SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene23966

Length: 639 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene23966

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Aldehyde dehydrogenase n=1 Tax=Picea sitchensis RepID=A9NUC8_PICSI	-	-	82%
FL-Next	sp=Aldehyde dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	aldehyde dimeric nadp-preferring	-	-	81%

Source	GOs	Term	Type	Identity
Blast2go	response to water deprivation	GO:0009414	Biological Process	81%
Blast2go	response to abscisic acid stimulus	GO:0009737	Biological Process	81%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	81%
Blast2go	chloroplast	GO:0009507	Cellular Component	81%

Source	InterPros	Term	Type	Identity
Sma3	DNA methylase, N-6 adenine-specific, conserved site	IPR002052	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Aldehyde dehydrogenase NAD(P)-dependent	IPR012394	-	-
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-
Sma3	Aldehyde dehydrogenase, C-terminal	IPR016163	-	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
246	75			25	0.996473
248		75	25		0.996473
249	75		25		0.996473
361	90			10	0.90298
510			16	83	0.994512
511			83	16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain