SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25779

Length: 996 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene25779

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	MLO-like protein 4 n=3 Tax=Andropogoneae RepID=B6TXU3_MAIZE	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	41%
Blast2go	mlo-like protein 4	-	-	72%

Source	InterPros	Term	Type	Identity
Sma3	NIF system FeS cluster assembly, NifU, C-terminal	IPR001075	-	-
Sma3	Short-chain dehydrogenase/reductase SDR	IPR002198	-	-
Sma3	Glucose/ribitol dehydrogenase	IPR002347	-	-
Sma3	Transcription factor CBF/NF-Y/archaeal histone	IPR003958	-	-
Sma3	Mlo-related protein	IPR004326	-	-
Sma3	Histone-fold	IPR009072	-	-
Sma3		IPR015706	-	-
Sma3	NAD(P)-binding domain	IPR016040	-	-

Full-Lengther Next Prediction

SSRs (tot: 2)

Start position	End position	Sequence	Length
657	671	GAT GAT GAT GAT GAT	15
869	881	GAAT GAAT GAAT G	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain