGGATGATAGTTCCATCTATGGTTCAATCACCAAGAAACCGTCCTGGCCATCGTGGTTACTTATAGCAACAATTATTGCTTCATTGGCTGCATTCACCAAAACTATTCCAGTGCAGTACATTGTAGAGCTTAGACTACTATACGCTGTGGTTGTGGGGATCACGTTTGGCATCTACATCTGTGCTGAGTTCTTTATTCAAACTCCCATTCTACATGCCTTGCTTGTTGGAGCTATGACATGCGCATCTGTCTTTGTGGTCTTTACACACTTTCCTTCGACATCAAGCCTGAGGTTTTTACCCTGGGTGTTTGCACTCCTCGTTGCACTTCTACCTGTTATGTATTTGTTGGAAGGTCAGTTGAGGTTAGCGAATGCGGAAAATGGAGAAGATGAGAGGTTTGTTGCACTGTTAACCCTTGAAGGGGCTCGGATATCTTTGTTGGGATTGTATGCTGCAATTTTCATGTTGATAGCGTTGGAAATAAAGATTGAGTTGGCATCATTGATGAAGGAGAAAGCTTTAGAGAAAGGAAGAGTGCAAAATTTATCAACTAAGAGCTCTGGTTTTGTTCCAAAGTATCGTCTACTTCAACAACGTCGAGCATCCGTGGCATCTTCTTTCACGGTAAAGAAGCTAGCTGCAGAAGGGGCATGGATGCCTTCAGTTGGCAATGTTGCAACTATGCTGTGTTTCTTGATCTCATTGATTCTGAATGTCCATTTGACTGGGGGCTCCGATAGGGCAATTTTTATTCTGGTACCAATATTGCTGCTGCTCAACCATGACTCTAACTTTTCTACGGGTTTTGGAGATAGACAACGATATTTTCCTTTGACTGCAGTTCTCTCCTTATATTTAGTAGCATCTGCCATATACAGATTGTGGGATGAAGTATGGCATGGATATTCTTCTTGGGGACTTGACGTCGGAGGTCCAGGTTGGTTCTTTGCTGTAAAAAATGCAGCTTTATTGATGCTAACATTACCTAATCATGTGCTATTCAATCGCTTTATGTGGGATTATGCAAGACAGTCAGATCTAATATTGTTAATGATCATGCCCCTCAATTTGCCTTCAGTCGTGATGGCTGATATAATAACTATTAAAGTTTTGGCATTGTTAGGCATTATATACGCTTTAGTCCAGTATTTGGTATCAAGGCATATACGAATCAAGGGAATGAAGTTCATTTGACAAGACTGATGAGTTGTAATGAGGATTTTTGTGGAACTCAGTTCCGTTCGGATTGTTTTATTGTTTACTGCATGATGGTGCCTTTTCTGTGGGCTGATGGCTCTCACAAAATAATTTAGCTTGATGTGTTTGACTTTTGATGGTTGGCGCAAATAAGCTGAATCAATGAGTTAGATGTGAGGAATAAGTATCTCTAAGTAAAGCTGTGGTAGATGCTTCTAGGTTGCAAAGTCAATTGATTTTCAACACCCCATTCTATGTCTCTAATCTGGGAATTTAAATTTTGTGATAGATAGGTTAGTCACATCAGGTCTATTTGGCATTCTTAATGCAGGATATAATGAGCTTGTTTTTCCAGAATCTGGTGACAAGCTGCCGTACTGTCCTTGATAGTTAGGCCACAAACAATGGCCTGTTAACTCAATTTGAATTGAAGGTTTTCTCTTTTCTTTTCC

Ace file of the UniGene sp_v3.0_unigene1296

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	no exine formation 1 [Arabidopsis thaliana] emb\|CAB87146.1\| putative protein [Arabidopsis thaliana] dbj\|BAD26730.1\| no exine formation-1 [Arabidopsis thaliana] gb\|AED91889.1\| no exine formation 1 [Arabidopsis thaliana]	-	-	0.0	49%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	62%

Source	Gene names
Sma3	At5g13390; GSVIVT00006219001; LOC_Os11g32470; MA4_111B14.44; MA4_111B14.46; Os11g0528200; OsI_36328; OsJ_34095; PHYPADRAFT_121066; POPTRDRAFT_554672; POPTRDRAFT_797216; RCOM_1438660; T22N19_40; VITISV_040923; nef1; orf265a;

Source	GOs	Term	Type	Identity
Sma3	mitochondrion	GO:0005739	Cellular Component	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	metabolic process	GO:0008152	Biological Process	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	0.0	-
Sma3	Lipocalin	IPR002345	-	0.0	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT5G13390.1	NEF1 no exine formation 1 chr5:4292809-4296572 FORWARD LENGTH=1123	56%
RefSeq	Arabidopsis thaliana	NP_196843.1	no exine formation 1 [Arabidopsis thaliana]	56%
RefSeq	Populus trichocarpa	XP_002303741.1	predicted protein [Populus trichocarpa]	58%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: D7TFK4

Fln msg:

Fln protein: MMTEDDYLYPAGSAMRVLPRGSTMAASAEENQSTTDPYRSSSPLNRSEKARSGEPRFSPSASFAYNARIAIALGPCAALLIEMGGIPVMATLTVGLMVSYILDSLQLKQGAFFGIWSTLLVSQLAFVLGGSTLSAIDSWPLYILAVLVCCEANFLIGVWASLQFRWLQLENPSIVVTLERLLFACIPFTASVIWTWGAVAAVGMDHAPYYFMTILCIFYWLYSLPRQSSFRTKAEKRYGGQLADEALILGPLECTLHTLTLLFLPLLLYIGSHHSVIFSSMATLCDLFLLFFVPLLFQLYASAFGALWYISKDPASLQQIRIVNGAIALLVVIVCLEIRVVFYSFGRYLHVGPPWNYVLVTITMLGGALAAGGYGIGLVNDAFGSAAFTGLSILVASTGSIVVGIPLKFLPAPIVAGFYISQFFIKKNLSSYFIFVVSASLPIVWFVVHNYWDLNIWLAGMALRSVCKFIIASVVLAMVIPGLALLPPKARVVTECGLIVHTLLVCYIENRLFTYTSIYYFGFDDDVIYPSYMVITTTVLGLALVRRLALDNRIGPKAVWILTCLYAAKLSMLVLTSKTVLWATVILLLAVSPPLLLYKDKGKTASRMKPWQGFSHAVVVTVSVCYCRQTIFEALQWWNGRPPSDGLLLGFIVLLSGLACVPIVARHFSHIQLVKRVLLLVVSVGVLLIFMQPPLPETWSFQSKLMYIPEQSMDDSSIYGSITKKPSWPSWLLIATIIASLAAFTKTIPVQYIVELRLLYAVVVGITFGIYICAEFFIQTPILHALLVGAMTCASVFVVFTHFPSTSSLRFLPWVFALLVALLPVMYLLEGQLRLANAENGEDERFVALLTLEGARISLLGLYAAIFMLIALEIKIELASLMKEKALEKGRVQNLSTKSSGFVPKYRLLQQRRASVASSFTVKKLAAEGAWMPSVGNVATMLCFLISLILNVHLTGGSDRAIFILVPILLLLNHDSNFSTGFGDRQRYFPLTAVLSLYLVASAIYRLWDEVWHGYSSWGLDVGGPGWFFAVKNAALLMLTLPNHVLFNRFMWDYARQSDLILLMIMPLNLPSVVMADIITIKVLALLGIIYALVQYLVSRHIRIKGMKFI*

Protein Length: 1112

Fln nts: ACCGTCTCTCGTCAGCATAATCATGAACAGACACTGCGAAGCACAGAGCTAGAGCAGAAGCTCCGATCCACCCTGCAAAATCCCATGAAAGCCCACCCGATTTTTCAGCAATCTCCAGATTTTCCAAA_-_ATGATGACGGAGGATGACTATCTATACCCTGCAGGGTCCGCCATGAGAGTTCTTCCCCGGGGGAGCACCATGGCGGCCTCTGCAGAAGAAAACCAGTCAACGACAGACCCCTACCGCTCCTCCTCGCCGCTAAACCGATCGGAGAAAGCCCGATCCGGCGAGCCGCGCTTCTCCCCCTCGGCCTCCTTTGCCTACAACGCCCGAATCGCCATTGCCCTCGGTCCCTGCGCAGCCCTCCTGATAGAAATGGGCGGTATTCCAGTAATGGCGACTTTGACGGTCGGGCTTATGGTCTCCTACATCCTCGACTCCTTGCAGCTCAAGCAAGGCGCCTTCTTCGGCATCTGGTCGACCCTGCTAGTCTCGCAGTTGGCGTTCGTGCTCGGGGGTTCAACTCTCTCTGCCATAGATTCCTGGCCGCTGTACATACTTGCCGTGCTCGTGTGCTGCGAGGCGAATTTTCTGATAGGTGTGTGGGCTTCGCTTCAATTCCGGTGGCTCCAGCTCGAGAATCCGTCCATAGTCGTAACCCTAGAGCGACTCCTGTTCGCCTGTATTCCATTCACAGCGTCGGTAATCTGGACGTGGGGGGCCGTGGCGGCCGTGGGAATGGATCACGCGCCCTATTATTTTATGACGATTCTCTGCATCTTCTACTGGCTGTATTCTCTGCCACGGCAGTCGTCTTTCAGGACCAAGGCCGAAAAACGATATGGCGGTCAGCTTGCAGACGAAGCCCTGATTCTTGGTCCACTCGAATGCACACTTCATACCCTAACTCTACTGTTTTTGCCTTTGTTGCTTTACATCGGATCTCATCATTCCGTCATTTTTTCTTCCATGGCCACTCTCTGCGACCTCTTCCTGCTTTTTTTTGTGCCCCTGCTGTTTCAATTATATGCGTCGGCTTTTGGCGCATTGTGGTACATTTCGAAGGATCCTGCTTCGCTTCAGCAGATTCGGATCGTCAATGGCGCAATTGCACTGTTGGTTGTGATTGTGTGTCTGGAAATCAGGGTTGTCTTTTACTCCTTCGGGCGATATTTGCACGTTGGGCCTCCCTGGAATTATGTGCTGGTGACAATTACCATGCTAGGAGGAGCATTGGCAGCAGGAGGTTATGGGATTGGTCTGGTTAACGATGCTTTTGGCTCGGCTGCATTTACTGGCTTGTCAATTTTGGTGGCTTCAACCGGGTCGATTGTCGTCGGCATACCACTCAAGTTCTTGCCCGCACCAATTGTTGCTGGTTTTTATATATCTCAGTTTTTCATCAAGAAGAACCTATCATCTTATTTCATATTTGTTGTCTCAGCAAGCTTGCCAATTGTATGGTTTGTTGTGCACAACTACTGGGATCTCAATATTTGGTTAGCTGGTATGGCACTCAGATCCGTTTGCAAGTTCATCATTGCAAGTGTTGTGCTGGCCATGGTGATTCCGGGCCTAGCGCTTCTTCCTCCAAAGGCTCGTGTTGTGACAGAATGCGGTCTTATAGTCCACACATTGCTAGTCTGCTATATTGAGAATCGATTATTTACCTATACTAGCATCTATTACTTTGGTTTTGATGATGATGTTATTTACCCCAGTTACATGGTTATCACAACGACAGTTTTAGGTTTGGCTTTGGTCAGAAGATTGGCCTTGGACAATCGAATTGGTCCCAAGGCAGTTTGGATTTTGACGTGCTTGTACGCAGCAAAATTGTCAATGCTTGTTCTCACTTCAAAGACTGTTCTGTGGGCTACTGTCATCCTATTGTTGGCTGTGTCTCCTCCATTGCTTCTTTACAAAGACAAGGGTAAAACAGCTTCAAGAATGAAACCATGGCAAGGTTTTTCACATGCTGTTGTTGTTACTGTATCTGTCTGTTACTGTCGGCAAACAATCTTTGAAGCTCTCCAGTGGTGGAATGGAAGACCACCATCAGATGGTCTGCTTTTGGGATTTATTGTACTGTTATCAGGCCTGGCATGTGTTCCAATTGTTGCACGGCATTTCTCCCACATTCAGTTAGTGAAGCGCGTGCTACTTCTGGTGGTGTCTGTTGGTGTCTTGCTTATATTTATGCAGCCTCCATTACCAGAGACATGGTCATTTCAATCTAAATTGATGTACATACCTGAGCAGTCTATGGATGATAGTTCCATCTATGGTTCAATCACCAAGAAACCGTCCTGGCCATCGTGGTTACTTATAGCAACAATTATTGCTTCATTGGCTGCATTCACCAAAACTATTCCAGTGCAGTACATTGTAGAGCTTAGACTACTATACGCTGTGGTTGTGGGGATCACGTTTGGCATCTACATCTGTGCTGAGTTCTTTATTCAAACTCCCATTCTACATGCCTTGCTTGTTGGAGCTATGACATGCGCATCTGTCTTTGTGGTCTTTACACACTTTCCTTCGACATCAAGCCTGAGGTTTTTACCCTGGGTGTTTGCACTCCTCGTTGCACTTCTACCTGTTATGTATTTGTTGGAAGGTCAGTTGAGGTTAGCGAATGCGGAAAATGGAGAAGATGAGAGGTTTGTTGCACTGTTAACCCTTGAAGGGGCTCGGATATCTTTGTTGGGATTGTATGCTGCAATTTTCATGTTGATAGCGTTGGAAATAAAGATTGAGTTGGCATCATTGATGAAGGAGAAAGCTTTAGAGAAAGGAAGAGTGCAAAATTTATCAACTAAGAGCTCTGGTTTTGTTCCAAAGTATCGTCTACTTCAACAACGTCGAGCATCCGTGGCATCTTCTTTCACGGTAAAGAAGCTAGCTGCAGAAGGGGCATGGATGCCTTCAGTTGGCAATGTTGCAACTATGCTGTGTTTCTTGATCTCATTGATTCTGAATGTCCATTTGACTGGGGGCTCCGATAGGGCAATTTTTATTCTGGTACCAATATTGCTGCTGCTCAACCATGACTCTAACTTTTCTACGGGTTTTGGAGATAGACAACGATATTTTCCTTTGACTGCAGTTCTCTCCTTATATTTAGTAGCATCTGCCATATACAGATTGTGGGATGAAGTATGGCATGGATATTCTTCTTGGGGACTTGACGTCGGAGGTCCAGGTTGGTTCTTTGCTGTAAAAAATGCAGCTTTATTGATGCTAACATTACCTAATCATGTGCTATTCAATCGCTTTATGTGGGATTATGCAAGACAGTCAGATCTAATATTGTTAATGATCATGCCCCTCAATTTGCCTTCAGTCGTGATGGCTGATATAATAACTATTAAAGTTTTGGCATTGTTAGGCATTATATACGCTTTAGTCCAGTATTTGGTATCAAGGCATATACGAATCAAGGGAATGAAGTTCATTTGA___CAAGACTGATGAGTTGTAATGAGGATTTTTGTGGAACTCAGTTCCGTTCGGATTGTTTTATTGTTTACTGCATGATGGTGCCTTTTCTGTGGGCTGATGGCTCTCACAAAATAATTTAGCTTGATGTGTTTGACTTTTGATGGTTGGCGCAAATAAGCTGAATCAATGAGTTAGATGTGAGGAATAAGTATCTCTAAGTAAAGCTGTGGTAGATGCTTCTAGGTTGCAAAGTCAATTGATTTTCAACACCCCATTCTATGTCTCTAATCTGGGAATTTAAATTTTGTGATAGATAGGTTAGTCACATCAGGTCTATTTGGCATTCTTAATGCAGGATATAATGAGCTTGTTTTTCCAGAATCTGGTGACAAGCTGCCGTACTGTCCTTGATAGTTAGGCCACAAACAATGGCCTGTTAACTCAATTTGAATTGAAGGTTTTCTCTTTTCTTTTCC

Fln Alignment:

Contig1296___SSPLNRSEKARS-GEPRFSPSASFAYNARIAIALGPCAALLIEMGGIPVMATLTVGLMVSYILDSLQLKQGAFFGIWSTLLVSQLAFVLGGSTLSAIDSWPLYILAVLVCCEANFLIGVWASLQFRWLQLENPSIVVTLERLLFACIPFTASVIWTWGAVAAVGMDHAPYYFMTILCIFYWLYSLPRQSSFRTKAEKRY-GGQLADEALILGPXXXXXXXXXXXXXXXXXYIGSHHSVIFSSMATXXXXXXXXXXXXXXXXYASAFGALWYISKDPASLQQIRIVNGAIALLVVIVCLEIRVVFYSFGRYLHVGPPWNYVLVTITMXXXXXXXXXXXXXXVNDAFGSAAFTGLSILVASTGSIVVGIPLKFLPAPIVAGFYISQFFIKKNLSSYFIFVVSASLPIVWFVVHNYWDLNIWLAGMALRSVCKFIIASVVLAMVIPGLALLPPKARVVTECGLIVHTLLVCYIENRLFTYTSIYYFGFDDDVIYPSYMVITXXXXXXXXXXXXXXDNRIGPKAVWILTCLYAAKLSMLVLTSKTVLWATVIXXXXXXXXXXXYKDKGKTASRMKPWQGFSHAVVVTVSVCYCRQTIFEALQWWNGRPPSDXXXXXXXXXXXXXACVPIVARHFSHIQXXXXXXXXXXXXXXXXIFMQPPLPETWSFQSKLMYIPEQSMDDSSIYGSITKKPSWPSWXXXXXXXXXXXXFTKTIPVQYIVELRLLYAVVVGITFGIYICAEFFIQTPILHALLVGAMTCASVFVVFTHFPSTSSLRFLPWVFXXXXXXXXXXXXXEGQLRLAN--AENG------EDERFVALLTLEGARISLLGLYAAIFMLIALEIKIELASLMKEKALEKGRVQNLSTKSS--GFVPKYRLLQQRRASVASSFTVKKLAAEGAWMPSVGNVATMLCFLISLILNVHLTGGSDRAIFILVPILLLLNHDSNFSTGFGDRQRYFPLTAVLSLYLVASAIYRLWDEVWHGYSSWGLDVGGPGWFFAVKNAALLMLTLPNHVLFNRFMWDYARQSDXXXXXXXXXXXXSVVMADIITIKVLALLGIIYALVQYLVSRHIRIKGMKFI
D7TFK4______________NSPFMGNGRSRSLSKSRFSPS-SFIHNARIAIALVPCAAFLLDLGGTPVVATLTLGLMIAYILDSLNFKSGSFFGVWFSLIAAQIAFFFSSSIFSTFNSIPLSLLAAFLCAETNFLIGVWASLQFKWIQIENPSIVLALERLLFACVPFAASALFAWATISAVGMNNASYYLMAFNCVFYWVFSIPRISSFKNKQEVGYHGGEVPDDILILGPLESCFHTLNLLFFPLVFHIASHYSVMFLSAASVSDLFLLFFIPFLFLLYASTRGALWWVTKNAHQLQSIRVVNGAIALVVVVICLEIRVVFHSFGRYIQVPPPLNYLLVTTTMLGGASAAGAYAVGMIGDAFSSLAFTALAVLVSAAGAIVVGFPILFLPLPAVSGFYLARFFTKKSLPSYFAFVVLGSLMVTWFVLHNFWDLNIWLAGMSLKSFCKLILVDVVLAMVIPGLALLPSKLHFLTEVGLISHALLLCYIENRFFSYSSIYYYGLDEDVMYPSYMVIMTTFLGLALVRRLLVDQRIGPKAVWVLICLYSSKLAMLFISSKSVVWVTAVLLLAVSPPLLLYKDKSRMASKMKAWQGYAHASVVALSVWFCRETIFEALQWWHGRPPSDGLLLGFCIVLTGLACVPIVAVHFSHVLSAKRCLVLVVATGLLFMLMEPPIPLSWTYRSDLIKAARQSSDDVSIYGFVASKPTWPSWLLIAAILLTLAAVTSIIPINYMVELRALYSVAIGIALGIYISAEYFLQAAVLHALIVITMVCASVFVVFTHFPSASSTRFLPWVFALLVALFPVTYLLEGQMRIKSILVDSGVEDMVEEDYKLTALLAIEGARTSLLGLYAAIFMLIALEIKFELASLLREKAFERGGRHNQSAQSSSANFPAKMRFMQQRRASTVPTFTIKRMAAEGAWMPAVGNVATVMCFAICLILNVNLTGGSNRAIFFLAPVLLLLNQDSDLVAGFGDKQRYFPVTIVISAYLVLTSLYSIWEDVWHGNAGWGLEIGGPDWFFAVKNLALLILTFPSHILFNRFVWSYTKQTDSTPLLTLPLNLPSIIITDVIKVKILGLLGIIYSLAQYLISRQQYITGLKYI

SNPs (tot: 79)

Position	A %	C %	G %	T %	Probability
542		42	57		1.0
713	16		83		0.994512
715			83	16	0.994512
750	12	87			0.992554
753		12		87	0.992554
754	87	12			0.992554
756	12			87	0.992554
761		14		85	0.993533
778		12		87	0.992554
782		87	12		0.992554
783			12	87	0.992554
788			87	12	0.992554
789		75		25	1.0
790	12			87	0.992554
791		12	87		0.992554
860		87		12	0.992554
862	87		12		0.992554
863	87		12		0.992554
936	83		16		0.994512
942		16		83	0.994512
945		83		16	0.994512
946	83		16		0.994512
947			16	83	0.994512
949	83			16	0.994512
950			16	83	0.994512
953	16	83			0.994512
954		16	83		0.994512
1112	83		16		0.994512
1192			83	16	0.994512
1203	14	85			0.993533
1286		16		83	0.994512
1334		75		25	1.0
1391			14	85	0.993533
1520	50		50		1.0
1626	33		66		0.997452
1663	25			75	0.996473
1666			25	75	0.996473
2053		66		33	0.997452
2125	25		75		0.996473
2126	25		75		0.996473
2127		75		25	0.996473
2128	75		25		0.996473
2145			16	83	0.994512
2146			16	83	0.994512
2175			16	83	0.994512
2286	10		90		0.90298
2287	10		90		0.90298
2289			10	90	0.90298
2290		90		10	0.90298
2409			90	10	0.90298
2432		10		90	0.90298
2552		72		27	1.0
2732	12		87		0.992554
2776	14		85		0.993533
2972	18		81		0.999994
3122		10		90	0.90298
3123			10	90	0.90298
3125	90	10			0.90298
3128	90		10		0.90298
3129	10		90		0.90298
3131	90	10			0.90298
3136		90	10		0.90298
3140	88		11		0.923564
3144	88			11	0.923564
3145		11	88		0.923564
3158	81	18			0.999994
3161	81	18			0.999994
3164		18	81		0.999994
3166	81			18	0.999994
3170	81	18			0.999994
3172	81		18		0.999994
3174	18			81	0.999994
3177		18		81	0.999994
3178	18	81			0.999994
3261		14	85		0.999981
3563		18		81	0.999994
3593		11	88		0.923564
3654	12			87	0.992554
3697	50			50	1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain