SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene22515

Length: 799 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene22515

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Cyclic AMP receptor, putative n=1 Tax=Ricinus communis RepID=B9S014_RICCO	-	-	8.0e-31	62%
FL-Next	sp=G-protein coupled receptor 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	56%
Blast2go	g protein-coupled receptor	-	-	4.0048e-35	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	mitotic cell cycle	GO:0000278	Biological Process	4.0048e-35	72%
Blast2go	maintenance of seed dormancy	GO:0010231	Biological Process	4.0048e-35	72%
Blast2go	response to cytokinin stimulus	GO:0009735	Biological Process	4.0048e-35	72%
Blast2go	tyrosine biosynthetic process	GO:0006571	Biological Process	4.0048e-35	72%
Blast2go	flower development	GO:0009908	Biological Process	4.0048e-35	72%
Blast2go	L-phenylalanine biosynthetic process	GO:0009094	Biological Process	4.0048e-35	72%
Blast2go	response to low fluence blue light stimulus by blue low-fluence system	GO:0010244	Biological Process	4.0048e-35	72%
Blast2go	protein binding	GO:0005515	Molecular Function	4.0048e-35	72%
Blast2go	vacuolar membrane	GO:0005774	Cellular Component	4.0048e-35	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	GPCR, cAMP-type	IPR000848	-	0.0	-
Sma3	GPCR, family 2-like	IPR017981	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 58)

Position	A %	C %	G %	T %	Probability
82	33	33	33		0.997753
83			33	66	0.997452
86			33	66	0.997452
92	66	33			0.997452
95			33	66	0.997452
100		75	25		0.996473
101	50			25	0.995533
102		75	25		0.996473
103	25			75	0.996473
104		25	75		0.996473
105	25			75	0.996473
107	75	25			0.996473
108	75			25	0.996473
110		75	25		0.996473
113	75		25		0.996473
117	60		20		0.99255
119		40	60		1.0
120	80		20		0.995493
122			20	80	0.995493
123	20			80	0.995493
124		20		80	0.995493
125	80	20			0.995493
129	80		20		0.995493
130	80	20			0.995493
131		80		20	0.995493
132		80	20		0.995493
133	80			20	0.995493
136	80	20			0.995493
137			80	20	0.995493
138	80	20			0.995493
140	62	12		25	1.0
141	62	25	12		1.0
142	87			12	0.992554
143		12	87		0.992554
147	12			87	0.992554
148		12		87	0.992554
149		12		87	0.992554
156			12	87	0.992554
160	12			87	0.992554
161		12		87	0.992554
165	12			87	0.992554
166	12		87		0.992554
168		21		78	1.0
171		17		82	1.0
173			82	17	1.0
174	82		17		1.0
177	82	17			1.0
178			82	17	1.0
179		76		23	1.0
180	82		17		1.0
183		82		17	1.0
184			17	82	1.0
186		17	82		1.0
189		17	82		1.0
190			82	17	1.0
191		17	82		1.0
192	17	82			1.0
437		3		88	0.998862

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain