SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene24196

Length: 987 nt

Origin of reads: Biogeco2 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene24196

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Water deficit inducible protein LP3-3 (Fragment) n=4 Tax=Pinus taeda RepID=Q41095_PINTA	-	-	1.0e-22	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	water-stress inducible protein 1	-	-	2.29015e-35	88%

Source	InterPros	Term	Type	e value	Identity
Sma3	ABA/WDS induced protein	IPR003496	-	0.0	-
Sma3	Sugar transporter, conserved site	IPR005829	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 66)

Position	A %	C %	G %	T %	Probability
324	11		88		0.923564
326	11			88	0.923564
327			88	11	0.923564
365	20			80	0.999996
397	87			12	0.992554
398		87		12	0.992554
399	75			25	1.0
400	75	25			1.0
403	12	12	12	62	0.962769
411		16	83		0.994512
414	83		16		0.994512
415		16		83	0.994512
416		16		83	0.994512
417	16		83		0.994512
419			83	16	0.994512
421	16	83			0.994512
425	66			33	1.0
426			83	16	0.994512
435	20		80		0.995493
437	83			16	0.994512
443		20	80		0.995493
444		20	80		0.995493
445	20		80		0.995493
446		20	20	60	0.99255
448	60		20	20	0.99255
449	25	75			0.996473
451	25			75	0.996473
452		25	75		0.996473
454			25	75	0.996473
466	66		33		0.997452
516	25		75		0.996473
519	25		75		0.996473
520		25		75	0.996473
521		25	75		0.996473
526		25		75	0.996473
527			75	25	0.996473
528			75	25	0.996473
531	25		75		0.996473
532			25	75	0.996473
534	50	25		25	0.995533
536			25	75	0.996473
559		50	50		1.0
560	50		50		1.0
562	50	50			1.0
565			50	50	1.0
566	50		50		1.0
567	50	50			1.0
568	50			50	1.0
569	50		50		1.0
573	50	50			1.0
575	12	12	50		1.0
576	12	25		62	1.0
577	25			75	1.0
579		12		87	0.992554
707		11		88	0.923564
709	88	11			0.923564
710	87	12			0.992554
713	12		87		0.992554
714			87	12	0.992554
715		12		87	0.992554
718	12		87		0.992554
719	12		87		0.992554
721	12		12	75	0.975346
829	14		85		0.993533
933	33		66		0.997452
935	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain