SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25669

Length: 547 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene25669

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE	-	-	2.0e-17	69%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	65%
Blast2go	mads-box protein jointless-like	-	-	4.14309e-22	81%

Source	InterPros	Term	Type	Identity
Sma3	Serine hydroxymethyltransferase	IPR001085	-	-
Sma3	Transcription factor, MADS-box	IPR002100	-	-
Sma3	Transcription factor, K-box	IPR002487	-	-
Sma3	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	IPR015421	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
91		33	66	0.997452
324	88		11	0.923564
396	80		20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain