SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene24289

Length: 819 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene24289 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Water deficit inducible protein LP3-3 (Fragment) n=4 Tax=Pinus taeda RepID=Q41095_PINTA	-	-	3.0e-21	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	water-stress inducible protein 1	-	-	6.66335e-34	78%

Source	InterPros	Term	Type	e value	Identity
Sma3	ABA/WDS induced protein	IPR003496	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 66)

Position	A %	C %	G %	T %	Probability
279	9	86	4		0.999642
286	9		4	86	0.999642
290	90	9			0.999872
293		10	75	10	0.999571
296	11		83		0.999887
301		11		83	0.999887
302	11		88		0.999937
303			11	82	0.999919
304		17		82	1.0
305		17		82	1.0
306	17			82	1.0
307	17			82	1.0
308			17	82	1.0
310			5	23	1.0
312	17	82			1.0
314			17	82	1.0
315	17	82			1.0
316		17		82	1.0
377		50	50		1.0
378	50	50			1.0
379		50	50		1.0
384	46			53	1.0
385		53	46		1.0
389	41	58			1.0
390			41	58	1.0
399	41			58	1.0
648		88		11	0.923564
649		88	11		0.923564
650	11	88			0.923564
651	11	77	11		0.968132
652		88		11	0.923564
655	12		87		0.992554
657		12	87		0.992554
658		12	87		0.992554
659	12		87		0.992554
660	12	87			0.992554
662			12	87	0.992554
664		12		87	0.992554
665	12			87	0.992554
666		12	87		0.992554
668	12			87	0.992554
669		12		87	0.992554
670			12	87	0.992554
724		85	14		0.993533
726	14			85	0.993533
728	14			85	0.993533
731	85	14			0.993533
734		85	14		0.993533
736		14	85		0.993533
738	85	14			0.993533
741	85	14			0.993533
742	85		14		0.993533
749			16	16	0.988813
750	16		83		0.994512
752	66		33		1.0
753	83			16	0.994512
754		66	33		1.0
755	16			83	0.994512
756	83	16			0.994512
759		33	66		1.0
760	66	33			1.0
763			33	66	1.0
765		66		33	1.0
766	66	33			1.0
768	66	33			1.0
772			33	66	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain