SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene23440

Length: 719 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene23440

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily	-	-	7.0e-05	27%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	83%
Blast2go	protein	-	-	0.0	79%

Source	InterPros	Term	Type	e value	Identity
Sma3	Drug/metabolite transporter	IPR000620	-	0.0	-
Sma3	Ribosomal protein L29, conserved site	IPR018254	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 54)

Position	A %	C %	G %	T %	Probability
107	33		66		0.997452
116		66	33		0.997452
125		25		75	0.996473
128		25		75	0.996473
129			25	75	0.996473
133		25	75		0.996473
134	75	25			0.996473
137	75		25		0.996473
138			25	75	0.996473
140	75			25	0.996473
141	75		25		0.996473
144		25	75		0.996473
146		25	75		0.996473
147	80			20	0.995493
148		20	80		0.995493
149	20		80		0.995493
150		80		20	0.995493
193	83	16			0.994512
197			16	83	0.994512
200		16	83		0.994512
201	83	16			0.994512
203	83			16	0.994512
204			16	83	0.994512
207			83	16	0.994512
209			83	16	0.994512
212		16		83	0.994512
213			83	16	0.994512
214	83	16			0.994512
234		16		83	0.994512
243	85	14			0.993533
245			85	14	0.993533
246		14	85		0.993533
247	85		14		0.993533
251	85	14			0.993533
253		85		14	0.993533
254	85			14	0.993533
255		85	14		0.993533
256			14	85	0.993533
257		14		85	0.993533
261		14	85		0.993533
262	14	85			0.993533
263		14		85	0.993533
265		14	85		0.993533
266	14			85	0.993533
309		63		36	1.0
331	33		66		1.0
368			44	55	1.0
374		11		88	0.923564
524		11		77	0.968132
526	88	11			0.923564
527	88	11			0.923564
528	88			11	0.923564
529	88			11	0.923564
530	88	11			0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain