SustainPineDB

Assembly Name: SustainPine v3.0

UniGene Name: sp_v3.0_unigene16

Length: 3247 nt

UniGene Fasta

>sp_v3.0_unigene16
GAAGAAGGAATAACTAGAATGCGAGGAGTGGTATTATCTGCTGGGAGAAGCCGAGGTTATCATAGTCATCGTAGGAGGTCGGATTAAGGAAGAAGACAAGTCAAGGATGCAAACCGAGTTGAAGTAGAAGAAGTCTTCGTCCAAAGCCAAGGGAACAAGGATACAAGAATTGAACGGAAGGAAGCGGGAAGCGGTTCAGTTGTGCTTCCACTAAAGATCCATTTTGTTGATCGCAGAGTTATGACCTAAGTTTGTCGGAAATCTGCATTGTCGACGATTTCTGAAGAAATATCGTGGGAAAGTGATTCCACTCATGGTCCTTTTGACCTACTGGATCAACAGATAAAATTGGATCTTCAAAATCAACAATAATGAATTAGGTTGCAGAAACATCATTCGGAACGAGGACGGCCGAGGGTTGCAGAAACATCATTCGGAACGATAACGGCCGAGGGTTGCAGAGGCCGAAATGCCGGGCATTTCAGAGACTTTACAATTGCCTGCGCCTGCGGGGGGAGGTGATTCTGCGGCTCCGGCCGCCGATACCAGCAAGGATATTGTTACTGTAGATAATGGAACAATTCAGAATCTCAGCAACTTAAGTCTGTCATCAACCCCTGCGTCGGTGGCCACACACACCAAAACCATCGGAATTATCCATCCTCCGCCAGACATTCGAAATATCGTGGATAAGACGGCACAGTTCGTTGCTCGCAATGGCCCAGAGTTCGAGAAGAGGATTTTGGCAAACGAAAAGAACAACGCCAAGTTCAATTTCTTGAACCCTAGCGACCCTTATCATGCTTATTACCAGCACCGCGTTTCGGAGTTCAAAGCGCAGCTGCAAGGTCCAGTCCAGCAGCGTTCGGCAACGGCTGGTGGTGCCCCAGCAGACGGTAGTCCGCCGGAGCCGGGTGCCGACAGGGCGGAGCCTGTGAAGAAATTTGATGTGACCGTGAAACCCGTTGCCAAAGTTCTCCAGCCTCCCGAGGCCGAGCAGTATACCGTTAGACTGCCAGAGGGCATCACGGGCGAAGAGTTGGATATCATCAAGCTCACTGCGCAGTTTGTTGCGAGGAATGGTAAGTCCTTCTTGACAGGATTGACGAGCCGAGAGATCAATAATCCCCAGTTTCATTTCCTGAAGCCCACTCACAGCATGTTCACCTTTTTTACCTCTCTTACGGATTCTTACTCCAAGGTTCTGATGCCTCCCAAGAGTTTGGTTGAGAAACTCAGGAAAGATACGGCAGACATGACAACCGTGCTCGAACGGTGCTTACATCGGCTCGAGTGGGAGCGGTCGCAGGAACAGGCGAGACAGAAGGCAGAGGATGAAATTGAGCAGGAGAGGATGCAGATGGCTATGATTGATTGGCATGATTTCGTTGTGGTGGAGACTATTGAGTTTGCTGATGCGTTGTTTGTGGTATTGCGAGCGGCGATGTCCGTTGCGGAGGTTCTTTTGCGACTCTGGGTTTTTGCGATTGCTTAGGCAGTGGTATGATTGCAGAGTCCGGGAAAGAAGTAGAGATGGAGATGGATGAAGAAGAGGTCCATCTGGTCGAAGAGAGCTTGAAGACATCGACTGGGGATGAAAATGCTGCCAAAGCACAAGCGCCCCCTCCGCCAATCGAGGAAACAGAGGCACCTATAAGGATTGTAAAGAACTGGAAGAGACCAGAAGAAAGGCTCCCAGCTGAAAAGGATCCAACCAAGTTTGTTGTCTCTCCGATCACTGGGGAACTGATTCCCATTAACGAGATGGCTGAACATATGCGGATTTCACTTATAGATCCAAAATATAAAGAACAGAAGGAAAGAATGATGGCTAAGCTTCGGGAGACAACCCTTGCCCCCGATGATGAAATCTCTCGAAACATCGTGGGACTTGCTCGAACTCGGCCCGATATTTTTGGTACAACAGAAGAGGAAGTCTCTAATGCGGTTAAGGCTGAAATAGAAAAGAAAAAAGAGGAGCCAAAGCAAGTCATTTGGGATGGTCATACTGGAAGCATTGGTCGCACTGCAAACCAGGCCATGTCCCAGAATGCTGGTGATGAACAGATGGATTTAAATAATAATGATGGGAGGACTCTTCCTGGTCCTGCTCCTCCTCCCAAAGCACCTCTTCCTCCCATCAGACCCCTTCCTCCTCCTCCTGGTCTGGCATTGAATATTCCTCGACCACCTCCAAATGCAATCCAGTATTCTGCTCCAGGGACATCCGTTCCTTCGATGGCACCTCCTCCGAGGCCTACTATTCTACCTACTCCCCCACTTCGACCACCTCCACCTCCTGTTAGTATGCCTCCTGCTCCACCTCAGCTTGTGAACAGGCCACCACCACCCCCTCCCCCAGCATCAATGCCACCTTCAATGGTTACGCCACCGCCACCGGGTTCACAATTCCCCCCTATGCCGCCTCCTAGACCATTTGCACCACCACCACCAGTTCCTCCACCATCTATGCCTATGATGCCACCACCTCCTCCTCCTCAAGGAATGCCTCCCCCACCACCACCAGAAGAGGCTCCACCACCACTTCCTGAAGAACCGGAGCCAAAGAGGCAAAAGATAGATGATATCCAACTCATTCCAGAAGACCAATTCTTGGCACAACATCCGGGATCTGTTCGCATATCTGTTTCTGTCCCCAATCTCGAAGAAGGAAATCTGAACGGGCAGATGCTGGAAGTTACAATACAGTCTCTATCTGAAACTATATCCAGTCTTAAGGAGAAGATTGCAGCAGAGGTTGCCTTACCTGCAAACAAACAAAAACTTAGTGGACGGGCAGGTTTTCTCAAGGACAACCTATCACTTGCATATTATAACATAGGGCCTGGAGAAACATTGACGTTGGCCCTGAGAGAACGTGGTGGTAGAAAACGATAGGCATGTAATTGACCACTGACATGATGTCAGAATAAAATTGATGATCGTGTCCGTAAGTTCTTTCGTTTATATTTATAATGTCCTGTAGGAAGCTTCATCTCTGGGCTTATTGAAAGCTTATGTTCTTTTTGACAAATTATGGAGAATATCTGCGAAGGTATCTTTGGTGAATGTTTTGTAATCATATCCCTTTACCTTTATAATGTCGTATAGAAAGCTTTGATTCTCTGGGCTCATTGAAGGCGTACTTGCTTTTTGATAAATTGCGGAGAATATTTGCTAAGATTTGTTTGGTGAACGTGTTGTAACTTGTAATCATATTCTTTTTTTGATGTCAATTCACCTTGGA

Ace file of the UniGene sp_v3.0_unigene16

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	splicing factor 3A subunit 1 [Arabidopsis thaliana] ref\|NP_001117289.1\| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp\|Q8RXF1.2\|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj\|BAE98583.1\| putative splicing factor [Arabidopsis t	-	-	0.0	64%
FL-Next	sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	64%
Sma3	Glycine-rich protein	-	-	1.501e-14	-

Source	Gene names
Sma3	AT1G14650; AT4g13340; AT4g22020; At1g05135; At1g14640; At1g14650; At2g15880; At2g32690; At2g36120; At3g17050; At3g19020; At3g20470; At4g01985; At4g13340; At5g07740/At5g07750; At5g12280; At5g38560; CHLREDRAFT_195673; CHLREDRAFT_196024; CHLREDRAFT_196816; F

Source	GOs	Term	Type	Identity
Sma3	extracellular region	GO:0005576	Cellular Component	-
Sma3	extracellular space	GO:0005615	Cellular Component	-
Sma3	cell wall	GO:0005618	Cellular Component	-
Sma3	U2-type spliceosomal complex	GO:0005684	Cellular Component	-
Sma3	cytoplasm	GO:0005737	Cellular Component	-
Sma3	plasma membrane	GO:0005886	Cellular Component	-
Sma3	plant-type cell wall	GO:0009505	Cellular Component	-
Sma3	membrane	GO:0016020	Cellular Component	-
Sma3	integral to membrane	GO:0016021	Cellular Component	-
Sma3	myosin complex	GO:0016459	Cellular Component	-
Sma3	outer membrane	GO:0019867	Cellular Component	-
Sma3	RNA binding	GO:0003723	Molecular Function	-
Sma3	motor activity	GO:0003774	Molecular Function	-
Sma3	actin binding	GO:0003779	Molecular Function	-
Sma3	metalloendopeptidase activity	GO:0004222	Molecular Function	-
Sma3	protein serine/threonine kinase activity	GO:0004674	Molecular Function	-
Sma3	protein tyrosine kinase activity	GO:0004713	Molecular Function	-
Sma3	phosphoprotein phosphatase activity	GO:0004721	Molecular Function	-
Sma3	structural constituent of cell wall	GO:0005199	Molecular Function	-
Sma3	calcium ion binding	GO:0005509	Molecular Function	-
Sma3	protein binding	GO:0005515	Molecular Function	-
Sma3	ATP binding	GO:0005524	Molecular Function	-
Sma3	hedgehog receptor activity	GO:0008158	Molecular Function	-
Sma3	zinc ion binding	GO:0008270	Molecular Function	-
Sma3	lipase activity	GO:0016298	Molecular Function	-
Sma3	nuclear mRNA splicing, via spliceosome	GO:0000398	Biological Process	-
Sma3	RNA processing	GO:0006396	Biological Process	-
Sma3	protein modification process	GO:0006464	Biological Process	-
Sma3	protein phosphorylation	GO:0006468	Biological Process	-
Sma3	lipid metabolic process	GO:0006629	Biological Process	-
Sma3	exocytosis	GO:0006887	Biological Process	-
Sma3	cellular cell wall organization	GO:0007047	Biological Process	-
Sma3	metabolic process	GO:0008152	Biological Process	-
Sma3	cellular component organization	GO:0016043	Biological Process	-
Sma3	actin cytoskeleton organization	GO:0030036	Biological Process	-
Sma3	vesicle docking	GO:0048278	Biological Process	-

Source	InterPros	Term	Type	Identity
Sma3	SWAP/Surp	IPR000061	-	-
Sma3	Glutamine amidotransferase, class-II	IPR000583	-	-
Sma3	ROK	IPR000600	-	-
Sma3	Ubiquitin	IPR000626	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Sterol-sensing domain	IPR000731	-	-
Sma3	Lipase, GDSL	IPR001087	-	-
Sma3	Flavodoxin, conserved site	IPR001226	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Myosin head, motor domain	IPR001609	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	Protein phosphatase 2C-like	IPR001932	-	-
Sma3	Thiolase	IPR002155	-	-
Sma3	Actin-binding FH2/DRF autoregulatory	IPR003104	-	-
Sma3	Patched	IPR003392	-	-
Sma3	Alphaherpesvirus glycoprotein E	IPR003404	-	-
Sma3	Pistil-specific extensin-like protein	IPR003882	-	-
Sma3	Outer membrane autotransporter barrel	IPR006315	-	-
Sma3	Extensin repeat	IPR006706	-	-
Sma3	Lipase, GDSL, active site	IPR008265	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Peptidase M11, gametolysin	IPR008752	-	-
Sma3	Exocyst complex component Sec10	IPR009976	-	-
Sma3	Glycine rich protein	IPR010800	-	-
Sma3	Leucine-rich repeat-containing N-terminal, type 2	IPR013210	-	-
Sma3	Peptidase M10B, serralysin, C-terminal	IPR013858	-	-
Sma3	Tensin phosphatase, C2 domain	IPR014020	-	-
Sma3	Domain of unknown function DUF1929	IPR015202	-	-
Sma3	Actin-binding FH2	IPR015425	-	-
Sma3	Galactose oxidase, beta-propeller	IPR015916	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-HAND 2	IPR018249	-	-

Source	Species	ID	Description	Identity
ATG	Arabidoptis thaliana	AT1G14650.1	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein chr1:5028077-5030520 FORWARD LENGTH=785	64%
RefSeq	Arabidopsis thaliana	NP_001117289.1	splicing factor 3A subunit 1 [Arabidopsis thaliana]	64%
RefSeq	Populus trichocarpa	XP_002310658.1	predicted protein [Populus trichocarpa]	72%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q8RXF1

Fln msg: Separated hits, possible frame ERROR between 1471 and 1663, and possible frame ERROR between 2073 and 2566,

Fln protein: MPGISETLQLPAPAGGGDSAAPAADTSKDIVTVDNGTIQNLSNLSLSSTPASVATHTKTIGIIHPPPDIRNIVDKTAQFVARNGPEFEKRILANEKNNAKFNFLNPSDPYHAYYQHRVSEFKAQLQGPVQQRSATAGGAPADGSPPEPGADRAEPVKKFDVTVKPVAKVLQPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFTFFTSLTDSYSKVLMPPKSLVEKLRKDTADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERMQMAMIDWHDFVVVETIEFADALFVVLRAAMSVAEVLLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVKNWKRPEERLPAEKDPTKFVVSPITGELIPINEMAEHMRISLIDPKYKEQKERMMAKLRETTLAPDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKEEPKQVIWDGHTGSIGRTANQAMSQNAGDEQMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKRQKIDDIQLIPEDQFLAQHPGSVRISVSVPNLEEGNLNGQMLEVTIQSLSETISSLKEKIAAEVALPANKQKLSGRAGFLKDNLSLAYYNIGPGETLTLALRERGGRKR*

Protein Length: 811

Fln nts: GAAGAAGGAATAACTAGAATGCGAGGAGTGGTATTATCTGCTGGGAGAAGCCGAGGTTATCATAGTCATCGTAGGAGGTCGGATTAAGGAAGAAGACAAGTCAAGGATGCAAACCGAGTTGAAGTAGAAGAAGTCTTCGTCCAAAGCCAAGGGAACAAGGATACAAGAATTGAACGGAAGGAAGCGGGAAGCGGTTCAGTTGTGCTTCCACTAAAGATCCATTTTGTTGATCGCAGAGTTATGACCTAAGTTTGTCGGAAATCTGCATTGTCGACGATTTCTGAAGAAATATCGTGGGAAAGTGATTCCACTCATGGTCCTTTTGACCTACTGGATCAACAGATAAAATTGGATCTTCAAAATCAACAATAATGAATTAGGTTGCAGAAACATCATTCGGAACGAGGACGGCCGAGGGTTGCAGAAACATCATTCGGAACGATAACGGCCGAGGGTTGCAGAGGCCGAA_-_ATGCCGGGCATTTCAGAGACTTTACAATTGCCTGCGCCTGCGGGGGGAGGTGATTCTGCGGCTCCGGCCGCCGATACCAGCAAGGATATTGTTACTGTAGATAATGGAACAATTCAGAATCTCAGCAACTTAAGTCTGTCATCAACCCCTGCGTCGGTGGCCACACACACCAAAACCATCGGAATTATCCATCCTCCGCCAGACATTCGAAATATCGTGGATAAGACGGCACAGTTCGTTGCTCGCAATGGCCCAGAGTTCGAGAAGAGGATTTTGGCAAACGAAAAGAACAACGCCAAGTTCAATTTCTTGAACCCTAGCGACCCTTATCATGCTTATTACCAGCACCGCGTTTCGGAGTTCAAAGCGCAGCTGCAAGGTCCAGTCCAGCAGCGTTCGGCAACGGCTGGTGGTGCCCCAGCAGACGGTAGTCCGCCGGAGCCGGGTGCCGACAGGGCGGAGCCTGTGAAGAAATTTGATGTGACCGTGAAACCCGTTGCCAAAGTTCTCCAGCCTCCCGAGGCCGAGCAGTATACCGTTAGACTGCCAGAGGGCATCACGGGCGAAGAGTTGGATATCATCAAGCTCACTGCGCAGTTTGTTGCGAGGAATGGTAAGTCCTTCTTGACAGGATTGACGAGCCGAGAGATCAATAATCCCCAGTTTCATTTCCTGAAGCCCACTCACAGCATGTTCACCTTTTTTACCTCTCTTACGGATTCTTACTCCAAGGTTCTGATGCCTCCCAAGAGTTTGGTTGAGAAACTCAGGAAAGATACGGCAGACATGACAACCGTGCTCGAACGGTGCTTACATCGGCTCGAGTGGGAGCGGTCGCAGGAACAGGCGAGACAGAAGGCAGAGGATGAAATTGAGCAGGAGAGGATGCAGATGGCTATGATTGATTGGCATGATTTCGTTGTGGTGGAGACTATTGAGTTTGCTGATGCGTTGTTTGTGGTATTGCGAGCGGCGATGTCCGTTGCGGAGGTTCTTTTGCGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGTAAAGAACTGGAAGAGACCAGAAGAAAGGCTCCCAGCTGAAAAGGATCCAACCAAGTTTGTTGTCTCTCCGATCACTGGGGAACTGATTCCCATTAACGAGATGGCTGAACATATGCGGATTTCACTTATAGATCCAAAATATAAAGAACAGAAGGAAAGAATGATGGCTAAGCTTCGGGAGACAACCCTTGCCCCCGATGATGAAATCTCTCGAAACATCGTGGGACTTGCTCGAACTCGGCCCGATATTTTTGGTACAACAGAAGAGGAAGTCTCTAATGCGGTTAAGGCTGAAATAGAAAAGAAAAAAGAGGAGCCAAAGCAAGTCATTTGGGATGGTCATACTGGAAGCATTGGTCGCACTGCAAACCAGGCCATGTCCCAGAATGCTGGTGATGAACAGATGGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAAGAGGCAAAAGATAGATGATATCCAACTCATTCCAGAAGACCAATTCTTGGCACAACATCCGGGATCTGTTCGCATATCTGTTTCTGTCCCCAATCTCGAAGAAGGAAATCTGAACGGGCAGATGCTGGAAGTTACAATACAGTCTCTATCTGAAACTATATCCAGTCTTAAGGAGAAGATTGCAGCAGAGGTTGCCTTACCTGCAAACAAACAAAAACTTAGTGGACGGGCAGGTTTTCTCAAGGACAACCTATCACTTGCATATTATAACATAGGGCCTGGAGAAACATTGACGTTGGCCCTGAGAGAACGTGGTGGTAGAAAACGATAG___GCATGTAATTGACCACTGACATGATGTCAGAATAAAATTGATGATCGTGTCCGTAAGTTCTTTCGTTTATATTTATAATGTCCTGTAGGAAGCTTCATCTCTGGGCTTATTGAAAGCTTATGTTCTTTTTGACAAATTATGGAGAATATCTGCGAAGGTATCTTTGGTGAATGTTTTGTAATCATATCCCTTTACCTTTATAATGTCGTATAGAAAGCTTTGATTCTCTGGGCTCATTGAAGGCGTACTTGCTTTTTGATAAATTGCGGAGAATATTTGCTAAGATTTGTTTGGTGAACGTGTTGTAACTTGTAATCATATTCTTTTTTTGATGTCAATTCACCTTGGA

Fln Alignment:

Contig16___QNLSNLSLSSTPASVATHTKTIGIIHPPPDIRNIVDKTAQFVARNGPEFEKRILANEKNNAKFNFLNPSDPYHAYYQHRVSEFKAQLQGPVQQRSATAGGAPAD---GSPPEPGADRAEP--VKKFDVTVKPVAKVLQPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFTFFTSLTDSYSKVLMPPKSLVEKLRKDTADMTTVLERCLHRLEWERSQEQARQKAEDEIEQERMQMAMIDWHDFVVVETIEFADALFVVLRAAMSVAEVLLRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVKNWKRPEERLPAEKDPTKFVVSPITGELIPINEMAEHMRISLIDPKYKEQKERMMAKLRETTLAPDDEISRNIVGLARTRPDIFGTTEEEVSNAV-XXXXXXXXXXXXQVIWDGHTGSIGRTANQAMSQNA-GDEQMDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKRQKIDDIQLIPEDQFLAQHPGSVRISVSVPNLEEGNLNGQMLEVTIQSLSETISSLKEKIAAEVALPANKQKLSGRAGFLKDNLSLAYYNIGPGETLTLALRERGGRKR
Q8RXF1____________QNNSNLA---PPAAVATHTRTIGIIHPPPDIRTIVEKTAQFVSKNGLEFEKRIIVSNEKNAKFNFLKSSDPYHAFYQHKLTEYRAQNKDGAQGTDDSDGTTDPQLDTGAADESEAGDTQPDLQAQFRIPSKP----LEAPEPEKYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLSNRENNNPQFHFMKPTHSMFTFFTSLVDAYSEVLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKELERVQMAMIDWHDFVVVESIDFADEEDEELPPPMTLDEVIRRxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVKNWKRPEDRIPTERDPTKVVISPITGELIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALSQNANGEEQGDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR

SNPs (tot: 29)

Position	A %	C %	G %	T %	Probability
1346	33		66		0.997452
1380	33			66	0.997452
1381	33		66		0.997452
1384	66			33	0.997452
2234		66		33	0.997452
2241		33		66	0.997452
2266	33		66		1.0
2292	66			33	1.0
2296		88		11	0.923564
2360	12	62			1.0
2394		14	85		0.993533
2398		85		14	0.993533
2405	16	83			0.994512
2418		80		20	0.995493
2429	16	83			0.994512
2434		66		33	1.0
2446	33		66		1.0
2454	83		16		0.994512
2493	60			40	1.0
2583		18	81		0.999994
2632		81		18	0.999994
2976			17	82	1.0
3000		87		6	0.993531
3140	90		10		0.90298
3183			85	14	0.993533
3184	14	85			0.993533
3185			14	85	0.993533
3234			25	75	0.996473
3240	25	75			0.996473

SSRs (tot: 4)

Start position	End position	Sequence	Length
2151	2163	TCC TCC TCC TCC T	13
2441	2454	CAC CAC CAC CAC CA	14
2488	2500	CCT CCT CCT CCT C	13
2515	2526	CCA CCA CCA CCA	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain