SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene22628

Length: 670 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene22628

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative cytochrome P450 [Lolium rigidum]	-	-	2.0e-30	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	70%
Blast2go	secologanin synthase-like	-	-	5.21129e-41	81%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group II	IPR002402	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	Trehalose-phosphatase	IPR003337	-	-
Sma3	Glycoside hydrolase, family 16, active site	IPR008263	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	Hemopexin/matrixin, conserved site	IPR018486	-	-

Full-Lengther Next Prediction

SNPs (tot: 51)

Position	A %	C %	G %	T %	Probability
79	66	33			0.997452
80	66		33		0.997452
81		66		33	0.997452
85		33	66		0.997452
89		66	33		0.997452
90	66	33			0.997452
91	66			33	0.997452
92		66	33		0.997452
93		66		33	0.997452
97	66			33	0.997452
98	66	33			0.997452
119		80	20		0.995493
120	80			20	0.995493
121	80	20			0.995493
125	20	80			0.995493
127		20	80		0.995493
131	80		20		0.995493
136		80	20		0.995493
137		80		20	0.995493
138		20	80		0.995493
140		20		80	0.995493
141			80	20	0.995493
142		20	80		0.995493
143	20	80			0.995493
261		16	83		0.994512
263	83			16	0.994512
264		16		83	0.994512
267		83		16	0.994512
269	83		16		0.994512
276	33	50		16	1.0
277			83	16	0.994512
278			16	83	0.994512
279			16	83	0.994512
281	83			16	0.994512
282	83		16		0.994512
283	83			16	0.994512
284		16		83	0.994512
285	16			83	0.994512
286		16		83	0.994512
299		88	11		0.923564
300	88			11	0.923564
301		88	11		0.923564
302	11			88	0.923564
303		11		88	0.923564
305	88			11	0.923564
306		88		11	0.923564
309	88	11			0.923564
310			88	11	0.923564
312			88	11	0.923564
315			88	11	0.923564
362		12		87	0.992554

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain