SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene23744

Length: 1122 nt

Origin of reads: Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene23744

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Anthocyanidin synthase n=1 Tax=Ginkgo biloba RepID=B2M0X8_GINBI	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	anthocyanidin synthase	-	-	81%

Source	InterPros	Term	Type	Identity
Sma3	ArgE/DapE/ACY1/CPG2/YscS, conserved site	IPR001261	-	-
Sma3	Isopenicillin N synthase	IPR002283	-	-
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	-

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVW2

Fln msg: Separated hits, possible frame ERROR between 819 and 830, STOP codon was not found. Distance to subject end: 9 aas,

Fln protein: MAPARVESLALSGLAAIPAEYVRPVEERPTECVLNLKGGNEAEGPQIPVVDVAGWDSADEEIKKEIGRQVAEASRSWGVMQLLNHGISEILIERLQAAGKAFFDLPVEEKEKYANDHAAGKIAGYGSKLANNVSGQLEWEDYYFHLLWPEQRRDMTTWPKHPQEYIEVTDAYGRQIRKLVTKILATLSLDLGVEEDRMERVLGGENLEMQLKINYYPRCPQPELALGVEAHTDISALTFLLHNMVVAxxxxxDQVEILSNGKFKSGLHRGLVNKEKVRISWAVFCDPPKDAVIGPMKEMVDENNPPLFPAKTFQQHTDHKLFKKAQAQARPKPPKNSPSLPEVVRSTMR

Protein Length: 350

Fln nts: ATGGGGACACACCACATTGCTATTTATTGCTCTCTTCGTTCTAAAAGGATTGCTGAATTCTAGTTTCTAGTTATC_-_ATGGCACCAGCACGAGTGGAGAGCCTGGCATTGAGCGGCCTGGCCGCTATTCCTGCCGAGTACGTGAGACCAGTGGAGGAGAGGCCTACTGAGTGCGTTCTCAACTTGAAAGGAGGAAACGAAGCCGAAGGTCCGCAGATTCCGGTGGTAGACGTTGCCGGATGGGATTCTGCCGACGAGGAGATCAAGAAGGAGATCGGGCGTCAGGTGGCGGAGGCGAGCAGATCGTGGGGAGTGATGCAGCTGCTGAACCACGGCATATCTGAGATTCTGATAGAGCGGCTTCAGGCAGCCGGGAAGGCGTTCTTCGATCTCCCTGTTGAAGAGAAAGAGAAGTACGCGAATGACCACGCAGCGGGGAAGATAGCGGGGTACGGCTCCAAGCTCGCCAACAACGTCAGCGGTCAGCTTGAATGGGAAGATTACTATTTCCACCTGCTATGGCCTGAACAGCGCAGAGACATGACCACCTGGCCGAAGCACCCCCAAGAATACATCGAGGTGACAGACGCTTACGGTCGGCAGATACGGAAGCTTGTGACCAAAATCTTGGCCACGCTTTCGTTGGATCTGGGCGTGGAGGAAGACAGAATGGAGCGCGTGCTCGGCGGCGAAAATCTCGAAATGCAACTGAAAATAAATTACTATCCACGCTGTCCACAACCGGAGCTCGCTCTCGGAGTGGAGGCACACACCGACATCAGCGCACTCACATTTCTTCTGCATAACATGGTCGTGGCCTTxxxxxxxxxxxxCGACCAAGTAGAGATTTTGAGCAACGGGAAATTCAAGAGCGGGCTGCACAGAGGACTGGTCAACAAAGAGAAGGTGAGGATTTCTTGGGCTGTGTTCTGTGATCCGCCAAAGGATGCGGTGATCGGACCCATGAAGGAGATGGTGGACGAGAACAATCCTCCGTTGTTTCCGGCGAAGACCTTCCAACAGCACACCGATCATAAGCTGTTCAAGAAGGCCCAAGCCCAGGCGAGGCCCAAGCCACCAAAAAACTCGCCCAGTCTACCTGAGGTTGTACGGTCTACGATGCGATG

Fln Alignment:

Contig23744___MAPARVESLALSGLAAIPAEYVRPVEERPTECVLNLKGGNEAEGPQIPVVDVAGWDSADEEIKKEIGRQVAEASRSWGVMQLLNHGISEILIERLQAAGKAFFDLPVEEKEKYANDHAAGKIAGYGSKLANNVSGQLEWEDYYFHLLWPEQRRDMTTWPKHPQEYIEVTDAYGRQIRKLVTKILATLSLDLGVEEDRMERVLGGENLEMQLKINYYPRCPQPELALGVEAHTDISALTFLLHNMVVALxxxxDQVEILSNGKFKSGLHRGLVNKEKVRISWAVFCDPPKDAVIGPMKEMVDENNPPLFPAKTFQQHTDHKLFKKAQAQARPKPPK
A9NVW2_______________MAPARVESLALSGLAAIPPEYVRPVEERPTECVLKVKGV-EDEGPQIPVVDIAGWDSADEEIKKEIGRQVAKASREWGVMQLLNHGISEILIERLQAAGKAFFDLPVEEKEKYANDHAAGKIAGYGSKLANNASGQLEWEDYYFHLLWPEQRRDMTTWPKHPQEYIEVTDAYGREIRKLVTKILATLSSDLGVEEERLERVLGGENLEMQLKINYYPRCPQPELALGVEAHTDISALTFLLHNMVPGLxxxxDQVEILSNGKFTSGLHRGLVNKEKVRISWAVFCDPPKDALIGPMKEVVDESNPPLFPAKTFKEHTDHKLFKKAQAQAEAQAAK

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
606	10		90		0.90298
903	66			33	0.997452
904	66	33			0.997452
905		33	66		0.997452
906	33		66		0.997452
907		33		66	0.997452
908		33	66		0.997452
911		33	66		0.997452
912			66	33	0.997452
913	66	33			0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain