SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene305

Length: 2809 nt

UniGene Fasta

>sp_v3.0_unigene305
AGATGAAGTCCCTTGATTTGAGTTTCAACTATCTTTCGGGTACTATTCCAGCATCGCTTGGGTCTCTTCGGTATCTTCAGGATTTGGTCATGTGGTTGAACAAGCTTGAGGGGGTAATTCCAGATGAACTTTCAAATAGCCAGAGCCTAGAGAATCTGATCCTCGACAATAATTTCATCACGGGTAATATCCCCTCTAGTCTAAAAAATTGCACCAATCTTGTATGGCTCTCTCTTTCAAACAATAGGTTGACAGGTACTATCCCATCCTGGATTGGTCAGCTTGATAATCTTGCGATACTGCAGTTGGGAAATAATTCTTTATCTGGTACCATTCCTCCAGAGCTTGGAGACTGTAAAAGCTTGATATGGATAGATTTGAACAGCAATAAGCTGGATGGCAGTATTCCTGGTGAGCTATCAAAGCACTCTGGGAAAATTTCGGCTGGAAGTGTGTCGGGTAAGATGTATGCATTTGTGAGGAACGAAGGGGGAACTGCTTGTAGAGGGGCTGGAGGTCTTGTAGAATTTGCAGGGATTCGTCCTGAACAGATTTCTAGAGTGCCCGCGTTGCATTCTTGTCAATTCACCCGAGTCTACATGGGAACTACAATGTATCAGTTTAAAAATAATGGGACTCTGATTTTTCTCGATCTGTCATACAATATGCTTTCAGGAACCATTCCTGAAGAAATTGGTTCTATGTATTACTTACAAGTATTGAATCTTGGGCATAATAATCTCACTGGTAATATTCCATCCAGCTTGGGAGGAGTTAAGGAGGTCGGACTTTTAGATTTGTCTCATAACAATTTGCAAGGATTTATACCTCCGTCCTTATCTGGGCTATCTTTCATGGCAGACCTTGATGTTTCCAACAATAACCTCACAGGTTCAATCCCTTTATCCGGTCAACTTTCAACATTTCCTGCTTCAAGATATGAAAACAACTCAGGTCTATGTGGAGTGCCACTTCCGCCTTGCGCATATAATGATGGGACAGCAGACTCAGAGCATTCAAAGCCTCACAGAAAGCAGGCTTCTTTGGCCGCAAGTGTAGCCACGGGGTTTCTCGCTTCAATTTTCTGTATATTTTGCTTGATAGTGGTGGTAATTGAAAGCAGAAAGCACAAGAAAAAAGAGGATTTACGAGAAGTGTACATGGAAAGTTTGCCTAATTCAATGAATGGGAGCTGGAAGATTACAGGTGTACTAGAACCACTCAGTATCAATGTTGCAACCTTTGAAAAACCACTTAGGAAGCTTACTTTTGCTCATTTACTTGAAGCTACAAATGGGTTCAATGCAGATAGTTTGATTGGTTCGGGAGGATTTGGGGATGTATACAAAGCCCAGCTGAAAGATGGAACTGTTGTGGCAATCAAGAAACTTATTCATGTAAGTGGACAAGGAGATCGAGAATTCACAGCAGAAATGGAAACTATTGGTAAAATCAAACACCGGAATCTGGTTCCTCTGCTTGGCTACTGCAAAATTGGAGAAGAGAGACTACTTGTCTACGAATATATGCGTTGGGGAAGCTTGGACACTGTCTTACATAATCAGATGAAAGGAGGCATTAAACTTGATTGGTCTGCAAGGAAGAAGATTGCAATTGGGGCAGCTCGAGGTTTGGCTTTTCTTCACCATAGTTGCATTCCTCACATTATACACAGAGACATGAAATCAAGCAATGTCCTTCTTGACGAAAATCTTGAAGCGAGAGTTTCAGACTTTGGAATGGCAAGGCTCATGAATGCAATGGACACCCATCTGAGTGTCAGCACACTTGCAGGCACACCGGGATATGTTCCTCCAGAGTATTACCAGAGTTTTAGATGCACAACAAAGGGCGATGTTTACAGCTATGGAGTAATCTTGTTAGAGCTTCTCACAGGGAAACAGCCTACTGATTCTGTAGACTTTGGAGACAATAATCTGGTTGGATGGGTCAAACAACATGCCAAATTGAAAATCTCAGATGTTTTTGATCCAGACCTGATGAAAGATCCAAGCTTGGAAGTGGATCTACTTCAACATCTTAGAATTGCTTGTGAATGCTTGGATGATCGTCCTTGGCGTAGGCCTACTATGATTCAAGTATTGGCCATGTTTAGAGAGCTTCAAAAGGATGATGAGGACACGGAGCTTGACAGCTTCTCACTGGTAGATGTAAATGTTGAAGAACTTCCTGATCAACAAGTATGATCCCGTATTTTCTTCCCTATCATTGTTCACTCAATGCACAGATGTAAATGCAAAGAAAGCTCTTGAATGACACCTTTTTTTTGGCTCCTCCCTAAACTACCCCGCAGCTGTTTCTTTCTTTAGAGGATCAACAAGTATTTGCTCATCAAGCTCAAATACAATGGCACATATTTGCACCTTAGTCCTACCAAATGTAGATATTGAAGGAAGTTCCTAGGTCACTGTCAGCTGTTTAAGCTTTTTTCCTTCTCTTAATTCTTTCAATGCTGTCTTCTCTCTTTGTTCCCAGAGTGTGGACATTAGTCTGTTGCTTTTGGCACCCATAAGCACTATTAGCTTATCCGCAGCTGCATGTGCATGGTTTCAACGCTGAGATTTGCTTCTCATTGAATAGCTCTCAATCCTGCAGAGTGTTTGATAGAGGCTTTGGATTCTAATTATGGCAATGGTTTGGGATTTGTGTTACTGTTTTGTCTCTCTCAAATCAGAGAGATTGATGGGTGCTATGAATTCTACCTTGAACAGTGGAATTTATGCATTGTTCATTTTGAATGTACAGATAAATTAATAGAAATTATGGATTCCCACAATGGATCTTCTAG

Ace file of the UniGene sp_v3.0_unigene305

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Brassinosteroid receptor n=2 Tax=Glycine max RepID=C6FF79_SOYBN	-	-	0.0	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	45%
Sma3	Serine/threonine-protein kinase bri1, putative	-	-	1.654e-08	-

Source	ECs	Term	Type	e value	Identity
Sma3	Non-specific serine/threonine protein kinase.	EC:2.7.11.1	-	1.736e-07	-

Source	Gene names
Sma3	AT1G55610; AT2G01950; AT3G13380; AT4G39400; At1g55610; At2g01950; At3g13380; At4g39400; B1043F11.38; BRI1; BRL1; BRL3; Bri1; CLL4A; CURL3; F14H20.2; F20N2.4; F23K16.30; GSVIVT00003338001; GSVIVT00007369001; GSVIVT00019364001; GSVIVT00030658001; LKA; LOC_O

Source	GOs	Term	Type	Identity
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	endosome membrane	GO:0010008	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	protein complex	GO:0043234	Cellular Component	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	receptor activity	GO:0004872	Molecular Function	-
Sma3	steroid binding	GO:0005496	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	identical protein binding	GO:0042802	Molecular Function	-
Sma3	protein homodimerization activity	GO:0042803	Molecular Function	-
Sma3	protein heterodimerization activity	GO:0046982	Molecular Function	-
Sma3	microtubule bundle formation	GO:0001578	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	skotomorphogenesis	GO:0009647	Biological Process	-
Sma3	detection of brassinosteroid stimulus	GO:0009729	Biological Process	-
Sma3	auxin mediated signaling pathway	GO:0009734	Biological Process	-
Sma3	brassinosteroid mediated signaling pathway	GO:0009742	Biological Process	-
Sma3	positive regulation of flower development	GO:0009911	Biological Process	-
Sma3	response to UV-B	GO:0010224	Biological Process	-
Sma3	phloem transport	GO:0010233	Biological Process	-
Sma3	brassinosteroid homeostasis	GO:0010268	Biological Process	-
Sma3	leaf vascular tissue pattern formation	GO:0010305	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	Intradiol ring-cleavage dioxygenase, C-terminal	IPR000627	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Leucine-rich repeat 2	IPR013101	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT3G13380.1	BRL3 BRI1-like 3 chr3:4347240-4350734 FORWARD LENGTH=1164	66%
RefSeq	Arabidopsis thaliana	NP_187946.1	receptor-like protein kinase BRI1-like 3 [Arabidopsis thaliana]	66%
RefSeq	Populus trichocarpa	XP_002300597.1	predicted protein [Populus trichocarpa]	68%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LM41

Fln msg: your sequence is longer than subject: 735 - 613

Fln protein: MKSLDLSFNYLSGTIPASLGSLRYLQDLVMWLNKLEGVIPDELSNSQSLENLILDNNFITGNIPSSLKNCTNLVWLSLSNNRLTGTIPSWIGQLDNLAILQLGNNSLSGTIPPELGDCKSLIWIDLNSNKLDGSIPGELSKHSGKISAGSVSGKMYAFVRNEGGTACRGAGGLVEFAGIRPEQISRVPALHSCQFTRVYMGTTMYQFKNNGTLIFLDLSYNMLSGTIPEEIGSMYYLQVLNLGHNNLTGNIPSSLGGVKEVGLLDLSHNNLQGFIPPSLSGLSFMADLDVSNNNLTGSIPLSGQLSTFPASRYENNSGLCGVPLPPCAYNDGTADSEHSKPHRKQASLAASVATGFLASIFCIFCLIVVVIESRKHKKKEDLREVYMESLPNSMNGSWKITGVLEPLSINVATFEKPLRKLTFAHLLEATNGFNADSLIGSGGFGDVYKAQLKDGTVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMRWGSLDTVLHNQMKGGIKLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMNAMDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVILLELLTGKQPTDSVDFGDNNLVGWVKQHAKLKISDVFDPDLMKDPSLEVDLLQHLRIACECLDDRPWRRPTMIQVLAMFRELQKDDEDTELDSFSLVDVNVEELPDQQV*

Protein Length: 736

Fln nts: AGATGAAGTCCCTTGATTTGAGTTTCAACTATCTTTCGGGTACTATTCCAGCATCGCTTGGGTCTCTTCGGTATCTTCAGGATTTGGTCATGTGGTTGAACAAGCTTGAGGGGGTAATTCCAGATGAACTTTCAAATAGCCAGAGCCTAGAGAATCTGATCCTCGACAATAATTTCATCACGGGTAATATCCCCTCTAGTCTAAAAAATTGCACCAATCTTGTATGGCTCTCTCTTTCAAACAATAGGTTGACAGGTACTATCCCATCCTGGATTGGTCAGCTTGATAATCTTGCGATACTGCAGTTGGGAAATAATTCTTTATCTGGTACCATTCCTCCAGAGCTTGGAGACTGTAAAAGCTTGATATGGATAGATTTGAACAGCAATAAGCTGGATGGCAGTATTCCTGGTGAGCTATCAAAGCACTCTGGGAAAATTTCGGCTGGAAGTGTGTCGGGTAAGATGTATGCATTTGTGAGGAACGAAGGGGGAACTGCTTGTAGAGGGGCTGGAGGTCTTGTAGAATTTGCAGGGATTCGTCCTGAACAGATTTCTAGAGTGCCCGCGTTGCATTCTTGTCAATTCACCCGAGTCTACATGGGAACTACAATGTATCAGTTTAAAAATAATGGGACTCTGATTTTTCTCGATCTGTCATACAATATGCTTTCAGGAACCATTCCTGAAGAAATTGGTTCTATGTATTACTTACAAGTATTGAATCTTGGGCATAATAATCTCACTGGTAATATTCCATCCAGCTTGGGAGGAGTTAAGGAGGTCGGACTTTTAGATTTGTCTCATAACAATTTGCAAGGATTTATACCTCCGTCCTTATCTGGGCTATCTTTCATGGCAGACCTTGATGTTTCCAACAATAACCTCACAGGTTCAATCCCTTTATCCGGTCAACTTTCAACATTTCCTGCTTCAAGATATGAAAACAACTCAGGTCTATGTGGAGTGCCACTTCCGCCTTGCGCATATAATGATGGGACAGCAGACTCAGAGCATTCAAAGCCTCACAGAAAGCAGGCTTCTTTGGCCGCAAGTGTAGCCACGGGGTTTCTCGCTTCAATTTTCTGTATATTTTGCTTGATAGTGGTGGTAATTGAAAGCAGAAAGCACAAGAAAAAAGAGGATTTACGAGAAGTGTACATGGAAAGTTTGCCTAATTCAATGAATGGGAGCTGGAAGATTACAGGTGTACTAGAACCACTCAGTATCAATGTTGCAACCTTTGAAAAACCACTTAGGAAGCTTACTTTTGCTCATTTACTTGAAGCTACAAATGGGTTCAATGCAGATAGTTTGATTGGTTCGGGAGGATTTGGGGATGTATACAAAGCCCAGCTGAAAGATGGAACTGTTGTGGCAATCAAGAAACTTATTCATGTAAGTGGACAAGGAGATCGAGAATTCACAGCAGAAATGGAAACTATTGGTAAAATCAAACACCGGAATCTGGTTCCTCTGCTTGGCTACTGCAAAATTGGAGAAGAGAGACTACTTGTCTACGAATATATGCGTTGGGGAAGCTTGGACACTGTCTTACATAATCAGATGAAAGGAGGCATTAAACTTGATTGGTCTGCAAGGAAGAAGATTGCAATTGGGGCAGCTCGAGGTTTGGCTTTTCTTCACCATAGTTGCATTCCTCACATTATACACAGAGACATGAAATCAAGCAATGTCCTTCTTGACGAAAATCTTGAAGCGAGAGTTTCAGACTTTGGAATGGCAAGGCTCATGAATGCAATGGACACCCATCTGAGTGTCAGCACACTTGCAGGCACACCGGGATATGTTCCTCCAGAGTATTACCAGAGTTTTAGATGCACAACAAAGGGCGATGTTTACAGCTATGGAGTAATCTTGTTAGAGCTTCTCACAGGGAAACAGCCTACTGATTCTGTAGACTTTGGAGACAATAATCTGGTTGGATGGGTCAAACAACATGCCAAATTGAAAATCTCAGATGTTTTTGATCCAGACCTGATGAAAGATCCAAGCTTGGAAGTGGATCTACTTCAACATCTTAGAATTGCTTGTGAATGCTTGGATGATCGTCCTTGGCGTAGGCCTACTATGATTCAAGTATTGGCCATGTTTAGAGAGCTTCAAAAGGATGATGAGGACACGGAGCTTGACAGCTTCTCACTGGTAGATGTAAATGTTGAAGAACTTCCTGATCAACAAGTATGA___TCCCGTATTTTCTTCCCTATCATTGTTCACTCAATGCACAGATGTAAATGCAAAGAAAGCTCTTGAATGACACCTTTTTTTTGGCTCCTCCCTAAACTACCCCGCAGCTGTTTCTTTCTTTAGAGGATCAACAAGTATTTGCTCATCAAGCTCAAATACAATGGCACATATTTGCACCTTAGTCCTACCAAATGTAGATATTGAAGGAAGTTCCTAGGTCACTGTCAGCTGTTTAAGCTTTTTTCCTTCTCTTAATTCTTTCAATGCTGTCTTCTCTCTTTGTTCCCAGAGTGTGGACATTAGTCTGTTGCTTTTGGCACCCATAAGCACTATTAGCTTATCCGCAGCTGCATGTGCATGGTTTCAACGCTGAGATTTGCTTCTCATTGAATAGCTCTCAATCCTGCAGAGTGTTTGATAGAGGCTTTGGATTCTAATTATGGCAATGGTTTGGGATTTGTGTTACTGTTTTGTCTCTCTCAAATCAGAGAGATTGATGGGTGCTATGAATTCTACCTTGAACAGTGGAATTTATGCATTGTTCATTTTGAATGTACAGATAAATTAATAGAAATTATGGATTCCCACAATGGATCTTCTAG

Fln Alignment:

Contig305___MKSLDLSFNYLSGTIPASLGS-LRYLQDLVMWLNKLEGVIPDELSNSQSLENLILDNNFITGNIPSSLKNCTNLVWLSLSNNRLTGTIPS
B8LM41_____________MTSLTLSQNSLTGTIPKELCQWLPYLVTIDLSQNEFTGSIPAELHNCTYLNILRLNGNQLTGEIPWQLSRLDRLTELNVANNKLTGYIPS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain