SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25144

Length: 995 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene25144

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Chalcone synthase n=57 Tax=Pinaceae RepID=CHSY_PINSY	-	-	94%
FL-Next	sp=Chalcone synthase 7; Picea mariana (Black spruce) (Abies mariana).	-	-	70%
Blast2go	chalcone synthase	-	-	96%

Source	InterPros	Term	Type	Identity
Sma3	Chalcone/stilbene synthase, N-terminal	IPR001099	-	-
Sma3	Polyketide synthase, type III	IPR011141	-	-
Sma3	Chalcone/stilbene synthase, C-terminal	IPR012328	-	-
Sma3	Thiolase-like, subgroup	IPR016038	-	-
Sma3	Chalcone/stilbene synthase, active site	IPR018088	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q9M5M0

Fln msg: Warning!, your query overlaps and the subject is separated, your sequence is shorter than subject: 241 - 395

Fln protein: KAIKEWGSPSPRLLMSDYQLTKLLGLPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARxxVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAALIVGADPVPQVEKPCFELMWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLRATRQVLSESACVxxxDVGVLFGFGPGLTVETVVLRSVPLQ*

Protein Length: 242

Fln nts: CAAGGCCATCAAGGAGTGGGGCAGCCCAAGTCCAAGATTACTCATGTCGGACTATCAGCTGACAAAGCTTCTTGGCCTCCCCAGCGTTAAGAGAGTCATGATGTACCAACAGGGCTGCTTCGCCGGAGGCACCGTTCTCCGCGTCGCTAAAGATCTCGCCGAGAATAATCGGGGAGCTCGGxxxxxxGTCGTCTGCAGTGAAATCACGGCTGTCACATTCCGTGGCCCGTCCGACACTCACCTCGACAGTATGGTCGGCCAAGCCCTCTTCGGCGACGGTGCGGCTGCGCTCATCGTGGGAGCCGATCCTGTCCCTCAAGTGGAGAAGCCCTGTTTTGAGCTGATGTGGACTGCACAGACCATTCTTCCCGACAGCGACGGAGCCATTGACGGGCATCTCAGAGAGGTCGGCCTCACATTCCACCTTCTCAAGGACGTCCCGGGGCTCATCTCGAAGAACATCGAAAAAAGTCTGGTGGAGGCGTTCCAGCAGTTCGGAATCTCCGACTGGAACCAGTTATTCTGGATCGCCCACCCCGGAGGCCCTGCCATTCTGGATCAGGTGGAGGCAAAGCTGAATCTGGATCCCAAGAAACTGAGAGCGACGAGGCAAGTACTAAGCGAAAGCGCGTGCGTGCAxxxxxxGGATGTGGGAGTTCTGTTTGGATTCGGGCCGGGTCTCACTGTCGAAACAGTTGTCCTGAGGAGCGTTCCCCTGCAGTGATTGAAGGAGAACAGAATTCCAAAGCCAAATATTTGATTATTATGGGTAATGCTCGCTTTGCATGTGCACATCTCCATGAATAGGGTATCGTGCAATAGTTTGTTAAATTTTCCAATAAATTAAGCAATGAAGCCATCACAAATCTTCCGTTTTCGTCGTTTTCGTCCGTTCTCGAGATTCGTGTTAATATGATATCATATAGTGGTAGATGGAGGTTCTCACAAAGAATCAAACTGAAAATAGTAATCTCACATTTTCCGTATATATGATAAC

Fln Alignment:

Contig25144___KAIKEWGSPSPRLLM-------------SDYQLTKLLGL-PSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAALIVGADPVPQVEKPCFELMWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLRATRQVLSE-----SACVHFxxxxxxxxxxxxxxxxxxxxLDVGVLFGFGPGLTVETVVLRSVPLQ
Q9M5M0_______________KAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAALIVGADPIPQVEKPCFELMWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLRATRQVLSEYGNMSSACVHFxxxxxxxxxxxxxxxxxxxxLDVGVLFGFGPGLTVETVVLKSVPLQ

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain