SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene23723

Length: 592 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene23723

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	pfam04030, ALO, D-arabinono-1,4-lactone oxidase	-	-	1.0e-08	28%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	85%
Blast2go	l-gulonolactone oxidase-like	-	-	0.0	67%

Source	InterPros	Term	Type	Identity
Sma3	FAD linked oxidase, N-terminal	IPR006094	-	-
Sma3	D-arabinono-1,4-lactone oxidase	IPR007173	-	-
Sma3	Plant-specific FAD-dependent oxidoreductase	IPR010030	-	-
Sma3	Protein-tyrosine phosphatase, active site	IPR016130	-	-
Sma3	FAD-binding, type 2	IPR016166	-	-
Sma3	FAD-linked oxidase, FAD-binding, subdomain 2	IPR016168	-	-

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
160	66			33	0.997452
162	66		33		0.997452
167	66	33			0.997452
169	66			33	0.997452
173	66	33			0.997452
174		66		33	0.997452
177		33		66	0.997452
178	33			66	0.997452
179	66	33			0.997452
213	80		20		0.995493
216		20	80		0.995493
218			75	25	0.996473
221	75	25			0.996473
223	75			25	0.996473
224		75		25	0.996473
225			25	75	0.996473
228	75			25	0.996473
229		75	25		0.996473
232	25		75		0.996473
233		25	75		0.996473
234			75	25	0.996473
236	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain