SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25847

Length: 945 nt

Origin of reads: Inia v1 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene25847

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	RING/U-box domain-containing protein [Arabidopsis thaliana] gb\|AAF79455.1\|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb\|AAL15335.1\| At1g19310/F18O14_14 [Arabidopsis thaliana] gb\|AAM51593.1\| At1g19310/F18O14_14 [Arabidopsis thaliana] gb\|AAM62463.1\| unknow	-	-	7.0e-25	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%
Blast2go	protein	-	-	4.58286e-35	71%

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Zinc finger, RING-type, conserved site	IPR017907	-	-
Sma3	Zinc finger, C3HC4 RING-type	IPR018957	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
367		25		75	0.996473
444	16		83		0.994512
584		33		66	0.997452
750		33		66	0.997452
751	66		33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain