SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene22734

Length: 710 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene22734

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Triacylglycerol lipase 1, putative n=1 Tax=Ricinus communis RepID=B9RY83_RICCO	-	-	5.0e-38	36%
FL-Next	sp=Triacylglycerol lipase 2; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	37%
Blast2go	triacylglycerol lipase 2	-	-	0.0	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	defense response to insect	GO:0002213	Biological Process	0.0	60%
Blast2go	lipase activity	GO:0016298	Molecular Function	0.0	60%

Source	InterPros	Term	Type	e value	Identity
Sma3	Partial AB-hydrolase lipase domain	IPR006693	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
35	33	66			0.997452
36		66		33	0.997452
37	66		33		0.997452
39			33	66	0.997452
40			33	66	0.997452
193		14		85	0.993533
194	12			87	0.992554
195		87		12	0.992554
196	87		12		0.992554
198	87		12		0.992554
241	11		88		0.923564
286			87	12	0.992554
291		12	87		0.992554
422			85	14	0.993533
423			85	14	0.993533
516		33		66	0.997452
517		33		66	0.997452
520			33	66	0.997452
523			66	33	0.997452
527			33	66	0.997452
535	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain