SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25416

Length: 746 nt

Origin of reads: Biogeco1 v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene25416

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	phospholipase C [Arabidopsis thaliana] gb\|AAC32238.1\| putative phospholipase C [Arabidopsis thaliana] dbj\|BAC22507.1\| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb\|AEC07902.1\| phospholipase C [Arabidopsis thaliana]	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	phospholipase c	-	-	83%

Source	InterPros	Term	Type	Identity
Sma3	Ammonium transporter	IPR001905	-	-
Sma3	Villin headpiece	IPR003128	-	-
Sma3	Gelsolin	IPR007122	-	-
Sma3	Gelsolin domain	IPR007123	-	-
Sma3	Phosphoesterase	IPR007312	-	-
Sma3		IPR010256	-	-
Sma3	Ammonium transporter, conserved site	IPR018047	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
356	81		18		0.999994
359		81	18		0.999994
505		12		87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain