SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene1258

Length: 3690 nt

UniGene Fasta

>sp_v3.0_unigene1258
CTTTGATTGCATAAAATAAAGTCATCCAGAAGGAAGATTATACCCAGATTCAGCAATGGAGGCTAGCGATGGTATGATTGCAGGTTCTCACAAGAGAAACGAGTTGGTTTCTATTCGCCGTGACACACAAGTTGGTCCGAAGCCTCTGAAGCACTCGAGCAGCCAAGTATGCCAGATCTGCGGTGACAATGTTGGTTTGACAGAAAATAGGGAGCTGTTTGTGGCGTGCAATGAGTGTGCATTTCCAGTTTGTAGGCCTTGCTATGAGTACGAGCGTAAGGATGGAAACCAATCTTGTCCTCAATGCAAGACCAGATACAAGAGGCATAAAGGAAGTCCAAGAGTGGAAGGTGACGAGGAAGAAGATGATGTTGATGATTTGGAGAGTGAATTCAACTTCACTCATGGTCAAAGAGATGACAGGAAACAAAGGACAGAATCAATGATGCAGTGGCAGATGCATGGGCAAGGGGGAGAGATTGATTCAGTTACCTCTTCAAGACAGGATCCTCAGAGTCAAGTTCCTCTTCTCATGAATGATCAACCGGTCTCTGGGGAGTTGCCAGATTTTTCCCCTGAGCATGGGAAAGTCACTGGTAGTGGAGATGGAAAACGTGCTCATTCCAATCGACGAGTTCAAGTAAGGATTGTGGACCCTTCCAAGGACTTGAATTCTTATGGAGTTGGAAATGTGGACTGGAAAGAAAGAGTAGAAGGCTGGAAGCTTAAACAAGGGAAAAATACGCTTCAAATGACAAATGGAGGTAGAAATGCTGATGGCAAAGGGGACATGGAGGGCACTGGTTCCAACGGGGAAGACCTCCCAATGGTTGATGATGCACAACAACCACTGAATAAGATTGTGCCTCTTCCTTCCTCCAAGCTTACTCCATACAGGATTGTGATTATTCTTCGGCTCATAATCTTAGGAATTTTCTTCGAATACCGAGTATCAAATCCTGTTAGTGGTGCATATCCACTTTGGTTGATCTCAGTGATATGTGAGGTCTGGTTTGCTGTGTCATGGGTTCTTGACCAGTTTCCTAAATGGATGCCCATTAATCGAGAAACCTATCTTGACAGGCTTTCTTTGAGGTTTGACAGAGAAGGAGAGCCATCTCAGTTGGCTGGTGTTGATATTTTTGTCAGTACAGTGGACCCTCTAAAGGAGCCTCCTCTTGTCACAGCAAATACTGTTCTGTCTATCCTTGCTGTGGATTATCCTGTTGATAAAGTTTCATGTTATGTTTCTGATGATGGAGCAGCAATGTTGACTTTTGAAGCCCTTTCAGAAACATCAGAATTTGCAAGGAAATGGGTGCCATTTTGTAAAAAGTACAGTATCGAACCGAGGGCTCCAGAATTCTACTTTGCCCAGAAGATTGACTATTTGAAGGATAAAGTACAACCTTCCTTTGTGAAAGAACGCAGAGCAATGAAGAGGGAATATGAAGAGTTCAAGATCCGAATTAATGCTCTTGTGGCCAAAGCACAAAAAGTTCCTGATGAGGGATGGACCATGCAAGATGGGACTCCATGGCCAGGCAACAACACTCGAGACCATCCTGGGATGATCCAGGTATTCTTAGGTCACAGTGGGGGAGTTGACAATGATGGCAATGAATTACCACGGTTAGTTTATGTATCCCGTGAAAAGAGGCCTGGTTTCCAACACCACAAGAAAGCCGGTGCAATGAATGCATTGGTCCGAGTGTCTGCTGTCCTCACAAATGGCCTCTTTCTGTTGAACCTTGATTGTGATCATTATATAAACAACAGCAAAGCTATTCGTGAGGCAATGTGTTTTCTAATGGATCCAGCTCTTGGGAAGAAAACATGCTATGTACAGTTTCCTCAGAGATTTGATGGCATTGATCGACACGATCGATATGCTAATCGTAACACCGTGTTCTTTGATATCACCTTGAGAGGTTTCGATGGTATCCAAGGGCCTGTTTATGTGGGTACAGGGTGTTGTTTTAATAGACAAGCACTCTATGGTTATGATCCTGTTCTCACTGAGAAGGATCTTGAACCAGCATGTTTTCTGAGATGTTGCTGGGGATCTAGAAAGAAGAGCAGAAAAGCAAACAAAAGGTATGATGACGATAAGAAGAGAACCAAGAGAACTGAATCTACTATACCCATCTTTAGTTTGGAAGACATAGAAGAGGGTGTTGAAGGATTTGATGATGAGAAATCATTGCTCATGTCCCAAAGGAGCTTAGAGAAAAGATTTGGTCAATCACCAGTGTTTATTCAATCTACCCTCATGGAAAATGGTGGTCTTCCACAATCTGCGAATCCTGCTTCTTTATTGAAAGAAGCCATTCATGTTATCAGCTGTGGATATGAAAACAAATCAGAATGGGGAAAAGAGATTGGGTGGATTTACGGTTCAGTCACAGAAGACATTTTGACTGGGTTTAAAATGCATGCTCGAGGCTGGATTTCAATATACTGCATACCCAAACGCCCTGCATTCAAAGGATCGGCACCAATCAATCTTTCAGATCGTTTGAATCAAGTGCTCCGATGGGCCCTTGGTTCTGTTGAAATTTTGTTGAGCAGGCATTGTCCAATTTGGTATGGCTACACTGGAAGATTGAAACCATTGCAGAGGCTGGCGTACATCAATACCATAGTTTATCCTCTCACATCCCTCCCACTGGTTGCATATTGTACCCTGCCAGCTGTTTGTCTTCTTACAGGGAAGTTTATCATTCCTGAGATTAGCAACTTTGCAAGTGTGTTCTTCATATTATATTTTATTTCCATTTTTACAACTGCTATTCTAGAGCTACGCTGGAGTACAGTTGGCATTGATGAATGGTGGAGGAATGAGCAATTTTGGGTTATTGGAGGTGTATCAGCACATCTGTTTGCAGTCTTTCAAGGGTTACTGAAAGTTCTGGCAGGGATTGACACAAACTTTACTGTCACATCGAAGTCTTCAGATGAAGATGGTGAATTTGCTGAGCTTTATGTTTTTAAGTGGACCAGTCTTCTCATCCCTCCAACTACTTTGCTTGTGGTAAATCTTGTTGGTGTAGTAGCAGGTGTTTCCCAAGCTATTAATAGTGGTTATCAATCTTGGGGTCCATTGTTTGGAAAACTGTTTTTCTCTCTGTGGGTGATTGTTCATCTTTATCCATTCCTCAAGGGATTAATGGGTCGCCAGAACAGGACACCAACAATAGTTATTGTTTGGTCAATTCTTCTTGCGTCCATATTCTCCCTGCTTTGGGTGAGGATAGATCCTTTCACAGCAAGCACAGGATCATCATCAAGCACACAGCAATGTGGTGTAAATTGCTAAAACCCCCTGTTAGTGTTCCCTAGCAGCAAATAAGGAGGAACTAAAAACACATCTGAGGGCCAAGAATATCTCAAATTCGTTTGTATCATCTGTAGATAATAATATTTGAGAGGGAGGGGCTTTAAGCATATTGCTTTCTAGCTAGTTCCAGCATGGGGACTGAACCTTGTACTTTGTCTTTGATTGATAGTTAAGATTGTACGGTGCAGTTGGTTCTCTGTTTCAACCAAGACAGCTGAGGTTTACTTGGAGTCATGCCTGTTCCAGAACTGATCTGATGCCACAGAATAGTGGGCAATGGATTATATGGTTTGATATTGAAGAATGTATTTTTCAAAATATTTATTCATTTTTAAGTGACATTCATGTCA

Ace file of the UniGene sp_v3.0_unigene1258

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR	-	-	75%
FL-Next	tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis).	-	-	75%
Sma3	Cellulose synthase	-	-	-

Source	ECs	Term	Type	e value	Identity
Sma3	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	4.449e-07	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Fructose and mannose metabolism	00051		4.449e-07	%
Sma3	N-Glycan biosynthesis	00510		4.449e-07	%
Sma3	Mucin type O-Glycan biosynthesis	00512		4.449e-07	%
Sma3	Various types of N-glycan biosynthesis	00513		4.449e-07	%
Sma3	Other types of O-glycan biosynthesis	00514		4.449e-07	%
Sma3	Biosynthesis of 12-, 14- and 16-membered macrolides	00522		4.449e-07	%
Sma3	Glycosaminoglycan biosynthesis - keratan sulfate	00533		4.449e-07	%
Sma3	Lipopolysaccharide biosynthesis	00540		4.449e-07	%
Sma3	Peptidoglycan biosynthesis	00550		4.449e-07	%
Sma3	Glycerolipid metabolism	00561		4.449e-07	%
Sma3	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563		4.449e-07	%
Sma3	Sphingolipid metabolism	00600		4.449e-07	%
Sma3	Glycosphingolipid biosynthesis - lacto and neolacto series	00601		4.449e-07	%
Sma3	Glycosphingolipid biosynthesis - globo series	00603		4.449e-07	%
Sma3	Glycosphingolipid biosynthesis - ganglio series	00604		4.449e-07	%
Sma3	Carotenoid biosynthesis	00906		4.449e-07	%
Sma3	Zeatin biosynthesis	00908		4.449e-07	%
Sma3	Flavonoid biosynthesis	00941		4.449e-07	%
Sma3	Anthocyanin biosynthesis	00942		4.449e-07	%
Sma3	Flavone and flavonol biosynthesis	00944		4.449e-07	%
Sma3	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945		4.449e-07	%
Sma3	Betalain biosynthesis	00965		4.449e-07	%
Sma3	Biosynthesis of type II polyketide products	01057		4.449e-07	%
Sma3	Metabolic pathways	01100		4.449e-07	%
Sma3	Biosynthesis of secondary metabolites	01110		4.449e-07	%
Sma3	Cellulose synthase (UDP-forming).	EC:2.4.1.12	-	0.0	-

Source	KEGGs	Term	Type	e value	Identity
Sma3	Starch and sucrose metabolism	00500		0.0	%

Source	Gene names
Sma3	ATHA; ATHB; At1g02730; At1g32180; At2g21770; At2g25540; At3g03050; At4g18780; At4g32410; At4g39350; At5g05170; At5g09870; At5g17420; At5g44030; At5g64740; CESA09; CESA1; CESA10; CESA11; CESA13; CESA2; CESA3; CESA4; CESA5; CESA6; CESA7; CESA8; CESA9; CEV1;

Source	GOs	Term	Type	Identity
Sma3	Golgi membrane	GO:0000139	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	endoplasmic reticulum	GO:0005783	Cellular Component	-
Sma3	Golgi apparatus	GO:0005794	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	chloroplast	GO:0009507	Cellular Component	-
Sma3	cellulose synthase complex	GO:0010330	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	oxidoreductase activity	GO:0016491	Molecular Function	-
Sma3	cellulose synthase (UDP-forming) activity	GO:0016760	Molecular Function	-
Sma3	1,4-beta-D-xylan synthase activity	GO:0047517	Molecular Function	-
Sma3	defense response	GO:0006952	Biological Process	-
Sma3	response to osmotic stress	GO:0006970	Biological Process	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	response to cold	GO:0009409	Biological Process	-
Sma3	response to water deprivation	GO:0009414	Biological Process	-
Sma3	primary cell wall biogenesis	GO:0009833	Biological Process	-
Sma3	secondary cell wall biogenesis	GO:0009834	Biological Process	-
Sma3	positive regulation of abscisic acid biosynthetic process	GO:0010116	Biological Process	-
Sma3	rhamnogalacturonan I side chain metabolic process	GO:0010400	Biological Process	-
Sma3	cell growth	GO:0016049	Biological Process	-
Sma3	cellulose biosynthetic process	GO:0030244	Biological Process	-
Sma3	hyperosmotic salinity response	GO:0042538	Biological Process	-
Sma3	cell wall biogenesis	GO:0042546	Biological Process	-
Sma3	defense response to bacterium	GO:0042742	Biological Process	-
Sma3	cortical microtubule organization	GO:0043622	Biological Process	-
Sma3	shoot development	GO:0048367	Biological Process	-
Sma3	defense response to fungus	GO:0050832	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Pyridine nucleotide-disulphide oxidoreductase, class-II	IPR000103	-	-
Sma3	WD40 repeat	IPR001680	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Cellulose synthase	IPR005150	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	Zinc finger, RING-type, conserved site	IPR017907	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	Gonadotropin, beta subunit, conserved site	IPR018245	-	-
Sma3	WD40 repeat, conserved site	IPR019775	-	-
Sma3		IPR019782	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT4G32410.1	CESA1, RSW1, AtCESA1 cellulose synthase 1 chr4:15641009-15646388 REVERSE LENGTH=1081	75%
RefSeq	Arabidopsis thaliana	NP_194967.1	cellulose synthase A catalytic subunit 1 [UDP-forming] [Arabidopsis thaliana]	75%
RefSeq	Populus trichocarpa	XP_002324291.1	cellulose synthase [Populus trichocarpa]	79%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: Q4VWW7

Fln msg:

Fln protein: MEASDGMIAGSHKRNELVSIRRDTQVGPKPLKHSSSQVCQICGDNVGLTENRELFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVEGDEEEDDVDDLESEFNFTHGQRDDRKQRTESMMQWQMHGQGGEIDSVTSSRQDPQSQVPLLMNDQPVSGELPDFSPEHGKVTGSGDGKRAHSNRRVQVRIVDPSKDLNSYGVGNVDWKERVEGWKLKQGKNTLQMTNGGRNADGKGDMEGTGSNGEDLPMVDDAQQPLNKIVPLPSSKLTPYRIVIILRLIILGIFFEYRVSNPVSGAYPLWLISVICEVWFAVSWVLDQFPKWMPINRETYLDRLSLRFDREGEPSQLAGVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEFYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKIRINALVAKAQKVPDEGWTMQDGTPWPGNNTRDHPGMIQVFLGHSGGVDNDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGLFLLNLDCDHYINNSKAIREAMCFLMDPALGKKTCYVQFPQRFDGIDRHDRYANRNTVFFDITLRGFDGIQGPVYVGTGCCFNRQALYGYDPVLTEKDLEPACFLRCCWGSRKKSRKANKRYDDDKKRTKRTESTIPIFSLEDIEEGVEGFDDEKSLLMSQRSLEKRFGQSPVFIQSTLMENGGLPQSANPASLLKEAIHVISCGYENKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCIPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYTGRLKPLQRLAYINTIVYPLTSLPLVAYCTLPAVCLLTGKFIIPEISNFASVFFILYFISIFTTAILELRWSTVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKSSDEDGEFAELYVFKWTSLLIPPTTLLVVNLVGVVAGVSQAINSGYQSWGPLFGKLFFSLWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTASTGSSSSTQQCGVNC*

Protein Length: 1089

Fln nts: CTTTGATTGCATAAAATAAAGTCATCCAGAAGGAAGATTATACCCAGATTCAGCA_-_ATGGAGGCTAGCGATGGTATGATTGCAGGTTCTCACAAGAGAAACGAGTTGGTTTCTATTCGCCGTGACACACAAGTTGGTCCGAAGCCTCTGAAGCACTCGAGCAGCCAAGTATGCCAGATCTGCGGTGACAATGTTGGTTTGACAGAAAATAGGGAGCTGTTTGTGGCGTGCAATGAGTGTGCATTTCCAGTTTGTAGGCCTTGCTATGAGTACGAGCGTAAGGATGGAAACCAATCTTGTCCTCAATGCAAGACCAGATACAAGAGGCATAAAGGAAGTCCAAGAGTGGAAGGTGACGAGGAAGAAGATGATGTTGATGATTTGGAGAGTGAATTCAACTTCACTCATGGTCAAAGAGATGACAGGAAACAAAGGACAGAATCAATGATGCAGTGGCAGATGCATGGGCAAGGGGGAGAGATTGATTCAGTTACCTCTTCAAGACAGGATCCTCAGAGTCAAGTTCCTCTTCTCATGAATGATCAACCGGTCTCTGGGGAGTTGCCAGATTTTTCCCCTGAGCATGGGAAAGTCACTGGTAGTGGAGATGGAAAACGTGCTCATTCCAATCGACGAGTTCAAGTAAGGATTGTGGACCCTTCCAAGGACTTGAATTCTTATGGAGTTGGAAATGTGGACTGGAAAGAAAGAGTAGAAGGCTGGAAGCTTAAACAAGGGAAAAATACGCTTCAAATGACAAATGGAGGTAGAAATGCTGATGGCAAAGGGGACATGGAGGGCACTGGTTCCAACGGGGAAGACCTCCCAATGGTTGATGATGCACAACAACCACTGAATAAGATTGTGCCTCTTCCTTCCTCCAAGCTTACTCCATACAGGATTGTGATTATTCTTCGGCTCATAATCTTAGGAATTTTCTTCGAATACCGAGTATCAAATCCTGTTAGTGGTGCATATCCACTTTGGTTGATCTCAGTGATATGTGAGGTCTGGTTTGCTGTGTCATGGGTTCTTGACCAGTTTCCTAAATGGATGCCCATTAATCGAGAAACCTATCTTGACAGGCTTTCTTTGAGGTTTGACAGAGAAGGAGAGCCATCTCAGTTGGCTGGTGTTGATATTTTTGTCAGTACAGTGGACCCTCTAAAGGAGCCTCCTCTTGTCACAGCAAATACTGTTCTGTCTATCCTTGCTGTGGATTATCCTGTTGATAAAGTTTCATGTTATGTTTCTGATGATGGAGCAGCAATGTTGACTTTTGAAGCCCTTTCAGAAACATCAGAATTTGCAAGGAAATGGGTGCCATTTTGTAAAAAGTACAGTATCGAACCGAGGGCTCCAGAATTCTACTTTGCCCAGAAGATTGACTATTTGAAGGATAAAGTACAACCTTCCTTTGTGAAAGAACGCAGAGCAATGAAGAGGGAATATGAAGAGTTCAAGATCCGAATTAATGCTCTTGTGGCCAAAGCACAAAAAGTTCCTGATGAGGGATGGACCATGCAAGATGGGACTCCATGGCCAGGCAACAACACTCGAGACCATCCTGGGATGATCCAGGTATTCTTAGGTCACAGTGGGGGAGTTGACAATGATGGCAATGAATTACCACGGTTAGTTTATGTATCCCGTGAAAAGAGGCCTGGTTTCCAACACCACAAGAAAGCCGGTGCAATGAATGCATTGGTCCGAGTGTCTGCTGTCCTCACAAATGGCCTCTTTCTGTTGAACCTTGATTGTGATCATTATATAAACAACAGCAAAGCTATTCGTGAGGCAATGTGTTTTCTAATGGATCCAGCTCTTGGGAAGAAAACATGCTATGTACAGTTTCCTCAGAGATTTGATGGCATTGATCGACACGATCGATATGCTAATCGTAACACCGTGTTCTTTGATATCACCTTGAGAGGTTTCGATGGTATCCAAGGGCCTGTTTATGTGGGTACAGGGTGTTGTTTTAATAGACAAGCACTCTATGGTTATGATCCTGTTCTCACTGAGAAGGATCTTGAACCAGCATGTTTTCTGAGATGTTGCTGGGGATCTAGAAAGAAGAGCAGAAAAGCAAACAAAAGGTATGATGACGATAAGAAGAGAACCAAGAGAACTGAATCTACTATACCCATCTTTAGTTTGGAAGACATAGAAGAGGGTGTTGAAGGATTTGATGATGAGAAATCATTGCTCATGTCCCAAAGGAGCTTAGAGAAAAGATTTGGTCAATCACCAGTGTTTATTCAATCTACCCTCATGGAAAATGGTGGTCTTCCACAATCTGCGAATCCTGCTTCTTTATTGAAAGAAGCCATTCATGTTATCAGCTGTGGATATGAAAACAAATCAGAATGGGGAAAAGAGATTGGGTGGATTTACGGTTCAGTCACAGAAGACATTTTGACTGGGTTTAAAATGCATGCTCGAGGCTGGATTTCAATATACTGCATACCCAAACGCCCTGCATTCAAAGGATCGGCACCAATCAATCTTTCAGATCGTTTGAATCAAGTGCTCCGATGGGCCCTTGGTTCTGTTGAAATTTTGTTGAGCAGGCATTGTCCAATTTGGTATGGCTACACTGGAAGATTGAAACCATTGCAGAGGCTGGCGTACATCAATACCATAGTTTATCCTCTCACATCCCTCCCACTGGTTGCATATTGTACCCTGCCAGCTGTTTGTCTTCTTACAGGGAAGTTTATCATTCCTGAGATTAGCAACTTTGCAAGTGTGTTCTTCATATTATATTTTATTTCCATTTTTACAACTGCTATTCTAGAGCTACGCTGGAGTACAGTTGGCATTGATGAATGGTGGAGGAATGAGCAATTTTGGGTTATTGGAGGTGTATCAGCACATCTGTTTGCAGTCTTTCAAGGGTTACTGAAAGTTCTGGCAGGGATTGACACAAACTTTACTGTCACATCGAAGTCTTCAGATGAAGATGGTGAATTTGCTGAGCTTTATGTTTTTAAGTGGACCAGTCTTCTCATCCCTCCAACTACTTTGCTTGTGGTAAATCTTGTTGGTGTAGTAGCAGGTGTTTCCCAAGCTATTAATAGTGGTTATCAATCTTGGGGTCCATTGTTTGGAAAACTGTTTTTCTCTCTGTGGGTGATTGTTCATCTTTATCCATTCCTCAAGGGATTAATGGGTCGCCAGAACAGGACACCAACAATAGTTATTGTTTGGTCAATTCTTCTTGCGTCCATATTCTCCCTGCTTTGGGTGAGGATAGATCCTTTCACAGCAAGCACAGGATCATCATCAAGCACACAGCAATGTGGTGTAAATTGCTAA___AACCCCCTGTTAGTGTTCCCTAGCAGCAAATAAGGAGGAACTAAAAACACATCTGAGGGCCAAGAATATCTCAAATTCGTTTGTATCATCTGTAGATAATAATATTTGAGAGGGAGGGGCTTTAAGCATATTGCTTTCTAGCTAGTTCCAGCATGGGGACTGAACCTTGTACTTTGTCTTTGATTGATAGTTAAGATTGTACGGTGCAGTTGGTTCTCTGTTTCAACCAAGACAGCTGAGGTTTACTTGGAGTCATGCCTGTTCCAGAACTGATCTGATGCCACAGAATAGTGGGCAATGGATTATATGGTTTGATATTGAAGAATGTATTTTTCAAAATATTTATTCATTTTTAAGTGACATTCATGTCA

Fln Alignment:

Contig1258___MEASDGMIAGSHKRNELVSIRRDTQVGPKPLKHSSSQVCQICGDNVGLTENRELFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVXXXXXXXXXXXXXXXFNFTHGQRDDRKQRTESMMQWQM-HGQGGEIDSVTSSRQD-PQSQVPLLMNDQPVSGELPDFSPEHGKV----TGSGDGKRAH------SNRRVQVRIVDPSKDLNSYGVGNVDWKERVEGWKLKQGKNTLQMTNGGRNA-DGK-GDMEGTGSNGEDLPMVDDAQQPLNKIVPLPSSKLTPYXXXXXXXXXXXXXFFEYRVSNPVSGAYPLWLISVICEVWFAVSWVLDQFPKWMPINRETYLDRLSLRFDREGEPSQLAGVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEFYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKIRINALVAKAQKVPDEGWTMQDGTPWPGNNTRDHPGMIQVFLGHSGGVDNDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGLFLLNLDCDHYINNSKAIREAMCFLMDPALGKKTCYVQFPQRFDGIDRHDRYANRNTVFFDITLRGFDGIQGPVYVGTGCCFNRQALYGYDPVLTEKDLEPACFLRCCWGSRKKSRKANXXXXXXXXXXXXXESTIPIF-SLEDIEEGVEGFDDEKSLLMSQRSLEKRFGQSPVFIQSTLMENGGLPQSANPASLLKEAIHVISCGYENKSEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCIPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYTGRLKPLQRLAYINTIVYPLTSLPLVAYCTLPAVCLLTGKFIIPEISNFASVFFILYFISIFTTAILELRWSTVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKSSDEDGEFAELYVFKWTSXXXXXXXXXXXXXXXXXXXXSQAINSGYQSWGPLFGKLFFSLWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPFXXXXXXXXXXQQCGVNC
Q4VWW7______________MEARTNTAAGSNKRNVRVSVRDDGELGPKPPQHINSHICQICGEDVGLAADGEFFVACNECAFPVCRPCYEYEWKDGNQSCPQCKTRYKWHKGSPQVDGDKEDECADDLDHDFNSTQGNRNEKQQIAEAMLHWQMAYGRGEDVGPSRSESQELPQLQVPLITNGQAISGELPAGSSEYRRIAAPPTGGGSGKRVHPLPFPDSTQTGQVRAEDPAKDFNSYGFGNVAWKERVESWKNKQDKNTLQVTSDTYYASEGKDGDIDGCVADEEDLQMSDEARQPLSRKVPIASSKINPYRMVIVLRLVILCFFFRYRILNPVRNAYGLWFTSVICEIWFAISWILDQFPKWLPINRETYLDRLCLRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFVKKFDIEPRAPEWYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFEHHKKAGAMNSLVRVSAVLTNGPYMLNLDCDHYINNSRALREAMCFMMDPTLGKKVCYVQFPQRFDGIDRNDRYANHNTVFFDINLKGLDGIQGPVYVGTGCVFNRQALYGYEPPHKGK----IHFSSCC-GPRKKSRKSNKKYNDTKKLDRPTDSTVPIFSSLEDIEGGVEGFDDEKSPLVFQKSLEKKFGQSLVFVASTQMENGGVPQSATPADLLKEAIHVISCGYEDKSDWGKEIGWIYGSVTEDILTGFKMHARGWRSIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYTGRLKWLERLAYINTTVYPITSIPLLAYCTLPAICLLTGKFIIPEISTLASLWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGVDTNFTVTSKASDEGGDFAELYIIKWTALLIPPTTLLIINIVGVVAGISYAISTGYRSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF-TTRIKGPDLQQCGINC

SNPs (tot: 55)

Position	A %	C %	G %	T %	Probability
1669		66		33	0.997452
1672	66		33		0.997452
1675		66		33	0.997452
1687		75	25		0.996473
1702	75		25		0.996473
1714			75	25	0.996473
1718			75	25	0.996473
1737		25		75	0.996473
1756		25		75	0.996473
1787	75	25			0.996473
1798	75		25		0.996473
1819	75			25	0.996473
1820			75	25	0.996473
1825		25		75	0.996473
1826	25		75		0.996473
1837	80			20	0.995493
1852		20		80	0.995493
1870		80		20	0.995493
1882		83		16	0.994512
1889	14			85	0.993533
1894	14			85	0.993533
1900		14		85	0.993533
1906		85		14	0.993533
1957		14		85	0.993533
1975		14		85	0.993533
1990	85		14		0.993533
2008		14		85	0.993533
2019		85	14		0.993533
2056		14		85	0.993533
2069	85		14		0.993533
2079	14		85		0.993533
2082	14		85		0.993533
2085	90		10		0.90298
2086	90		10		0.90298
2095	90			10	0.90298
2098	10		90		0.90298
2107		40		60	1.0
2108		10	90		0.90298
2120	90		10		0.90298
2121		90	10		0.90298
2126	90	10			0.90298
2127	10		90		0.90298
2137		12		87	0.992554
2141	87			12	0.992554
2150	12			87	0.992554
2191		16		83	0.994512
2200	66			16	0.988813
2203	83			16	0.994512
2206			80	20	0.995493
2209		80		20	0.995493
2219	80	20			0.995493
2250	33	66			0.997452
2251	66		33		0.997452
2255		33		66	0.997452
2257		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain