SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene25001

Length: 745 nt

Origin of reads: Biogeco1 v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene25001

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6P2_POPTR	-	-	2.0e-13	37%
FL-Next	sp=Helicase protein MOM1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	32%
Blast2go	chromatin remodeling complex subunit	-	-	3.45626e-14	52%

Source	GOs	Term	Type	e value	Identity
Blast2go	chromosome organization	GO:0051276	Biological Process	3.45626e-14	52%
Blast2go	chromatin silencing	GO:0006342	Biological Process	3.45626e-14	52%
Blast2go	intracellular organelle	GO:0043229	Cellular Component	3.45626e-14	52%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
312	14		85		0.993533
314		85	14		0.993533
315	85		14		0.993533
316			14	85	0.993533
491	16		83		0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain