SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene24955

Length: 1040 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene24955

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	alpha/beta-hydrolase-like protein [Arabidopsis thaliana] gb\|AAG52432.1\|AC018848_3 unknown protein; 13661-11359 [Arabidopsis thaliana] gb\|AAM20542.1\| unknown protein [Arabidopsis thaliana] gb\|AAN15592.1\| unknown protein [Arabidopsis thaliana] gb\|AEE36382.1	-	-	6.0e-30	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	39%
Blast2go	alpha beta fold family protein	-	-	2.41462e-33	63%

Source	InterPros	Term	Type	e value	Identity
Sma3	Alpha/beta hydrolase fold-1	IPR000073	-	0.0	-
Sma3	Epoxide hydrolase-like	IPR000639	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
262	75		25		0.996473
266		75	25		0.996473
267	75			25	0.996473
268	75		25		0.996473
270		25	75		0.996473
271	75	25			0.996473
275		75	25		0.996473
276	75		25		0.996473
278	75			25	0.996473
279		75	25		0.996473
280		75		25	0.996473
281	75	25			0.996473
285		25		75	0.996473
293		25	75		0.996473
298	80		20		0.995493
301		80	20		0.995493
302	80			20	0.995493
305		20	80		0.995493
307	80			20	0.995493
318		20		80	0.995493
462	33		66		1.0
603	88	11			0.923564
606			11	88	0.923564
607		88		11	0.923564
614	88	11			0.923564
615	88			11	0.923564
616			11	88	0.923564
617	88			11	0.923564
619	11		88		0.923564
620		11		88	0.923564
621	88			11	0.923564
623	11			88	0.923564
645	87		12		0.992554
743	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain