SustainPineDB

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Assembly info
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ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene26074

Length: 377 nt

Origin of reads: Biogeco3 v1

UniGene Fasta

>sp_v2.0_unigene26074
CACACGGATTGTTATAAAGGTGCAACACTTGCGAATGGAGACAATGATGCGTTATGATCTTCGTAATCTTGCTTGGGTTGCTCAGTTCCTGAAAAATAAGCTTCCCGTGGATCTTGAGCCAATAGTAAAAGAAATACAATCAACCATTCCCTTGGAGTTTGACTTTGAACGAGAAACTTGGTTTATGGAGACAATAAAGAGGAACCTTGAAAAGAATAATTTCAGACATATTGTATGCCCTACACCGTATTTAAACCTCTGCACAAAGCGCCTTATTGTCATGCAGAGATTGGATGGAATTCGCTTCACTCAGGTGCTTTGTCCCAATGCAAGTGAAGATCTTCTTGCCAGGATACCCGAGATGGTGAGGAGTATCC

Ace file of the UniGene sp_v2.0_unigene26074

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	protein kinase family protein [Arabidopsis thaliana] gb\|AEE84964.1\| protein kinase family protein [Arabidopsis thaliana]	-	-	4.0e-11	40%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	32%
Blast2go	protein kinase family protein	-	-	2.8026e-45	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast	GO:0009507	Cellular Component	2.8026e-45	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	ABC-1	IPR004147	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5AA81

Fln msg: Distance to subject end: 193 aas, your sequence is shorter than subject: 125 - 542

Fln protein: TRIVIKVQHLRMETMMRYDLRNLAWVAQFLKNKLPVDLEPIVKEIQSTIPLEFDFERETWFMETIKRNLEKNNFRHIVCPTPYLNLCTKRLIVMQRLDGIRFTQVLCPNASEDLLARIPEMVRSI

Protein Length: 126

Fln nts: CACACGGATTGTTATAAAGGTGCAACACTTGCGAATGGAGACAATGATGCGTTATGATCTTCGTAATCTTGCTTGGGTTGCTCAGTTCCTGAAAAATAAGCTTCCCGTGGATCTTGAGCCAATAGTAAAAGAAATACAATCAACCATTCCCTTGGAGTTTGACTTTGAACGAGAAACTTGGTTTATGGAGACAATAAAGAGGAACCTTGAAAAGAATAATTTCAGACATATTGTATGCCCTACACCGTATTTAAACCTCTGCACAAAGCGCCTTATTGTCATGCAGAGATTGGATGGAATTCGCTTCACTCAGGTGCTTTGTCCCAATGCAAGTGAAGATCTTCTTGCCAGGATACCCGAGATGGTGAGGAGTATCC

Fln Alignment:

Contig26074___IVIKVQHLRMETMMRYDLRNLAWVAQFLKNKLP----VDLEPIVKEIQSTIPLEFDFERETWFMETIKRNLEKNNF-RHIVCPTPYLNLCTKRLIVMQRLDGIRFTQV
D5AA81_______________VVIKVLKPGIEDFLIADLNFLYIVARTLEFLSPQVSRTSLVGIVGDIRESMLEEVDFQKEAANIESFRDYLETTGLTRQATAPKVYYHCSTKRVLTMQRLYGVPLTDL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain