SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene26246

Length: 1148 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene26246

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gb\|AAD39300.1\|AC007576_23 Similar to mitochondrial carrier proteins [Arabidopsis thaliana] gb\|AAM61005.1\| putative mitochondrial uncoupling protein [Arabidopsis thaliana] gb\|ABG48467.1\|	-	-	75%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	mitochondrial uncoupling protein	-	-	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	0.0	80%

Source	InterPros	Term	Type	Identity
Sma3		IPR001993	-	-
Sma3	Mitochondrial brown fat uncoupling protein	IPR002030	-	-
Sma3	Mitochondrial carrier protein	IPR002067	-	-
Sma3	Adenine nucleotide translocator 1	IPR002113	-	-
Sma3	Mitochondrial substrate/solute carrier	IPR018108	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P2P8

Fln msg: Overlapping hits, possible frame ERROR between 481 and 481, and overlapping frame ERROR between 702 and 699,

Fln protein: MAVSEQKQQQRQLDSMPLRLALTCASAIVAETSTFPIDTTKTRLQLRVDSSSALKRQGSLQTALGIARQEGITALYKGLSPALIRHTFYTTIRIFSYEQLRNTAASGNKExxLPLHRKALIGGLSGIIGQVVASPADLIKVRMQADGRLVNPRYDGLADAFAKIVRAEGVAGLWRGVLPNVQxxxxVNMGELACYDQAKRAIVGRGICGDNVVAHTLASMMSGLSATALSCPADVVKTRMMNQAGEEYRGSVDCLVKTVRKEGAMALWKGFFPTWARLGPWQFVFWVSYEKFRGLAGLRPSNSMLVASGKLCNHLHVIEKYC*

Protein Length: 324

Fln nts: CGTGACCTTGGCTGTCACTCAGATTTTCTCATAATATTTGCTGATATTGCCGCTTGATGGTTTTTGGGGGTTATGATGGGTTTTATGATTGTCCAGGTACAGAATCGGGATTGATCTGTACAGGCTGTGCCGCTAAAGCTCTTTGGCC_-_ATGGCCGTGTCAGAGCAGAAACAGCAGCAGCGGCAATTGGATTCCATGCCTCTTCGCCTGGCCCTGACTTGCGCTTCCGCCATCGTAGCCGAGACGTCTACTTTCCCAATTGACACCACGAAAACCCGCTTGCAACTCCGCGTCGACTCCTCGTCTGCCCTTAAACGCCAGGGTTCACTCCAAACAGCCCTGGGGATTGCCCGTCAGGAGGGCATAACAGCCCTCTACAAGGGCCTCTCACCAGCCCTTATCCGCCACACATTTTACACTACCATCCGCATATTCTCCTACGAGCAACTCCGCAACACAGCAGCTTCTGGCAATAAAGAAxxxxxxCTGCCCCTTCACAGGAAGGCCCTCATCGGAGGCCTCTCCGGCATTATCGGTCAGGTCGTTGCGAGCCCTGCGGATCTTATTAAGGTCAGGATGCAGGCGGACGGTCGCTTGGTTAATCCCAGGTACGACGGATTGGCGGACGCGTTTGCGAAGATCGTGAGGGCGGAGGGCGTGGCTGGGCTCTGGAGGGGGGTTTTGCCAAATGTTCAGAGxxxxxxxxxGGTGAACATGGGGGAGTTGGCTTGCTATGACCAGGCCAAAAGGGCGATCGTCGGACGTGGGATTTGCGGGGATAATGTGGTCGCGCACACGCTGGCATCCATGATGTCCGGGCTTTCGGCCACTGCGCTGAGCTGCCCTGCTGACGTGGTGAAGACCAGGATGATGAACCAGGCCGGGGAGGAGTACAGAGGCTCTGTGGATTGCTTGGTGAAGACTGTGAGGAAGGAAGGGGCGATGGCTCTTTGGAAGGGCTTTTTCCCCACTTGGGCGAGGCTGGGGCCATGGCAGTTTGTCTTCTGGGTCTCTTACGAGAAGTTCCGTGGCCTCGCCGGGCTTCGTCCTTCTAACAGCATGCTAGTTGCATCAGGCAAGCTCTGTAATCACCTTCATGTTATAGAAAAATATTGCTGA___GTGATGGACTCTGCCAGTCTGAATTCTAGAAAC

Fln Alignment:

Contig26246___MAVSEQKQQQRQLDSMPLRLALTCASAIVAETSTFPIDTTKTRLQLRVDSSSALKRQGSLQTALGIARQEGITALYKGLSPALIRHTFYTTIRIFSYEQLRNTAASGNKENPLPLHRKALIGGLSGIIGQVVASPADLIKVRMQADGRLVNPRYDGLADAFAKIVRAEGVAGLWRGVLPNVQRAxLVNMGELACYDQAKRAIVGRGICGDNVVAHTLASMMSGLSATALSCPADVVKTRMMNQAGEEYRGSVDCLVKTVRKEGAMALWKGFFPTWARLGPWQFVFWVSYEKFRGLAGL
A9P2P8_______________MVVAEQKQQQRQLDSTPLRLALTCASAIVAETSTFPIDTTKTRLQLRIESSSALKRQGSLQTALGIARQEGITALYKGLPPALVRHTFYTTIRIFSYEQLRDTAASGHQENPLSLLSKALIGGLSGIIGQVVASPADLIKVRMQADGRMVNPRYSGLADAFAKIVRAEGVAGLWRGVLPNVQRAxLVNMGELACYDQAKRAIVGRGICGDNVVAHTLASMMSGLSATALSCPADVVKTRMMNQAGEEYRGSVDCLVKTVRKEGVMALWKGFFPTWARLGPWQFVFWVSYEEFRSIAGL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain