SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25002

Length: 774 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene25002 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	oxidoreductase, acting on the CH-CH group of donors	-	-	1.0e-36	61%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	73%
Blast2go	uncharacterized protein	-	-	0.0	85%

Source	GOs	Term	Type	e value	Identity
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	85%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	0.0	85%

Source	InterPros	Term	Type	Identity
Sma3	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal	IPR001104	-	-
Sma3	Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain	IPR001179	-	-
Sma3	Protein of unknown function DUF1295	IPR010721	-	-

Full-Lengther Next Prediction

SNPs (tot: 11)

Position	A %	C %	G %	T %	Probability
716		66	33		0.997452
718			33	66	0.997452
719	33		66		0.997452
723		33		66	0.997452
724	66	33			0.997452
726	33	66			0.997452
728	66		33		0.997452
730	66	33			0.997452
731	33		66		0.997452
734	33		66		0.997452
735		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain