SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene22947

Length: 666 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene22947

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	39%
Blast2go	basic 7s globulin 2 precursor small	-	-	1.72857e-15	61%

Full-Lengther Next Prediction

SNPs (tot: 34)

Position	A %	C %	G %	T %	Probability
80		66		33	0.997452
84	66			33	0.997452
88	66	33			0.997452
93	66	33			0.997452
95	66		33		0.997452
101		33	66		0.997452
102	33	66			0.997452
144	80	20			0.995493
145		80	20		0.995493
146	80			20	0.995493
149	80	20			0.995493
152		80		20	0.995493
158		80		20	0.995493
161	80	20			0.995493
162			80	20	0.995493
163		20		80	0.995493
343		10		90	0.90298
344			10	90	0.90298
346	90	10			0.90298
349			10	90	0.90298
350	10			90	0.90298
354	90			10	0.90298
356	90		10		0.90298
357	90		10		0.90298
358	90	10			0.90298
359			90	10	0.90298
360	90		10		0.90298
361	90			10	0.90298
362		10		90	0.90298
364		10		90	0.90298
366		10	90		0.90298
501	88			11	0.923564
527		16		83	0.994512
529		83		16	0.994512

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain