SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene22443

Length: 859 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene22443

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	dolichyl-phosphate beta-glucosyltransferase [Arabidopsis thaliana] gb\|AAL07006.1\| At2g39630/F12L6.29 [Arabidopsis thaliana] gb\|AAL77732.1\| At2g39630/F12L6.29 [Arabidopsis thaliana] gb\|AAM14922.1\| putative dolichyl-phosphate beta-glucosyltransferase [Arabi	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	28%
Blast2go	dolichyl-phosphate beta-glucosyltransferase	-	-	74%

Source	GOs	Term	Type	e value	Identity
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	0.0	74%

Source	InterPros	Term	Type	e value	Identity
Sma3	Glycosyl transferase, family 2	IPR001173	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
56	22	77			0.999999
58	22			77	0.999999
61		22		77	0.999999
62	22		77		0.999999
64	22	77			0.999999
65	22	77			0.999999
66			22	77	0.999999
68		22	77		0.999999
69		22	77		0.999999
74	22	77			0.999999
79	77			22	0.999999
104		10	90		0.90298
106	90			10	0.90298
107		10		90	0.90298
108			10	90	0.90298
114	90		10		0.90298
508			66	33	0.997452
581		33		66	0.997452
689			66	33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain