SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene22332

Length: 715 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene22332

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Caldesmon domain containing protein	-	-	2.0e-05	21%
FL-Next	tr=F17F16.3 protein; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	55%
Blast2go	uncharacterized protein	-	-	0.0	61%

Full-Lengther Next Prediction

SNPs (tot: 29)

Position	A %	C %	G %	T %	Probability
114	88	11			0.923564
116	88			11	0.923564
117		11	88		0.923564
119	88			11	0.923564
120		88	11		0.923564
121	11	88			0.923564
124	88			11	0.923564
125	88			11	0.923564
126	88		11		0.923564
128		11		88	0.923564
131	88			11	0.923564
132		11	88		0.923564
134		11		88	0.923564
348		71		28	1.0
402	50		50		1.0
428	85		14		0.993533
431	85			14	0.993533
432	85		14		0.993533
433	14			85	0.993533
437	85			14	0.993533
440	85		14		0.993533
441		14		85	0.993533
442		85		14	0.993533
444		85		14	0.993533
447		14	85		0.993533
448			85	14	0.993533
449		14	85		0.993533
496	58	41			1.0
654	75	25			0.996473

SSRs (tot: 1)

Start position	End position	Sequence	Length
326	337	AAG AAG AAG AAG	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain