SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene3650

Length: 5676 nt

UniGene Fasta

>sp_v3.0_unigene3650
TGAGAGAAAGCAGTGACGAAGAGATGAAGGCAAAGAAGAAGAAGAGGAGAAAAAGGGACACTGAAGAAAACTATGAACTTGATGAAGATGATTATGAGTTGCTGCAGGAGGCCAATGTTACTGGCTTCCACCGTCCTAAGTCTGGTAGCAAGAAATTTAAGCGTCTAAAGAAAGCTGGAAGGAATGCTGATGTTGAGGAGGAGAAAACAGGCTTCTCTGATGAGGATGACTTGGAAGAAGGTGGTCATACGGGTTCCACTGCTGAAGAAAAATTGAAGCGTAGCTTGTTTGGTGATGATGAAGGAGTGCCCCCAGAAGATGTTGCAGAAGAGGAGCAACCCGAAGAAGAAGAGGAGGAGGACTTGGGAGAAGAAGATGAGATGGCAGATTTCATAGTCGATGAAGAAGAAGTCGATGAAAATGGTCTACCTGTGAGGAGGAAGAAGTCAAAGAAAAGAATGCCCAGGCAAGCACTGGGGATTTCATCTTCAGCTTTACAAGAAGCTCAAGATATATTTGGTGATGTTGATGAACTTTTGTCTCGTCGAAAGCAAGGTTTGAGAGCAAAGGGCGTGGATGGTGTGGAAGGGGTAGACGATGAAGGTTTCAAGAGATTGGAGGATGAGTTTGAGCCAAGTGTTTTGGCAGAGAAGTACATGACAGCAAAGGATGATCAGATTCGTGAAACTGATGTCCCTGAACGGTTTCAATTGTCTGAAGAGATATCAGGTCCAATTCCACACAATGAGAATACAGTACCCGAGGCAAAATGGATATATGAACAAACGTTTGGCTCATTAGCTGTACCAATGAGGATGGAGTTTCAACACATAGCAAAACTGGACAAGGAAGAAGTTGTGAAGGAGATTTCCAATGTGTTACAGATGTTTCATGATCAAAAATTAGAGGTTCCATTTATTGCTATGTATCGGAAAGAAAAGTGCCTTAATTTGCTTCGAGATGAAGAACAGGATTCAACAGACAATGCAGACAAAGATAAAAAGTCTAAATTGAAAATGTACAAGGCATTGTGGGCAATACAACTGTGGGATAGGAAGTGGCTTTTGCTTCAAAGGAGAAAGAATGCTCTTAAAGCATCTTATGAGAAGCGTGCTGCAGAAGAAGCACAGAGAGATGAAAATAAATTGAATATACTAGAATCAGTTTTACAGTCCCTTGTTAATGCAGAGTCTGAACGTATTGTCGATGACATTGATGCGAAGTTTAACTTGCATTTTCCAGCTGATGAAGTTGAGGTAGAAGAAGGCCAATTTAAAAGACCGAAACGCAAATCTTTGTACAGCATCTGTCGCAAATCTGGATTAGGAGGCCTGTCACAGAAGTTTAGTCTCAGTTCGGAGCAACTAGGCGAGAATCTGCAGTTAATGTACAAGAAACATGAAGTTGATGATGCCAGTGTGACACCAGAGGAAGTGGCTGCTGAGTTTTCTATGAGAGAATTTGGTGATTCTCAGTCAGTACTTAAAGGTGCCAGGCACATGGCAGCTGTAGAAATTAGTTGCGAGCCAACTGTTAAGGAATATGCTCGAAGTGTCTATATGGAAAAGGCATTGGTAACTACAAGGCCCACAGCTGATGGAGACAGTGCCATAGATTCCTTTCATAAATATGCAGGGGTGAAGTGGCTAGTTAACAAGCCACTTATTATGTTTGATGATGCCCAGTGGCTTCTCATTCAAAAGGCTGAAGAGGAGAAACTTCTACAGGTTACTATTGGTTTGCCTAAAGAAGTAATAGATGAAGATTTAATGGGGGAATTAGAAAGTCATTACCTAAGTGATGGGGTCAGCAGAGCTGCTCAGTTATGGAATGAGCAGCGCAAATTAATAGTAAAGGAAGCCTTGTCTCAGTACATTTTACCTAATATGGAGAAGGAAGCACGAATGATTCTAACGGCAAGGGCCAAAAGTTGGTTGGTTCAGGATTATGGCTTGAAGCTCTGGAAGAAAGCATCAGTTGCTTCCTTTAAGCGCGATAAGCAAGATGAAGACCATACTGATGAAGATTTAGAAACACGTGTGATGGGCTGCTGCCCGGGCTCTGCTAAAGATCCTACAACATTTGTGATGCTAGATTCTTCGGGTGAAGTAGTGGATACTCTTTTTATATCTAATTTCACCATTCGTTCAAAGAACCCTACACAGATAAAGAGAAAGGAAATTGATCAACAACGGTTCTTGAAATTTATGACGGATCATCGGCCTCATGTACTTGCTTTGGGAGCTTCCAACATTTATTGTAGGCACTTGAAGGAATGCATTTTTGAGACGATATTTAAGATGCTGGAGGAGCGTCCGCGTGAATTACCTGATGGCCTAGACAATTTAGCTGTGGTTTATGGCGATATGGTTCTGCCTAGCCTTTATGAGCAGTCCCGCATTTCCCAGGAGCAGTTACCGACACAAAAAGGTCCTGTCCGACGTGCCACAGCTCTTGGCAGGTATCTTCAAAATCCATTAGCTATGGTTGCAACGTTATGTGGTCCTGGCAGAGAGATATTATCATTAAAGCTTCATTCATTAGAACATTTCCTTAATCCAGATGAAAGATATGAAGCTATTGAACAGGTGATGGTTACAATAACCAATCAAGTTGGTGTTGATATAAACCTGGCTGCTTGCCATGAGTGGATGTTTTCCCCGCTGCAATTTGTATCAGGACTTGGACCGAGAAAAGCTGCATCCTTACAGAGGGCTATTTTAAGGGCAGGGCGTATTTATTCTCGTAGAGACTTATTGACCACCCTTGGAGCAATGAAGCGGCTTGTATTTATAAATGCTGCAGGTTTCTTGAGGGTTAGAGGGACTGGACAGGCGGCATCTGGTAATCATGTTATGGATCCATTGGATGATACCAGAATTCATCCCGAGTCATATGAACTAGCCAAAAAAATGGCTGAGGATGTATATTGTGAGGATGTGGGACAGGAGATAGAAGACATGGATGAAGAAGCACAGGAAATGGCAATTGAACATGTGAAAAGTCATCCCGATTTGCTTAAAGCCATTGATATTGTTGAATATGGCAGAAGTGTGGAGCAGCGAACAGGCGAGAGAAAAAACGAAACCCTGAGTGACATAAAAGTTGAGCTACTTCAAGGTTTTCAGGAATGGCGGCCTCAACATGATGCACCAAGTCAAGATGAGGAATTTTACTTGCTTACTGGAGAAAGTGAAGAGAGTCTTTCTGAAGGGAAGATTGTACAAGCAACTGTTCGTTTTGTTCAAAATAATCGTGTAGTATGTGATCTGGATTCAGGATTGACAGGAATGATTATGAAGGAAGAACTTTCTGATGATAGAGATATTGATCCAATAGAAAAGATCACTGAAGGCAGCATCCTTACGTGTCGGGTGAAAAGTATTCAGAAAGCAATGTACATAGTGGATTTGACTTGCAAAGCGAGTGAGTTAAGGGGTGATCATTGGCAGAGGGGACAGGTTAAGGATCCGTTCTATGCAAAAGATGAATCCCTTTTACACAGTGAGCAAGAAAAAGCAAAGAAAGAAAAGGAGCTTGCAAAGAAGTCTTTCAAATCCCGGATGATTGTGCATCCACGATTCCAGAACATTTCAGCAGAAGAAGCCACAGAGGCCCTTTCGGACAAGGATGCAGGAGAAAGTGTGATTCGCCCCAGCTACCGAGGACCATCTTATTTGACACTAACTTTGAAAGTCTGTGATGGAGTTTATGCTCACAAGGAAATTGTTGAGGGAGGCAAAGACCACAGGGATTTTACCACTTACCTTCGTCTCGGGAAAACACTATCGATTGGGGAAGACACTTTTGAAGATCTTGACGAGGTCATTGACAGATACGTGGACCCGCTAGTGAGCAAACTGAAGGAAATCCTTGCTTATAGGAAATTTAGAAGGGGCACAAAAGCAGAGGTTGATGATGTGTTGCGGAAAGAAAAATTTGAAAATCCAACAAGAATTCCATATTATTTATCTGTTTCACATGAACATCCTGGTGCATTTATTCTCTCTTATATCAGGGGCACAAATCCGCACCATGAGTATGTGGGGGTATATCCTAAAGGTTTCAAATTCAGAAAAAGGATGTTCGACAATCTTGACAAACTTATTGCGTATTTCCAGAAGCACATCAATGATCTTGTTCAGGATTCTCTTCCTCCAATAAGATCTGTTGCTGCAATGGTTCCCATGAAGAGCCCAGGCCCTGGAGGATCTGCAGGAGGAGGTGGTTCTGGTGGTTCGGTTGGCAGTGGCTGGGGAGGTTCTGCCACAAATAGTGGTGCAGGAGGGGACGGTGGATGGCAGGGCCACTCAGGTACAGATTGGGAGAGGTCCTCAACACCAGGTTCAAGGACAGGTGGGAATGATTTTAATCATAATAATGCTAGCAGTGGACCTCCAAGTGGTTTGCCTAGGCCACCCCATGGTCGTGATAGAGGTGGAGGAAGAGGCGGTGGTGGTCGGTTTGGCGGTTGGAATGAAGGAAGAGGAGGTGGTTTTGGTAGGGGCGGGAACGATGGTAGGGGGGGAAGTATGAGAGGTAGATGGAGTGATGATGGAGGAAATAGAAGGGGAAGAAATACTTTCAGGGATAGAGGTGTTGGAAGGGGATCATACGAGTCAAACACCAACACTAGATGGGGTCAAAGTCCTGACGCTAAAGATGCTGGTGGAAGCTTTAGTAACCAACAGGGGGGTGATGTATGGGCATCGAAAACTGATGAATGGGGCAGCAATTCAGGCAACAGGATTCAGGATTCTCCTGCTAGAGGAGGTTGGACCGTGAGCTCAGGCGAAAGCGGATGGAGCAAGCAAGGCAATGATGGGCATGATATTGGCAAGTTGAGTGATGGCTGGAACGCTGCCAAAATTAATGACCGAGATGCCACTTCTAAAGATAATGCAGGTGGATGGGACTCTGCTTCGAAGGGTGTTATTAGTGGGTGGGATTCAGAACCCATTAGTGGAAACAGTGGATGGGATGCCCCAATTAAAGCTGGTCACAATGATGGCAGAATGAATTCTGTCAAGAGCAGTGATAAGTCTAGCGTTGGGTGGGGTGGTACTGAAGCAGCCATGGGCCAGCATAGACAGGCTACAGCTGATGGCTGGGGTAGCACTGAAACAGTCAGGGGCCAGCATAGACAGGCTACAGCTGATGGCTGGGGTAGCACTGAAACTGTCAGGGGCCAGCACAGACAGGCTACAGCTGATGGCTGGGGTAGTACTGAAGCAGGCAGGGGCCAGCTTCAACAGGCCACAACTGATAGCTGGGGCATGGGTGGAGGAAAGGAAACTGATAGTGCGCCAAAAGGTTGGACAACAGAGACAGATGGATGGGGTGACGCAGCAGTTCATAAAGCAAATGCTGGTGGTAGCGGGTGGGTTTGATGGGAGAAGTGCAATGTTAGCCTGTTGTAAATATAATTAACTTGAATGCCCCAGTTTGGTGTTTTTGGTGTGGACTTAGATCAGTAAGTTTTAAGTTCAGGGGTAAAGAGGATTAAAAAGTATTTCTGGGCATTCATTTTGCAGTGTTCGTTTGAAGCAATTTTATGTATTGTCACCCTGCTCAAAGACGCGTTTCTTCTTCTCCCAAAAACTGAGATGGACTTTGACACTGTTCTTTTTAGATGATTTACTTATAAAAAGGTTTTGAAATTTATGTACATTTTGT

Ace file of the UniGene sp_v3.0_unigene3650

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	transcription elongation factor SPT6 [Arabidopsis thaliana] gb\|AEE34373.1\| transcription elongation factor SPT6 [Arabidopsis thaliana]	-	-	0.0	48%
FL-Next	sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	22%
Sma3	Global transcription factor group	-	-	3.735e-10	-

Source	Gene names
Sma3	At1g63210; At1g65440; F16M19.22; GSVIVT00008932001; GSVIVT00008944001; GSVIVT00008954001; GSVIVT00023321001; GTB1501; GTB901; GTB902; GTB903; MtrDRAFT_AC149050g22v1; OJ1579_G03.7; Os05g0494900; OsI_20456; OsJ_19048; PHYPADRAFT_118200; POPTRDRAFT_178311; P

Source	GOs	Term	Type	Identity
Sma3	transcription elongation regulator activity	GO:0003711	Molecular Function	-
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	translation elongation factor activity	GO:0003746	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	hydrolase activity, acting on ester bonds	GO:0016788	Molecular Function	-
Sma3	regulation of transcription from RNA polymerase II promoter	GO:0006357	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	SH2 domain	IPR000980	-	-
Sma3	Alcohol dehydrogenase, zinc-type, conserved site	IPR002328	-	-
Sma3	Ribosomal protein S1, RNA-binding domain	IPR003029	-	-
Sma3	YqgF/RNase H-like domain	IPR006641	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-
Sma3	Transcription elongation factor Spt6	IPR017072	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G65440.1	GTB1 global transcription factor group B1 chr1:24306945-24314327 REVERSE LENGTH=1647	50%
RefSeq	Arabidopsis thaliana	NP_176723.3	transcription elongation factor SPT6 [Arabidopsis thaliana]	50%
RefSeq	Populus trichocarpa	XP_002307949.1	global transcription factor group [Populus trichocarpa]	57%

Full-Lengther Next Prediction

Fln status: Putative N-terminus

Fln database: sp_plants

Fln subject: Q5D869

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 368 aas, No stop codon before M and low homology subject, your sequence is shorter than subject: 1789 - 1976

Fln protein: MKAKKKKRRKRDTEENYELDEDDYELLQEANVTGFHRPKSGSKKFKRLKKAGRNADVEEEKTGFSDEDDLEEGGHTGSTAEEKLKRSLFGDDEGVPPEDVAEEEQPEEEEEEDLGEEDEMADFIVDEEEVDENGLPVRRKKSKKRMPRQALGISSSALQEAQDIFGDVDELLSRRKQGLRAKGVDGVEGVDDEGFKRLEDEFEPSVLAEKYMTAKDDQIRETDVPERFQLSEEISGPIPHNENTVPEAKWIYEQTFGSLAVPMRMEFQHIAKLDKEEVVKEISNVLQMFHDQKLEVPFIAMYRKEKCLNLLRDEEQDSTDNADKDKKSKLKMYKALWAIQLWDRKWLLLQRRKNALKASYEKRAAEEAQRDENKLNILESVLQSLVNAESERIVDDIDAKFNLHFPADEVEVEEGQFKRPKRKSLYSICRKSGLGGLSQKFSLSSEQLGENLQLMYKKHEVDDASVTPEEVAAEFSMREFGDSQSVLKGARHMAAVEISCEPTVKEYARSVYMEKALVTTRPTADGDSAIDSFHKYAGVKWLVNKPLIMFDDAQWLLIQKAEEEKLLQVTIGLPKEVIDEDLMGELESHYLSDGVSRAAQLWNEQRKLIVKEALSQYILPNMEKEARMILTARAKSWLVQDYGLKLWKKASVASFKRDKQDEDHTDEDLETRVMGCCPGSAKDPTTFVMLDSSGEVVDTLFISNFTIRSKNPTQIKRKEIDQQRFLKFMTDHRPHVLALGASNIYCRHLKECIFETIFKMLEERPRELPDGLDNLAVVYGDMVLPSLYEQSRISQEQLPTQKGPVRRATALGRYLQNPLAMVATLCGPGREILSLKLHSLEHFLNPDERYEAIEQVMVTITNQVGVDINLAACHEWMFSPLQFVSGLGPRKAASLQRAILRAGRIYSRRDLLTTLGAMKRLVFINAAGFLRVRGTGQAASGNHVMDPLDDTRIHPESYELAKKMAEDVYCEDVGQEIEDMDEEAQEMAIEHVKSHPDLLKAIDIVEYGRSVEQRTGERKNETLSDIKVELLQGFQEWRPQHDAPSQDEEFYLLTGESEESLSEGKIVQATVRFVQNNRVVCDLDSGLTGMIMKEELSDDRDIDPIEKITEGSILTCRVKSIQKAMYIVDLTCKASELRGDHWQRGQVKDPFYAKDESLLHSEQEKAKKEKELAKKSFKSRMIVHPRFQNISAEEATEALSDKDAGESVIRPSYRGPSYLTLTLKVCDGVYAHKEIVEGGKDHRDFTTYLRLGKTLSIGEDTFEDLDEVIDRYVDPLVSKLKEILAYRKFRRGTKAEVDDVLRKEKFENPTRIPYYLSVSHEHPGAFILSYIRGTNPHHEYVGVYPKGFKFRKRMFDNLDKLIAYFQKHINDLVQDSLPPIRSVAAMVPMKSPGPGGSAGGGGSGGSVGSGWGGSATNSGAGGDGGWQGHSGTDWERSSTPGSRTGGNDFNHNNASSGPPSGLPRPPHGRDRGGGRGGGGRFGGWNEGRGGGFGRGGNDGRGGSMRGRWSDDGGNRRGRNTFRDRGVGRGSYESNTNTRWGQSPDAKDAGGSFSNQQGGDVWASKTDEWGSNSGNRIQDSPARGGWTVSSGESGWSKQGNDGHDIGKLSDGWNAAKINDRDATSKDNAGGWDSASKGVISGWDSEPISGNSGWDAPIKAGHNDGRMNSVKSSDKSSVGWGGTEAAMGQHRQATADGWGSTETVRGQHRQATADGWGSTETVRGQHRQATADGWGSTEAGRGQLQQATTDSWGMGGGKETDSAPKGWTTETDGWGDAAVHKANAGGSGWV*

Protein Length: 1790

Fln nts: TGAGAGAAAGCAGTGACGAAGAG_-_ATGAAGGCAAAGAAGAAGAAGAGGAGAAAAAGGGACACTGAAGAAAACTATGAACTTGATGAAGATGATTATGAGTTGCTGCAGGAGGCCAATGTTACTGGCTTCCACCGTCCTAAGTCTGGTAGCAAGAAATTTAAGCGTCTAAAGAAAGCTGGAAGGAATGCTGATGTTGAGGAGGAGAAAACAGGCTTCTCTGATGAGGATGACTTGGAAGAAGGTGGTCATACGGGTTCCACTGCTGAAGAAAAATTGAAGCGTAGCTTGTTTGGTGATGATGAAGGAGTGCCCCCAGAAGATGTTGCAGAAGAGGAGCAACCCGAAGAAGAAGAGGAGGAGGACTTGGGAGAAGAAGATGAGATGGCAGATTTCATAGTCGATGAAGAAGAAGTCGATGAAAATGGTCTACCTGTGAGGAGGAAGAAGTCAAAGAAAAGAATGCCCAGGCAAGCACTGGGGATTTCATCTTCAGCTTTACAAGAAGCTCAAGATATATTTGGTGATGTTGATGAACTTTTGTCTCGTCGAAAGCAAGGTTTGAGAGCAAAGGGCGTGGATGGTGTGGAAGGGGTAGACGATGAAGGTTTCAAGAGATTGGAGGATGAGTTTGAGCCAAGTGTTTTGGCAGAGAAGTACATGACAGCAAAGGATGATCAGATTCGTGAAACTGATGTCCCTGAACGGTTTCAATTGTCTGAAGAGATATCAGGTCCAATTCCACACAATGAGAATACAGTACCCGAGGCAAAATGGATATATGAACAAACGTTTGGCTCATTAGCTGTACCAATGAGGATGGAGTTTCAACACATAGCAAAACTGGACAAGGAAGAAGTTGTGAAGGAGATTTCCAATGTGTTACAGATGTTTCATGATCAAAAATTAGAGGTTCCATTTATTGCTATGTATCGGAAAGAAAAGTGCCTTAATTTGCTTCGAGATGAAGAACAGGATTCAACAGACAATGCAGACAAAGATAAAAAGTCTAAATTGAAAATGTACAAGGCATTGTGGGCAATACAACTGTGGGATAGGAAGTGGCTTTTGCTTCAAAGGAGAAAGAATGCTCTTAAAGCATCTTATGAGAAGCGTGCTGCAGAAGAAGCACAGAGAGATGAAAATAAATTGAATATACTAGAATCAGTTTTACAGTCCCTTGTTAATGCAGAGTCTGAACGTATTGTCGATGACATTGATGCGAAGTTTAACTTGCATTTTCCAGCTGATGAAGTTGAGGTAGAAGAAGGCCAATTTAAAAGACCGAAACGCAAATCTTTGTACAGCATCTGTCGCAAATCTGGATTAGGAGGCCTGTCACAGAAGTTTAGTCTCAGTTCGGAGCAACTAGGCGAGAATCTGCAGTTAATGTACAAGAAACATGAAGTTGATGATGCCAGTGTGACACCAGAGGAAGTGGCTGCTGAGTTTTCTATGAGAGAATTTGGTGATTCTCAGTCAGTACTTAAAGGTGCCAGGCACATGGCAGCTGTAGAAATTAGTTGCGAGCCAACTGTTAAGGAATATGCTCGAAGTGTCTATATGGAAAAGGCATTGGTAACTACAAGGCCCACAGCTGATGGAGACAGTGCCATAGATTCCTTTCATAAATATGCAGGGGTGAAGTGGCTAGTTAACAAGCCACTTATTATGTTTGATGATGCCCAGTGGCTTCTCATTCAAAAGGCTGAAGAGGAGAAACTTCTACAGGTTACTATTGGTTTGCCTAAAGAAGTAATAGATGAAGATTTAATGGGGGAATTAGAAAGTCATTACCTAAGTGATGGGGTCAGCAGAGCTGCTCAGTTATGGAATGAGCAGCGCAAATTAATAGTAAAGGAAGCCTTGTCTCAGTACATTTTACCTAATATGGAGAAGGAAGCACGAATGATTCTAACGGCAAGGGCCAAAAGTTGGTTGGTTCAGGATTATGGCTTGAAGCTCTGGAAGAAAGCATCAGTTGCTTCCTTTAAGCGCGATAAGCAAGATGAAGACCATACTGATGAAGATTTAGAAACACGTGTGATGGGCTGCTGCCCGGGCTCTGCTAAAGATCCTACAACATTTGTGATGCTAGATTCTTCGGGTGAAGTAGTGGATACTCTTTTTATATCTAATTTCACCATTCGTTCAAAGAACCCTACACAGATAAAGAGAAAGGAAATTGATCAACAACGGTTCTTGAAATTTATGACGGATCATCGGCCTCATGTACTTGCTTTGGGAGCTTCCAACATTTATTGTAGGCACTTGAAGGAATGCATTTTTGAGACGATATTTAAGATGCTGGAGGAGCGTCCGCGTGAATTACCTGATGGCCTAGACAATTTAGCTGTGGTTTATGGCGATATGGTTCTGCCTAGCCTTTATGAGCAGTCCCGCATTTCCCAGGAGCAGTTACCGACACAAAAAGGTCCTGTCCGACGTGCCACAGCTCTTGGCAGGTATCTTCAAAATCCATTAGCTATGGTTGCAACGTTATGTGGTCCTGGCAGAGAGATATTATCATTAAAGCTTCATTCATTAGAACATTTCCTTAATCCAGATGAAAGATATGAAGCTATTGAACAGGTGATGGTTACAATAACCAATCAAGTTGGTGTTGATATAAACCTGGCTGCTTGCCATGAGTGGATGTTTTCCCCGCTGCAATTTGTATCAGGACTTGGACCGAGAAAAGCTGCATCCTTACAGAGGGCTATTTTAAGGGCAGGGCGTATTTATTCTCGTAGAGACTTATTGACCACCCTTGGAGCAATGAAGCGGCTTGTATTTATAAATGCTGCAGGTTTCTTGAGGGTTAGAGGGACTGGACAGGCGGCATCTGGTAATCATGTTATGGATCCATTGGATGATACCAGAATTCATCCCGAGTCATATGAACTAGCCAAAAAAATGGCTGAGGATGTATATTGTGAGGATGTGGGACAGGAGATAGAAGACATGGATGAAGAAGCACAGGAAATGGCAATTGAACATGTGAAAAGTCATCCCGATTTGCTTAAAGCCATTGATATTGTTGAATATGGCAGAAGTGTGGAGCAGCGAACAGGCGAGAGAAAAAACGAAACCCTGAGTGACATAAAAGTTGAGCTACTTCAAGGTTTTCAGGAATGGCGGCCTCAACATGATGCACCAAGTCAAGATGAGGAATTTTACTTGCTTACTGGAGAAAGTGAAGAGAGTCTTTCTGAAGGGAAGATTGTACAAGCAACTGTTCGTTTTGTTCAAAATAATCGTGTAGTATGTGATCTGGATTCAGGATTGACAGGAATGATTATGAAGGAAGAACTTTCTGATGATAGAGATATTGATCCAATAGAAAAGATCACTGAAGGCAGCATCCTTACGTGTCGGGTGAAAAGTATTCAGAAAGCAATGTACATAGTGGATTTGACTTGCAAAGCGAGTGAGTTAAGGGGTGATCATTGGCAGAGGGGACAGGTTAAGGATCCGTTCTATGCAAAAGATGAATCCCTTTTACACAGTGAGCAAGAAAAAGCAAAGAAAGAAAAGGAGCTTGCAAAGAAGTCTTTCAAATCCCGGATGATTGTGCATCCACGATTCCAGAACATTTCAGCAGAAGAAGCCACAGAGGCCCTTTCGGACAAGGATGCAGGAGAAAGTGTGATTCGCCCCAGCTACCGAGGACCATCTTATTTGACACTAACTTTGAAAGTCTGTGATGGAGTTTATGCTCACAAGGAAATTGTTGAGGGAGGCAAAGACCACAGGGATTTTACCACTTACCTTCGTCTCGGGAAAACACTATCGATTGGGGAAGACACTTTTGAAGATCTTGACGAGGTCATTGACAGATACGTGGACCCGCTAGTGAGCAAACTGAAGGAAATCCTTGCTTATAGGAAATTTAGAAGGGGCACAAAAGCAGAGGTTGATGATGTGTTGCGGAAAGAAAAATTTGAAAATCCAACAAGAATTCCATATTATTTATCTGTTTCACATGAACATCCTGGTGCATTTATTCTCTCTTATATCAGGGGCACAAATCCGCACCATGAGTATGTGGGGGTATATCCTAAAGGTTTCAAATTCAGAAAAAGGATGTTCGACAATCTTGACAAACTTATTGCGTATTTCCAGAAGCACATCAATGATCTTGTTCAGGATTCTCTTCCTCCAATAAGATCTGTTGCTGCAATGGTTCCCATGAAGAGCCCAGGCCCTGGAGGATCTGCAGGAGGAGGTGGTTCTGGTGGTTCGGTTGGCAGTGGCTGGGGAGGTTCTGCCACAAATAGTGGTGCAGGAGGGGACGGTGGATGGCAGGGCCACTCAGGTACAGATTGGGAGAGGTCCTCAACACCAGGTTCAAGGACAGGTGGGAATGATTTTAATCATAATAATGCTAGCAGTGGACCTCCAAGTGGTTTGCCTAGGCCACCCCATGGTCGTGATAGAGGTGGAGGAAGAGGCGGTGGTGGTCGGTTTGGCGGTTGGAATGAAGGAAGAGGAGGTGGTTTTGGTAGGGGCGGGAACGATGGTAGGGGGGGAAGTATGAGAGGTAGATGGAGTGATGATGGAGGAAATAGAAGGGGAAGAAATACTTTCAGGGATAGAGGTGTTGGAAGGGGATCATACGAGTCAAACACCAACACTAGATGGGGTCAAAGTCCTGACGCTAAAGATGCTGGTGGAAGCTTTAGTAACCAACAGGGGGGTGATGTATGGGCATCGAAAACTGATGAATGGGGCAGCAATTCAGGCAACAGGATTCAGGATTCTCCTGCTAGAGGAGGTTGGACCGTGAGCTCAGGCGAAAGCGGATGGAGCAAGCAAGGCAATGATGGGCATGATATTGGCAAGTTGAGTGATGGCTGGAACGCTGCCAAAATTAATGACCGAGATGCCACTTCTAAAGATAATGCAGGTGGATGGGACTCTGCTTCGAAGGGTGTTATTAGTGGGTGGGATTCAGAACCCATTAGTGGAAACAGTGGATGGGATGCCCCAATTAAAGCTGGTCACAATGATGGCAGAATGAATTCTGTCAAGAGCAGTGATAAGTCTAGCGTTGGGTGGGGTGGTACTGAAGCAGCCATGGGCCAGCATAGACAGGCTACAGCTGATGGCTGGGGTAGCACTGAAACAGTCAGGGGCCAGCATAGACAGGCTACAGCTGATGGCTGGGGTAGCACTGAAACTGTCAGGGGCCAGCACAGACAGGCTACAGCTGATGGCTGGGGTAGTACTGAAGCAGGCAGGGGCCAGCTTCAACAGGCCACAACTGATAGCTGGGGCATGGGTGGAGGAAAGGAAACTGATAGTGCGCCAAAAGGTTGGACAACAGAGACAGATGGATGGGGTGACGCAGCAGTTCATAAAGCAAATGCTGGTGGTAGCGGGTGGGTTTGATGGGAGAAGTGCAATGTTAGCCTGTTGTAAATATAATTAACTTGAATGCCCCAGTTTGGTGTTTTTGGTGTGGACTTAGATCAGTAAGTTTTAAGTTCAGGGGTAAAGAGGATTAAAAAGTATTTCTGGGCATTCATTTTGCAGTGTTCGTTTGAAGCAATTTTATGTATTGTCACCCTGCTCAAAGACGCGTTTCTTCTTCTCCCAAAAACTGAGATGGACTTTGACACTGTTCTTTTTAGATGATTTACTTATAAAAAGGTTTTGAAATTTATGTACATTTTGT

Fln Alignment:

Contig3650___RDRGVGRGSYESNTNTRWGQSPDAKDAGGSFSNQQGGDVWASKTDEWGSNSGNRIQDSPARGGWTVSSGESGWSKQGNDGHDIGKLSDGWNAAKINDRDATSKDNAGGWDSASKGVIS----GWDSEPISGNSGWDAPIKAGHNDGRMNSVKSSDKSSVGWGGTEAAMGQHRQATADGWGSTETVRGQHRQATADGWGSTETVRGQHRQATADGWGSTEAGRGQLQQATTDSWGMGGGKETDSAPKGWTTETDG--WGDAAVHKANAGGSGWV*WEKCNV
Q5D869______________RDSALGEPKFEDSADFQ-NLHDEGKPSGANWEKSSSWDNGCSGGSEWGVSKSTGGEANP----------ESNWEKTTNVEKEDAWSS--WNTRK-DAQESSKSDSGGAWGIKTKDADADTTPNWETSPAPKDSIVPENNEPTSDVWGHKSVSDKSWDKKNWG-TESAPA--------AWGSTD----------AAVWGSSDK-KNSETESDAAAWGSRDKNNSDV--------GSGAGVLGPWNKKSSETESNGATWGSS--DKTKSGAAAWNSWDKKNI

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
2942			10	90	0.90298
2969	90			10	0.90298

SSRs (tot: 1)

Start position	End position	Sequence	Length
33	45	AAG AAG AAG AAG A	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain