SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene26044

Length: 693 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene26044

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	putative xyloglucan glycosyltransferase 6 [Arabidopsis thaliana] sp\|Q9SRT3.1\|CSLC6_ARATH RecName: Full=Probable xyloglucan glycosyltransferase 6; AltName: Full=Cellulose synthase-like protein C6; Short=AtCslC6 gb\|AAF02144.1\|AC009853_4 unknown protein [Ara	-	-	65%
FL-Next	tr=Cellulose synthase-like A1; Pinus taeda (Loblolly pine).	-	-	60%
Blast2go	protein	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	pollen tube development	GO:0048868	Biological Process	87%
Blast2go	transferase activity	GO:0016740	Molecular Function	87%
Blast2go	Golgi apparatus	GO:0005794	Cellular Component	87%

Source	InterPros	Term	Type	Identity
Sma3	Glycosyl transferase, family 2	IPR001173	-	-
Sma3	SecY protein	IPR002208	-	-
Sma3	Ribosomal protein L18/L5	IPR005484	-	-
Sma3	Inorganic pyrophosphatase	IPR008162	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-
Sma3	EGF-like region, conserved site	IPR013032	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
439	66			33	0.997452
453	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain