SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene21774

Length: 739 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene21774

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative protease HhoA precursor [Arabidopsis thaliana]	-	-	2.0e-39	58%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	35%
Blast2go	protein	-	-	0.0	73%

Source	GOs	Term	Type	Identity
Blast2go	photosystem II repair	GO:0010206	Biological Process	73%
Blast2go	catalytic activity	GO:0003824	Molecular Function	73%
Blast2go	chloroplast thylakoid lumen	GO:0009543	Cellular Component	73%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S1/S6, chymotrypsin/Hap	IPR001254	-	-
Sma3	PDZ domain	IPR001478	-	-
Sma3	Peptidase S1C, HrtA/DegP2/Q/S	IPR001940	-	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
432	75		25		0.996473
534		25		75	0.996473
539	20	80			0.995493
541			20	80	0.995493
550	20		80		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain