SustainPineDB

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Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene210433

Length: 237 nt

UniGene Fasta

>sp_v3.0_unigene210433
CCATCAGATATCTGGACTACTTCAGAGATCTGATCAAGAGCTAGCTCTGAGAACAAGCTCTGTTCAGGTGATCCAAAGGGTTTTGGAAGTATCAAAATGACTTACTGGAAGTCAAAGGTGCTGCCAAAGATCAAGAAATATTTTGGCAAAGGAGATGCCAACAGCAAAGGGGCAGCAGAAGCTGCCAAATCCTTCAACAAGGCCAAGAATTCCATTGAAAAAGGAATTGAAGAGAAG

Ace file of the UniGene sp_v3.0_unigene210433

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam05558, DREPP, DREPP plasma membrane polypeptide	-	-	1.0e-11	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	61%

Source	Species	ID	Description	e value	Identity
ATG	Arabidoptis thaliana	AT4G20260.4	ATPCAP1, PCAP1 plasma-membrane associated cation-binding protein 1 chr4:10941593-10943227 FORWARD LENGTH=226	9.0e-11	55%
RefSeq	Arabidopsis thaliana	NP_001190779.1	plasma-membrane associated cation-binding protein 1 [Arabidopsis thaliana]	7.0e-11	55%
RefSeq	Populus trichocarpa	XP_002303722.1	predicted protein, partial [Populus trichocarpa]	4.0e-11	57%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NKB2

Fln msg: Distance to subject end: 177 aas, your sequence is shorter than subject: 47 - 223

Fln protein: MTYWKSKVLPKIKKYFGKGDANSKGAAEAAKSFNKAKNSIEKGIEEK

Protein Length: 48

Fln nts: CCATCAGATATCTGGACTACTTCAGAGATCTGATCAAGAGCTAGCTCTGAGAACAAGCTCTGTTCAGGTGATCCAAAGGGTTTTGGAAGTATCAAA_-_ATGACTTACTGGAAGTCAAAGGTGCTGCCAAAGATCAAGAAATATTTTGGCAAAGGAGATGCCAACAGCAAAGGGGCAGCAGAAGCTGCCAAATCCTTCAACAAGGCCAAGAATTCCATTGAAAAAGGAATTGAAGAGAAG

Fln Alignment:

Ac_Euler_7979___MTYWKSKVLPKIKKYFGKGDANSKGAAEAAKSFNKAKNSIEKGIEEK
A9NKB2________________MSYWKSKVLPKIKKYFDK-PSKKKAASEACITFEASKESIEKEIQEK

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain