SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene210360

Length: 983 nt

UniGene Fasta

Ace file of the UniGene sp_v3.0_unigene210360

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Os07g0683900 protein n=5 Tax=Oryza sativa RepID=Q6Z4N6_ORYSJ	-	-	40%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	84%
Sma3	Putative uncharacterized protein	-	-	-

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: C0PR00

Fln msg: STOP codon was not found. Distance to subject end: 111 aas, your sequence is shorter than subject: 283 - 361

Fln protein: MHNPFGHHHPEPQQPYQAPHGSQYPQPIQGEIVKIYCEANPDFFLAGRNGSVVMAPANESDPSQQWIMDTSWSVKAKDDEGFPAFALVNKATGQALRHGRAEKDKVTLGPYHPDDLNEAVLFTQSADVGKGHLNLDASAGDDKHHVALREGAEIVLCKWNKKESQKWKISPILGGEQSSFYPPQANVEPQGHTVRIHCEANPEFFLAARGDVHQQWIKVDSWGLRVKDEAGFPAFALVNKATRHALKHGDKEWDQIYLADYNHDKAEQAVLWTLSADVGNGYQ

Protein Length: 284

Fln nts: CAATGTGAAATCAAAACTATAGTGATTCCGCACAGATTTTAGCTACTTCAGGCGTTCCAACAATTCAGTGAGGAATCACTATAGTTTTGATTTCACATTGGTTTTAGCTGTTTTTATATCAGGTCTAAGAGA_-_ATGCATAACCCATTTGGACACCACCACCCTGAGCCCCAGCAGCCATATCAGGCTCCTCATGGGAGTCAGTATCCACAACCTATTCAAGGAGAGATTGTGAAGATATACTGTGAAGCCAATCCTGATTTCTTCTTGGCTGGTAGAAATGGCAGTGTTGTCATGGCTCCGGCAAATGAATCAGACCCAAGCCAGCAATGGATCATGGATACTTCATGGAGTGTGAAGGCCAAGGATGATGAAGGATTTCCTGCATTTGCCCTTGTAAACAAAGCTACAGGCCAGGCATTGAGGCATGGACGTGCAGAGAAGGATAAGGTCACCTTGGGTCCTTACCACCCAGATGATTTGAATGAGGCTGTGCTTTTCACCCAAAGTGCCGATGTGGGTAAGGGTCATCTTAATCTAGATGCTAGCGCTGGAGATGATAAGCATCATGTAGCCCTGCGTGAGGGAGCAGAGATTGTTCTGTGTAAGTGGAACAAGAAGGAGAGTCAGAAGTGGAAGATCAGCCCAATATTGGGTGGTGAGCAGAGTTCATTCTATCCACCACAGGCTAATGTCGAGCCACAAGGACATACGGTTAGGATCCATTGTGAAGCCAACCCAGAGTTTTTCTTGGCTGCTCGTGGTGATGTTCATCAGCAATGGATCAAAGTAGATTCATGGGGCCTTCGAGTCAAGGATGAAGCTGGCTTCCCAGCGTTTGCCTTGGTGAACAAGGCCACCAGACATGCTCTGAAACACGGGGATAAAGAATGGGACCAGATATACTTGGCAGATTATAATCATGACAAGGCAGAGCAGGCTGTTCTATGGACCTTAAGTGCAGATGTTGGAAATGGGTATCAATG

Fln Alignment:

uma_euler_32697___MHNPFGHHHPEPQQPYQAPHGSQYPQPIQGEIVKIYCEANPDFFLAGRNGSVVMAPANESDPSQQWIMDTSWSVKAKDDEGFPAFALVNKATGQALRHGRAEKDKVTLGPYHPDDLNEAVLFTQSADVGKG----------HLNLDASAGDDKHHVALREGAEIVLCKWNKKESQKWKISPILG---------GEQSSFYPPQANVEPQGHTVRIHCEANPEFFLAARGDV-----------HQQWIKVDSWGLRVKDEAGFPAFALVNKATRHALKHGDKEWDQIYLADYNHDKAEQAVLWTLSADVGNGYQ
C0PR00________________MHNPFGHHQPEPQQPYQAPHGGQYPPPIQGETVKIYCEANPDFLLASRNESVVMVPANESDPSQQWIMDTSWSVKAKDDAGFPAFALVNKATGQALRHGRSEKDKVTLGPYHPDDLNEAVLFTQSADVGKGYQCIRPVNNTHLNLDASAGDDKHHVALSEGTEIVLCKWNKKESQKWKISPILGSSHGAYPPRGEPSSFF-PQANVEPQGSTVRIHCEANPEFFLAARGDVAVLAPENPRDPHQQWIKVDSWGLRVKDEAGFPAFALVNKATRHALKHGDKEWDQIYLADYNHDKAEQSVLWTLSADVGNGYQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain